RNA–Protein interactions for RNA: ENST00000451240.1

AC005550.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC005550.3, Length 3,743 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005550.3-201ENST00000451240 COL3A1P02461 1466 aaPredicted RBP4.39□□□□□ -1.71
AC005550.3-201ENST00000451240 ZBTB7BO15156 539 aaPredicted RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 TLL1O43897 1013 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 VARSP26640 1264 aaKnown RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 MCCD1P59942 119 aaPredicted RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 CCT2P78371 535 aaKnown RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 MLLT1Q03111 559 aaPredicted RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 SQSTM1Q13501 440 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 ZNF460Q14592 562 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 PLS1Q14651 629 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 TUSC1Q2TAM9 212 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 XAGE3Q8WTP9 111 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 TBC1D31Q96DN5 1066 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 MFSD3Q96ES6 412 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 AP1M1Q9BXS5 423 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 RSPH9Q9H1X1 276 aaPredicted RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 C9orf78Q9NZ63 289 aaPredicted RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 SALL2Q9Y467 1007 aaPredicted RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 CDK12Q9NYV4 1490 aaPredicted RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 PQBP1O60828 265 aaKnown RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 PPFIA3O75145 1194 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 FMR1Q06787 632 aaKnown RBP eCLIP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 ANKRD45Q5TZF3 282 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 DNAJB7Q7Z6W7 309 aaPredicted RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 IQCA1Q86XH1 822 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 ETFBKMTQ8IXQ9 262 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 GRAMD1CQ8IYS0 662 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 BTN2A2Q8WVV5 523 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 GTPBP4Q9BZE4 634 aaKnown RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 CSRNP2Q9H175 543 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 SUCOQ9UBS9 1254 aaKnown RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 FAM8A1Q9UBU6 413 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 LRFN2Q9ULH4 789 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 LMO7Q8WWI1 1683 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 FAM177BA6PVY3 158 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 DIAPH2O60879 1101 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 PYGLP06737 847 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 HALP42357 657 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 CRKP46108 304 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 PSMA6P60900 246 aaKnown RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 MTMR1Q13613 665 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 ICE2Q659A1 982 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 EP400NLQ6ZTU2 488 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 CCDC91Q7Z6B0 441 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 CATIPQ7Z7H3 387 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 EHBP1Q8NDI1 1231 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 BARD1Q99728 777 aaKnown RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 SDF4Q9BRK5 362 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 INO80BQ9C086 356 aaPredicted RBP4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 MIR1-1HGQ9H1L0 117 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 LATS2Q9NRM7 1088 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 PRKAG3Q9UGI9 489 aa4.38□□□□□ -1.71
AC005550.3-201ENST00000451240 SERTM1A2A2V5 107 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 GJB6O95452 261 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 IFIT1P09914 478 aaKnown RBP4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 RENBPP51606 427 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 PPP4CP60510 307 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 LRMPQ12912 555 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 TDGQ13569 410 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 RASA3Q14644 834 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 KIAA1211LQ6NV74 962 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 LRRC69Q6ZNQ3 347 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 RAB44Q7Z6P3 723 aaPredicted RBP4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 SCUBE3Q8IX30 993 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 ARMC2Q8NEN0 867 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 SKA1Q96BD8 255 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 FGD4Q96M96 766 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 KCTD15Q96SI1 283 aaPredicted RBP4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 TARS2Q9BW92 718 aaKnown RBP4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 UNC93B1Q9H1C4 597 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 TNKS2Q9H2K2 1166 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 CAAP1Q9H8G2 361 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 LRFN1Q9P244 771 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 GTF2A1LQ9UNN4 478 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 PDZRN3Q9UPQ7 1066 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 BRD4O60885 1362 aaPredicted RBP4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 ALG1L2C9J202 215 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 MEIS1O00470 390 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 APAF1O14727 1248 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 AP1G1O43747 822 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 PDGFAP04085 211 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 SRGAP2CP0DJJ0 459 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 WDR43Q15061 677 aaKnown RBP eCLIP4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 DDR2Q16832 855 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 KIAA0753Q2KHM9 967 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 CWF19L2Q2TBE0 894 aaKnown RBP4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 NBPF8Q3BBV2 869 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 CFAP100Q494V2 611 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 RRP12Q5JTH9 1297 aaKnown RBP4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 VHLLQ6RSH7 139 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 TEX11Q8IYF3 940 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 RHPN1Q8TCX5 695 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 L3MBTL2Q969R5 705 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 TBCBQ99426 244 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 BRD9Q9H8M2 597 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 CSADQ9Y600 493 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 PLEKHG2Q9H7P9 1386 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 SLC3A2P08195 630 aaKnown RBP4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 KRT9P35527 623 aa4.37□□□□□ -1.71
AC005550.3-201ENST00000451240 EPHB1P54762 984 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms