RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ABL1P00519 1130 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 SSBP05455 408 aaKnown RBP eCLIP9.7□□□□□ -0.86
LSM5-208ENST00000450169 PDE4BQ07343 736 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 CDCA2Q69YH5 1023 aaPredicted RBP9.7□□□□□ -0.86
LSM5-208ENST00000450169 PPFIBP1Q86W92 1011 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 FUKQ8N0W3 1084 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 ACRBPQ8NEB7 543 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 SAAL1Q96ER3 474 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 THOC1Q96FV9 657 aaKnown RBP9.7□□□□□ -0.86
LSM5-208ENST00000450169 CCDC114Q96M63 670 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 EPN3Q9H201 632 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 ACTR5Q9H9F9 607 aaPredicted RBP9.7□□□□□ -0.86
LSM5-208ENST00000450169 BATF3Q9NR55 127 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 BMP2KQ9NSY1 1161 aaPredicted RBP9.7□□□□□ -0.86
LSM5-208ENST00000450169 GGA2Q9UJY4 613 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 FAM184BQ9ULE4 1060 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 ZNF330Q9Y3S2 320 aaPredicted RBP9.7□□□□□ -0.86
LSM5-208ENST00000450169 NFE2L3Q9Y4A8 694 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.7□□□□□ -0.86
LSM5-208ENST00000450169 CEMIPQ8WUJ3 1361 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 CAND2O75155 1236 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 TAF5LO75529 589 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 POLR3DP05423 398 aaPredicted RBP9.7□□□□□ -0.86
LSM5-208ENST00000450169 EPB41P11171 864 aaKnown RBP9.7□□□□□ -0.86
LSM5-208ENST00000450169 CDC27P30260 824 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 PTGER2P43116 358 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 CCT2P78371 535 aaKnown RBP9.7□□□□□ -0.86
LSM5-208ENST00000450169 RBL2Q08999 1139 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 IFT88Q13099 833 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 NBPF14Q5TI25 921 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 TTLL7Q6ZT98 887 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 TRAPPC11Q7Z392 1133 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 AENQ8WTP8 325 aaKnown RBP9.7□□□□□ -0.86
LSM5-208ENST00000450169 ZNF473Q8WTR7 871 aaKnown RBP9.7□□□□□ -0.86
LSM5-208ENST00000450169 LMBR1Q8WVP7 490 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 RPGRIP1Q96KN7 1286 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 MMS19Q96T76 1030 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 TPX2Q9ULW0 747 aaKnown RBP9.7□□□□□ -0.86
LSM5-208ENST00000450169 UBR1Q8IWV7 1749 aa9.69□□□□□ -0.86
LSM5-208ENST00000450169 PECAM1P16284 738 aaPredicted RBP9.69□□□□□ -0.86
LSM5-208ENST00000450169 LSP1P33241 339 aa9.69□□□□□ -0.86
LSM5-208ENST00000450169 RPS6KA3P51812 740 aa9.69□□□□□ -0.86
LSM5-208ENST00000450169 NR1I3Q14994 352 aa9.69□□□□□ -0.86
LSM5-208ENST00000450169 AACSQ86V21 672 aa9.69□□□□□ -0.86
LSM5-208ENST00000450169 NME9Q86XW9 330 aa9.69□□□□□ -0.86
LSM5-208ENST00000450169 NUTM2AQ8IVF1 878 aaPredicted RBP9.69□□□□□ -0.86
LSM5-208ENST00000450169 CPLX3Q8WVH0 158 aa9.69□□□□□ -0.86
LSM5-208ENST00000450169 ZBTB10Q96DT7 871 aa9.69□□□□□ -0.86
LSM5-208ENST00000450169 HOOK2Q96ED9 719 aa9.69□□□□□ -0.86
LSM5-208ENST00000450169 ESF1Q9H501 851 aaKnown RBP9.69□□□□□ -0.86
LSM5-208ENST00000450169 NCOA5Q9HCD5 579 aaKnown RBP9.69□□□□□ -0.86
LSM5-208ENST00000450169 MFAP3LO75121 409 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 NBPF7P0C2Y1 421 aaPredicted RBP9.68□□□□□ -0.86
LSM5-208ENST00000450169 IFFO1Q0D2I5 559 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 TTMPQ5BVD1 217 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 MYSM1Q5VVJ2 828 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 SYNE3Q6ZMZ3 975 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 SND1Q7KZF4 910 aaKnown RBP eCLIP9.68□□□□□ -0.86
LSM5-208ENST00000450169 RUFY1Q96T51 708 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 HOMER3Q9NSC5 361 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 A0A1B0GTH6 734 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 BMP6P22004 513 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 ATP1A2P50993 1020 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 CKAP4Q07065 602 aaKnown RBP9.68□□□□□ -0.86
LSM5-208ENST00000450169 KCNB1Q14721 858 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 TMCO4Q5TGY1 634 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 ANO1Q5XXA6 986 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 TMEM92Q6UXU6 159 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 CCDC121Q6ZUS5 278 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 BRAPQ7Z569 592 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 METTL16Q86W50 562 aaKnown RBP9.68□□□□□ -0.86
LSM5-208ENST00000450169 ARL8AQ96BM9 186 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 HPSEQ9Y251 543 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 PCDHA5Q9Y5H7 936 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 TNRQ92752 1358 aa9.68□□□□□ -0.86
LSM5-208ENST00000450169 ANKRD18BA2A2Z9 1011 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 ENO4A6NNW6 628 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 EVI5O60447 810 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 ATP5JP18859 108 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 RBM5P52756 815 aaKnown RBP eCLIP9.67□□□□□ -0.86
LSM5-208ENST00000450169 FMR1Q06787 632 aaKnown RBP eCLIP9.67□□□□□ -0.86
LSM5-208ENST00000450169 EIF4A2Q14240 407 aaKnown RBP9.67□□□□□ -0.86
LSM5-208ENST00000450169 PDCD2Q16342 344 aaPredicted RBP9.67□□□□□ -0.86
LSM5-208ENST00000450169 CNGA4Q8IV77 575 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 OR8K1Q8NGG5 319 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 ENOX1Q8TC92 643 aaKnown RBP9.67□□□□□ -0.86
LSM5-208ENST00000450169 RRP36Q96EU6 259 aaKnown RBP9.67□□□□□ -0.86
LSM5-208ENST00000450169 HAUS2Q9NVX0 235 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 SAR1BQ9Y6B6 198 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 NRKQ7Z2Y5 1582 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 EDC4Q6P2E9 1401 aaKnown RBP9.67□□□□□ -0.86
LSM5-208ENST00000450169 PSMD14O00487 310 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 ENC1O14682 589 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 CYP21A2P08686 494 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 HMGB1P09429 215 aaKnown RBP9.67□□□□□ -0.86
LSM5-208ENST00000450169 MARCKSP29966 332 aaPredicted RBP9.67□□□□□ -0.86
LSM5-208ENST00000450169 PRPHP41219 470 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 HDGFP51858 240 aaKnown RBP9.67□□□□□ -0.86
LSM5-208ENST00000450169 HDLBPQ00341 1268 aaKnown RBP9.67□□□□□ -0.86
LSM5-208ENST00000450169 PTGISQ16647 500 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms