RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 TCRBV5S4A2TA0A5A2 114 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 APBB1O00213 710 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 CNMDO75829 334 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 MS4A1P11836 297 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 GUCY1A2P33402 732 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 MNX1P50219 401 aaPredicted RBP12.01□□□□□ -0.49
LINC01238-204ENST00000451070 RAB3GAP1Q15042 981 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 TTF1Q15361 905 aaPredicted RBP12.01□□□□□ -0.49
LINC01238-204ENST00000451070 ZYXQ15942 572 aaKnown RBP12.01□□□□□ -0.49
LINC01238-204ENST00000451070 CERKLQ49MI3 558 aaPredicted RBP12.01□□□□□ -0.49
LINC01238-204ENST00000451070 SLC9C2Q5TAH2 1124 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 MAP3K21Q5TCX8 1036 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 CLASRPQ8N2M8 674 aaKnown RBP12.01□□□□□ -0.49
LINC01238-204ENST00000451070 ACER1Q8TDN7 264 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 EDC3Q96F86 508 aaKnown RBP12.01□□□□□ -0.49
LINC01238-204ENST00000451070 PAWRQ96IZ0 340 aaKnown RBP12.01□□□□□ -0.49
LINC01238-204ENST00000451070 NUDT12Q9BQG2 462 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 PAGR1Q9BTK6 254 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 KIAA1683Q9H0B3 1180 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 DDX19BQ9UMR2 479 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 ZNF532Q9HCE3 1301 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 MYH7P12883 1935 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 MYH8P13535 1937 aa12.01□□□□□ -0.49
LINC01238-204ENST00000451070 BAZ2AQ9UIF9 1905 aaKnown RBP12.01□□□□□ -0.49
LINC01238-204ENST00000451070 RLFQ13129 1914 aa12□□□□□ -0.49
LINC01238-204ENST00000451070 GOLIM4O00461 696 aa12□□□□□ -0.49
LINC01238-204ENST00000451070 XRCC5P13010 732 aaKnown RBP12□□□□□ -0.49
LINC01238-204ENST00000451070 VCAM1P19320 739 aa12□□□□□ -0.49
LINC01238-204ENST00000451070 MAPK4P31152 587 aa12□□□□□ -0.49
LINC01238-204ENST00000451070 ABCB5Q2M3G0 1257 aa12□□□□□ -0.49
LINC01238-204ENST00000451070 MORN1Q5T089 497 aa12□□□□□ -0.49
LINC01238-204ENST00000451070 CATSPERGQ6ZRH7 1159 aa12□□□□□ -0.49
LINC01238-204ENST00000451070 GPR142Q7Z601 462 aa12□□□□□ -0.49
LINC01238-204ENST00000451070 GTF3C2Q8WUA4 911 aaPredicted RBP12□□□□□ -0.49
LINC01238-204ENST00000451070 SOCS4Q8WXH5 440 aa12□□□□□ -0.49
LINC01238-204ENST00000451070 DNAJC2Q99543 621 aaKnown RBP12□□□□□ -0.49
LINC01238-204ENST00000451070 FEZ1Q99689 392 aa12□□□□□ -0.49
LINC01238-204ENST00000451070 HMX1Q9NP08 348 aaPredicted RBP12□□□□□ -0.49
LINC01238-204ENST00000451070 NR2E3Q9Y5X4 410 aa12□□□□□ -0.49
LINC01238-204ENST00000451070 USP17L15C9J2P7 530 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 USP17L13C9JLJ4 530 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 USP17L11C9JVI0 530 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 USP17L18D6R9N7 530 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 USP17L22D6RA61 530 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 USP17L17D6RBQ6 530 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 USP17L19D6RCP7 530 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 USP17L20D6RJB6 530 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 EVI5O60447 810 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 RAB11FIP3O75154 756 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 HMMRO75330 724 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 POLR3DP05423 398 aaPredicted RBP11.99□□□□□ -0.49
LINC01238-204ENST00000451070 IFIT2P09913 472 aaKnown RBP11.99□□□□□ -0.49
LINC01238-204ENST00000451070 PRKAR2AP13861 404 aaKnown RBP11.99□□□□□ -0.49
LINC01238-204ENST00000451070 USP14P54578 494 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 USP17L24Q0WX57 530 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 SEPT2Q15019 361 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 CCL14Q16627 93 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 SLFNL1Q499Z3 407 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 NECAB2Q7Z6G3 386 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 LCORLQ8N3X6 602 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 ANKLE1Q8NAG6 615 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 SDR42E1Q8WUS8 393 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 CRNKL1Q9BZJ0 848 aaKnown RBP11.99□□□□□ -0.49
LINC01238-204ENST00000451070 CABP5Q9NP86 173 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 DCP1AQ9NPI6 582 aaPredicted RBP11.99□□□□□ -0.49
LINC01238-204ENST00000451070 RTN4Q9NQC3 1192 aaKnown RBP11.99□□□□□ -0.49
LINC01238-204ENST00000451070 RABGAP1Q9Y3P9 1069 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 FRMPD3Q5JV73 1810 aa11.99□□□□□ -0.49
LINC01238-204ENST00000451070 A0A1W2PRG0 241 aa11.98□□□□□ -0.49
LINC01238-204ENST00000451070 CHGBP05060 677 aa11.98□□□□□ -0.49
LINC01238-204ENST00000451070 CYP2D6P10635 497 aa11.98□□□□□ -0.49
LINC01238-204ENST00000451070 CACNB2Q08289 660 aaPredicted RBP11.98□□□□□ -0.49
LINC01238-204ENST00000451070 PDE3AQ14432 1141 aa11.98□□□□□ -0.49
LINC01238-204ENST00000451070 LBX2Q6XYB7 198 aa11.98□□□□□ -0.49
LINC01238-204ENST00000451070 PLEKHH3Q7Z736 793 aa11.98□□□□□ -0.49
LINC01238-204ENST00000451070 PAG1Q9NWQ8 432 aa11.98□□□□□ -0.49
LINC01238-204ENST00000451070 MCM9Q9NXL9 1143 aa11.98□□□□□ -0.49
LINC01238-204ENST00000451070 BTBD7Q9P203 1132 aa11.98□□□□□ -0.49
LINC01238-204ENST00000451070 OGDHLQ9ULD0 1010 aa11.98□□□□□ -0.49
LINC01238-204ENST00000451070 LAMA3Q16787 3333 aa11.97□□□□□ -0.49
LINC01238-204ENST00000451070 SPDYE16A6NNV3 312 aaPredicted RBP11.97□□□□□ -0.49
LINC01238-204ENST00000451070 ZKSCAN1P17029 563 aaPredicted RBP11.97□□□□□ -0.49
LINC01238-204ENST00000451070 ATP5JP18859 108 aa11.97□□□□□ -0.49
LINC01238-204ENST00000451070 ADD2P35612 726 aa11.97□□□□□ -0.49
LINC01238-204ENST00000451070 RGS2P41220 211 aa11.97□□□□□ -0.49
LINC01238-204ENST00000451070 C20orf194Q5TEA3 1177 aa11.97□□□□□ -0.49
LINC01238-204ENST00000451070 CCAR1Q8IX12 1150 aaKnown RBP11.97□□□□□ -0.49
LINC01238-204ENST00000451070 TRMT44Q8IYL2 757 aaKnown RBP11.97□□□□□ -0.49
LINC01238-204ENST00000451070 SLC44A5Q8NCS7 719 aa11.97□□□□□ -0.49
LINC01238-204ENST00000451070 DYNLL2Q96FJ2 89 aa11.97□□□□□ -0.49
LINC01238-204ENST00000451070 APBA2Q99767 749 aa11.97□□□□□ -0.49
LINC01238-204ENST00000451070 BOLA2Q9H3K6 86 aa11.97□□□□□ -0.49
LINC01238-204ENST00000451070 RPAP3Q9H6T3 665 aaPredicted RBP11.97□□□□□ -0.49
LINC01238-204ENST00000451070 ARMT1Q9H993 441 aa11.97□□□□□ -0.49
LINC01238-204ENST00000451070 RCAN3Q9UKA8 241 aa11.97□□□□□ -0.49
LINC01238-204ENST00000451070 PARP14Q460N5 1801 aa11.97□□□□□ -0.49
LINC01238-204ENST00000451070 A0A0G2JMZ2 1700 aa11.97□□□□□ -0.49
LINC01238-204ENST00000451070 SMIM22K7EJ46 135 aa11.96□□□□□ -0.49
LINC01238-204ENST00000451070 PRKAB2O43741 272 aa11.96□□□□□ -0.49
LINC01238-204ENST00000451070 MBD4O95243 580 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms