RNA–Protein interactions for RNA: ENST00000450271.5

PBRM1-217, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-217ENST00000450271 ERVK-24P63145 666 aa31.74■■■□□ 2.67
PBRM1-217ENST00000450271 Q3C1V9 767 aa31.74■■■□□ 2.67
PBRM1-217ENST00000450271 HABP4Q5JVS0 413 aaKnown RBP31.74■■■□□ 2.67
PBRM1-217ENST00000450271 PLXNB2O15031 1838 aa31.74■■■□□ 2.67
PBRM1-217ENST00000450271 USP17L15C9J2P7 530 aa31.73■■■□□ 2.67
PBRM1-217ENST00000450271 USP17L13C9JLJ4 530 aa31.73■■■□□ 2.67
PBRM1-217ENST00000450271 USP17L11C9JVI0 530 aa31.73■■■□□ 2.67
PBRM1-217ENST00000450271 USP17L18D6R9N7 530 aa31.73■■■□□ 2.67
PBRM1-217ENST00000450271 USP17L22D6RA61 530 aa31.73■■■□□ 2.67
PBRM1-217ENST00000450271 USP17L17D6RBQ6 530 aa31.73■■■□□ 2.67
PBRM1-217ENST00000450271 USP17L19D6RCP7 530 aa31.73■■■□□ 2.67
PBRM1-217ENST00000450271 USP17L20D6RJB6 530 aa31.73■■■□□ 2.67
PBRM1-217ENST00000450271 SMARCA5O60264 1052 aaPredicted RBP31.73■■■□□ 2.67
PBRM1-217ENST00000450271 MBD4O95243 580 aa31.73■■■□□ 2.67
PBRM1-217ENST00000450271 CYP2D6P10635 497 aa31.73■■■□□ 2.67
PBRM1-217ENST00000450271 USP17L24Q0WX57 530 aa31.73■■■□□ 2.67
PBRM1-217ENST00000450271 DEFB118Q96PH6 123 aa31.73■■■□□ 2.67
PBRM1-217ENST00000450271 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.73■■■□□ 2.674e-6■■■□□ 18.8
PBRM1-217ENST00000450271 FARP2O94887 1054 aaPredicted RBP31.72■■■□□ 2.67
PBRM1-217ENST00000450271 CHGBP05060 677 aa31.72■■■□□ 2.67
PBRM1-217ENST00000450271 CAPN2P17655 700 aa31.72■■■□□ 2.67
PBRM1-217ENST00000450271 VCAM1P19320 739 aa31.72■■■□□ 2.67
PBRM1-217ENST00000450271 CRISPLD2Q9H0B8 497 aa31.72■■■□□ 2.67
PBRM1-217ENST00000450271 H0YGN5 161 aa31.71■■■□□ 2.67
PBRM1-217ENST00000450271 PRKAB2O43741 272 aa31.71■■■□□ 2.67
PBRM1-217ENST00000450271 MAPK4P31152 587 aa31.71■■■□□ 2.67
PBRM1-217ENST00000450271 SEPT2Q15019 361 aa31.71■■■□□ 2.67
PBRM1-217ENST00000450271 UBE3CQ15386 1083 aa31.71■■■□□ 2.67
PBRM1-217ENST00000450271 CATSPERGQ6ZRH7 1159 aa31.71■■■□□ 2.67
PBRM1-217ENST00000450271 PAGR1Q9BTK6 254 aa31.71■■■□□ 2.67
PBRM1-217ENST00000450271 PORCNQ9H237 461 aa31.71■■■□□ 2.67
PBRM1-217ENST00000450271 SLC44A5Q8NCS7 719 aa31.7■■■□□ 2.67
PBRM1-217ENST00000450271 SOCS4Q8WXH5 440 aa31.7■■■□□ 2.67
PBRM1-217ENST00000450271 TRIB2Q92519 343 aa31.7■■■□□ 2.67
PBRM1-217ENST00000450271 NUDT12Q9BQG2 462 aa31.7■■■□□ 2.67
PBRM1-217ENST00000450271 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.7■■■□□ 2.67
PBRM1-217ENST00000450271 ATP8A2Q9NTI2 1148 aa31.7■■■□□ 2.67
PBRM1-217ENST00000450271 RABGAP1Q9Y3P9 1069 aa31.7■■■□□ 2.67
PBRM1-217ENST00000450271 CNMDO75829 334 aa31.69■■■□□ 2.66
PBRM1-217ENST00000450271 TFRCP02786 760 aaKnown RBP31.69■■■□□ 2.66
PBRM1-217ENST00000450271 TRIM32Q13049 653 aa31.69■■■□□ 2.66
PBRM1-217ENST00000450271 HTATIP2Q9BUP3 242 aa31.69■■■□□ 2.66
PBRM1-217ENST00000450271 DCTPP1Q9H773 170 aa31.69■■■□□ 2.66
PBRM1-217ENST00000450271 XRCC5P13010 732 aaKnown RBP31.68■■■□□ 2.66
PBRM1-217ENST00000450271 CYP2B6P20813 491 aa31.68■■■□□ 2.66
PBRM1-217ENST00000450271 LBX2Q6XYB7 198 aa31.68■■■□□ 2.66
PBRM1-217ENST00000450271 GPR142Q7Z601 462 aa31.68■■■□□ 2.66
PBRM1-217ENST00000450271 USP6NLQ92738 828 aa31.68■■■□□ 2.66
PBRM1-217ENST00000450271 DPF3Q92784 378 aa31.68■■■□□ 2.66
PBRM1-217ENST00000450271 DYNLL2Q96FJ2 89 aa31.68■■■□□ 2.66
PBRM1-217ENST00000450271 SWAP70Q9UH65 585 aa31.68■■■□□ 2.66
PBRM1-217ENST00000450271 A0A1W2PRG0 241 aa31.67■■■□□ 2.66
PBRM1-217ENST00000450271 RPTORQ8N122 1335 aa31.67■■■□□ 2.66
PBRM1-217ENST00000450271 MPHOSPH10O00566 681 aaKnown RBP31.66■■■□□ 2.66
PBRM1-217ENST00000450271 MORN1Q5T089 497 aa31.66■■■□□ 2.66
PBRM1-217ENST00000450271 RPAP3Q9H6T3 665 aaPredicted RBP31.66■■■□□ 2.66
PBRM1-217ENST00000450271 ECHDC1Q9NTX5 307 aa31.66■■■□□ 2.66
PBRM1-217ENST00000450271 COLQQ9Y215 455 aaPredicted RBP31.66■■■□□ 2.66
PBRM1-217ENST00000450271 MYH7P12883 1935 aa31.65■■■□□ 2.66
PBRM1-217ENST00000450271 MAP3K21Q5TCX8 1036 aa31.65■■■□□ 2.66
PBRM1-217ENST00000450271 TMEM179Q6ZVK1 233 aa31.65■■■□□ 2.66
PBRM1-217ENST00000450271 PLEKHH3Q7Z736 793 aa31.65■■■□□ 2.66
PBRM1-217ENST00000450271 SMIM22K7EJ46 135 aa31.64■■■□□ 2.66
PBRM1-217ENST00000450271 C12orf60Q5U649 245 aa31.64■■■□□ 2.66
PBRM1-217ENST00000450271 ZSCAN25Q6NSZ9 544 aa31.64■■■□□ 2.66
PBRM1-217ENST00000450271 CCAR1Q8IX12 1150 aaKnown RBP31.64■■■□□ 2.66
PBRM1-217ENST00000450271 PUS7LQ9H0K6 701 aaKnown RBP31.64■■■□□ 2.66
PBRM1-217ENST00000450271 HMX1Q9NP08 348 aaPredicted RBP31.64■■■□□ 2.66
PBRM1-217ENST00000450271 BAZ2AQ9UIF9 1905 aaKnown RBP31.64■■■□□ 2.66
PBRM1-217ENST00000450271 RANBP2P49792 3224 aaKnown RBP31.64■■■□□ 2.65
PBRM1-217ENST00000450271 TRIOBPQ9H2D6 2365 aa31.63■■■□□ 2.65
PBRM1-217ENST00000450271 CYP2D7A0A087X1C5 515 aa31.63■■■□□ 2.65
PBRM1-217ENST00000450271 SPDYE16A6NNV3 312 aaPredicted RBP31.63■■■□□ 2.65
PBRM1-217ENST00000450271 USP17L12C9JPN9 530 aa31.62■■■□□ 2.65
PBRM1-217ENST00000450271 USP17L21D6R901 530 aa31.62■■■□□ 2.65
PBRM1-217ENST00000450271 AKR1B1P15121 316 aa31.62■■■□□ 2.65
PBRM1-217ENST00000450271 RGS2P41220 211 aa31.62■■■□□ 2.65
PBRM1-217ENST00000450271 CCNA1P78396 465 aa31.62■■■□□ 2.65
PBRM1-217ENST00000450271 TRMT44Q8IYL2 757 aaKnown RBP31.62■■■□□ 2.65
PBRM1-217ENST00000450271 BTBD7Q9P203 1132 aa31.62■■■□□ 2.65
PBRM1-217ENST00000450271 SLC4A4Q9Y6R1 1079 aa31.62■■■□□ 2.65
PBRM1-217ENST00000450271 SIAH1Q8IUQ4 282 aa31.61■■■□□ 2.65
PBRM1-217ENST00000450271 PRKAR2AP13861 404 aaKnown RBP31.6■■■□□ 2.65
PBRM1-217ENST00000450271 ZKSCAN1P17029 563 aaPredicted RBP31.6■■■□□ 2.65
PBRM1-217ENST00000450271 CDK8P49336 464 aa31.6■■■□□ 2.65
PBRM1-217ENST00000450271 KIAA1755Q5JYT7 1200 aa31.6■■■□□ 2.65
PBRM1-217ENST00000450271 C16orf86Q6ZW13 317 aa31.6■■■□□ 2.65
PBRM1-217ENST00000450271 APBA2Q99767 749 aa31.6■■■□□ 2.65
PBRM1-217ENST00000450271 CLEC10AQ8IUN9 316 aa31.59■■■□□ 2.65
PBRM1-217ENST00000450271 AMOTL1Q8IY63 956 aa31.59■■■□□ 2.65
PBRM1-217ENST00000450271 KBTBD3Q8NAB2 608 aa31.59■■■□□ 2.65
PBRM1-217ENST00000450271 ANKLE1Q8NAG6 615 aa31.59■■■□□ 2.65
PBRM1-217ENST00000450271 DIS3LQ8TF46 1054 aaKnown RBP31.59■■■□□ 2.65
PBRM1-217ENST00000450271 DDRGK1Q96HY6 314 aa31.59■■■□□ 2.65
PBRM1-217ENST00000450271 PAWRQ96IZ0 340 aaKnown RBP31.59■■■□□ 2.65
PBRM1-217ENST00000450271 CCDC17Q96LX7 622 aa31.59■■■□□ 2.65
PBRM1-217ENST00000450271 CCL14Q16627 93 aa31.58■■■□□ 2.65
PBRM1-217ENST00000450271 TSHZ3Q63HK5 1081 aa31.58■■■□□ 2.65
PBRM1-217ENST00000450271 CTR9Q6PD62 1173 aa31.58■■■□□ 2.65
PBRM1-217ENST00000450271 GPATCH3Q96I76 525 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms