RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 FGAP02671 866 aa15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 PCP11498 1178 aaKnown RBP15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 CHMLP26374 656 aa15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 NT5C2P49902 561 aa15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 EVX2Q03828 476 aa15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 CRHR2Q13324 411 aa15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 VPS53Q5VIR6 699 aa15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 GPAT2Q6NUI2 795 aa15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 USP17L2Q6R6M4 530 aa15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 GADL1Q6ZQY3 521 aa15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 PARK7Q99497 189 aaKnown RBP15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 DSCC1Q9BVC3 393 aa15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 KIAA1683Q9H0B3 1180 aa15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 SH2D4AQ9H788 454 aa15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 CTNNA3Q9UI47 895 aa15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 TSKSQ9UJT2 592 aa15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 PNMA3Q9UL41 463 aa15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 BAZ2AQ9UIF9 1905 aaKnown RBP15.54■□□□□ 0.08
SNRNP27-203ENST00000450162 TLR2O60603 784 aa15.53■□□□□ 0.08
SNRNP27-203ENST00000450162 FKTNO75072 461 aa15.53■□□□□ 0.08
SNRNP27-203ENST00000450162 GUCY1A2P33402 732 aa15.53■□□□□ 0.08
SNRNP27-203ENST00000450162 HMGCS2P54868 508 aa15.53■□□□□ 0.08
SNRNP27-203ENST00000450162 MTMR2Q13614 643 aa15.53■□□□□ 0.08
SNRNP27-203ENST00000450162 SEPT2Q15019 361 aa15.53■□□□□ 0.08
SNRNP27-203ENST00000450162 PPP4R3BQ5MIZ7 849 aa15.53■□□□□ 0.08
SNRNP27-203ENST00000450162 CCDC84Q86UT8 332 aaPredicted RBP15.53■□□□□ 0.08
SNRNP27-203ENST00000450162 C12orf42Q96LP6 360 aa15.53■□□□□ 0.08
SNRNP27-203ENST00000450162 FGRP09769 529 aa15.52■□□□□ 0.08
SNRNP27-203ENST00000450162 AKR1B1P15121 316 aa15.52■□□□□ 0.08
SNRNP27-203ENST00000450162 RASA1P20936 1047 aa15.52■□□□□ 0.08
SNRNP27-203ENST00000450162 HOXA7P31268 230 aaPredicted RBP15.52■□□□□ 0.08
SNRNP27-203ENST00000450162 ARHGEF6Q15052 776 aa15.52■□□□□ 0.08
SNRNP27-203ENST00000450162 FEZ1Q99689 392 aa15.52■□□□□ 0.08
SNRNP27-203ENST00000450162 ARHGEF10LQ9HCE6 1279 aa15.52■□□□□ 0.08
SNRNP27-203ENST00000450162 SMIM22K7EJ46 135 aa15.51■□□□□ 0.07
SNRNP27-203ENST00000450162 OSBPP22059 807 aa15.51■□□□□ 0.07
SNRNP27-203ENST00000450162 ICA1Q05084 483 aa15.51■□□□□ 0.07
SNRNP27-203ENST00000450162 SHROOM1Q2M3G4 852 aaPredicted RBP15.51■□□□□ 0.07
SNRNP27-203ENST00000450162 ZNF296Q8WUU4 475 aaPredicted RBP15.51■□□□□ 0.07
SNRNP27-203ENST00000450162 RNF41Q9H4P4 317 aaPredicted RBP15.51■□□□□ 0.07
SNRNP27-203ENST00000450162 SYNPO2Q9UMS6 1093 aa15.51■□□□□ 0.07
SNRNP27-203ENST00000450162 PHIPQ8WWQ0 1821 aa15.51■□□□□ 0.07
SNRNP27-203ENST00000450162 ATAD5Q96QE3 1844 aa15.51■□□□□ 0.07
SNRNP27-203ENST00000450162 ZNF213O14771 459 aa15.5■□□□□ 0.07
SNRNP27-203ENST00000450162 SGSM2O43147 1006 aa15.5■□□□□ 0.07
SNRNP27-203ENST00000450162 ORC4O43929 436 aa15.5■□□□□ 0.07
SNRNP27-203ENST00000450162 SP3Q02447 781 aa15.5■□□□□ 0.07
SNRNP27-203ENST00000450162 CASC1Q6TDU7 716 aa15.5■□□□□ 0.07
SNRNP27-203ENST00000450162 NEDD1Q8NHV4 660 aa15.5■□□□□ 0.07
SNRNP27-203ENST00000450162 LPAR1Q92633 364 aa15.5■□□□□ 0.07
SNRNP27-203ENST00000450162 ERO1AQ96HE7 468 aa15.5■□□□□ 0.07
SNRNP27-203ENST00000450162 R3HDMLQ9H3Y0 253 aa15.5■□□□□ 0.07
SNRNP27-203ENST00000450162 EMILIN3Q9NT22 766 aa15.5■□□□□ 0.07
SNRNP27-203ENST00000450162 NYAP2Q9P242 653 aa15.5■□□□□ 0.07
SNRNP27-203ENST00000450162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.5■□□□□ 0.07
SNRNP27-203ENST00000450162 TMX2Q9Y320 296 aa15.5■□□□□ 0.07
SNRNP27-203ENST00000450162 TSPY3P0CV98 308 aa15.49■□□□□ 0.07
SNRNP27-203ENST00000450162 TSPY8P0CW00 308 aa15.49■□□□□ 0.07
SNRNP27-203ENST00000450162 GCLCP48506 637 aaPredicted RBP15.49■□□□□ 0.07
SNRNP27-203ENST00000450162 IMMTQ16891 758 aaKnown RBP15.49■□□□□ 0.07
SNRNP27-203ENST00000450162 C17orf99Q6UX52 265 aa15.49■□□□□ 0.07
SNRNP27-203ENST00000450162 ACER1Q8TDN7 264 aa15.49■□□□□ 0.07
SNRNP27-203ENST00000450162 SMCR8Q8TEV9 937 aaPredicted RBP15.49■□□□□ 0.07
SNRNP27-203ENST00000450162 GTF3C2Q8WUA4 911 aaPredicted RBP15.49■□□□□ 0.07
SNRNP27-203ENST00000450162 USP17L15C9J2P7 530 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 USP17L13C9JLJ4 530 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 USP17L11C9JVI0 530 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 USP17L18D6R9N7 530 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 USP17L22D6RA61 530 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 USP17L17D6RBQ6 530 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 USP17L19D6RCP7 530 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 USP17L20D6RJB6 530 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 PRDM1O75626 825 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 IRX3P78415 501 aaPredicted RBP15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 CTDSPL2Q05D32 466 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 USP17L24Q0WX57 530 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 KIF22Q14807 665 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 PKN2Q16513 984 aaKnown RBP15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 AKNAD1Q5T1N1 836 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 TREML2Q5T2D2 321 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 COL13A1Q5TAT6 717 aaPredicted RBP15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 MFSD6Q6ZSS7 791 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 KIAA1211Q6ZU35 1233 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 SIAH1Q8IUQ4 282 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 STK11IPQ8N1F8 1099 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 STAG1Q8WVM7 1258 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 PLIN4Q96Q06 1357 aa15.48■□□□□ 0.07
SNRNP27-203ENST00000450162 ADGRA2Q96PE1 1338 aa15.47■□□□□ 0.07
SNRNP27-203ENST00000450162 IGKV6D-41A0A0C4DH26 115 aa15.47■□□□□ 0.07
SNRNP27-203ENST00000450162 A0A1W2PRG0 241 aa15.47■□□□□ 0.07
SNRNP27-203ENST00000450162 TSPY2A6NKD2 308 aa15.47■□□□□ 0.07
SNRNP27-203ENST00000450162 GNRH1P01148 92 aa15.47■□□□□ 0.07
SNRNP27-203ENST00000450162 CYP2C8P10632 490 aa15.47■□□□□ 0.07
SNRNP27-203ENST00000450162 EEF2P13639 858 aaKnown RBP15.47■□□□□ 0.07
SNRNP27-203ENST00000450162 TFAP4Q01664 338 aa15.47■□□□□ 0.07
SNRNP27-203ENST00000450162 CTU1Q7Z7A3 348 aaKnown RBP15.47■□□□□ 0.07
SNRNP27-203ENST00000450162 MKL1Q969V6 931 aa15.47■□□□□ 0.07
SNRNP27-203ENST00000450162 ASCC2Q9H1I8 757 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms