RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 PPP1R7Q15435 360 aa11.75□□□□□ -0.53
PRDM15-208ENST00000449395 ANO1Q5XXA6 986 aa11.75□□□□□ -0.53
PRDM15-208ENST00000449395 TRPC6Q9Y210 931 aa11.75□□□□□ -0.53
PRDM15-208ENST00000449395 CTTNBP2Q8WZ74 1663 aa11.75□□□□□ -0.53
PRDM15-208ENST00000449395 ZBTB16Q05516 673 aa11.75□□□□□ -0.53
PRDM15-208ENST00000449395 ZBTB9Q96C00 473 aa11.75□□□□□ -0.53
PRDM15-208ENST00000449395 MTRF1LQ9UGC7 380 aaKnown RBP11.75□□□□□ -0.53
PRDM15-208ENST00000449395 EPB41P11171 864 aaKnown RBP11.75□□□□□ -0.53
PRDM15-208ENST00000449395 USH1GQ495M9 461 aa11.75□□□□□ -0.53
PRDM15-208ENST00000449395 XAGE2Q96GT9 111 aa11.75□□□□□ -0.53
PRDM15-208ENST00000449395 TRIM17Q9Y577 477 aa11.75□□□□□ -0.53
PRDM15-208ENST00000449395 CCDC25Q86WR0 208 aa11.75□□□□□ -0.53
PRDM15-208ENST00000449395 FMNL3Q8IVF7 1028 aa11.75□□□□□ -0.53
PRDM15-208ENST00000449395 DBNDD2Q9BQY9 259 aa11.75□□□□□ -0.53
PRDM15-208ENST00000449395 BABAM1Q9NWV8 329 aa11.75□□□□□ -0.53
PRDM15-208ENST00000449395 HACE1Q8IYU2 909 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 PIK3AP1Q6ZUJ8 805 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 MTUS1Q9ULD2 1270 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 CCNT1O60563 726 aaKnown RBP11.74□□□□□ -0.53
PRDM15-208ENST00000449395 USP17L8P0C7I0 530 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 SLC17A8Q8NDX2 589 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 APPBP2Q92624 585 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 AATFQ9NY61 560 aaKnown RBP eCLIP11.74□□□□□ -0.53
PRDM15-208ENST00000449395 KCNH3Q9ULD8 1083 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 AOX1Q06278 1338 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 DDX39AO00148 427 aaKnown RBP11.74□□□□□ -0.53
PRDM15-208ENST00000449395 CCDC121Q6ZUS5 278 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 RSPH3Q86UC2 560 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 KLHDC4Q8TBB5 520 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 CCDC114Q96M63 670 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 VPS16Q9H269 839 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 TLDC2A0PJX2 215 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 TBC1D8BQ0IIM8 1120 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 CC2D2BQ6DHV5 1058 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 IGSF22Q8N9C0 903 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 FAM227BQ96M60 508 aa11.74□□□□□ -0.53
PRDM15-208ENST00000449395 USP17L3A6NCW0 530 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 USP17L4A6NCW7 530 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 TRPA1O75762 1119 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 TUBBP07437 444 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 IL13P35225 146 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 DNAJC21Q5F1R6 531 aaKnown RBP11.73□□□□□ -0.53
PRDM15-208ENST00000449395 CNNM4Q6P4Q7 775 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 USP17L1Q7RTZ2 530 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.73□□□□□ -0.53
PRDM15-208ENST00000449395 NCOA5Q9HCD5 579 aaKnown RBP11.73□□□□□ -0.53
PRDM15-208ENST00000449395 TLR3O15455 904 aaKnown RBP11.73□□□□□ -0.53
PRDM15-208ENST00000449395 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.73□□□□□ -0.53
PRDM15-208ENST00000449395 GPAA1O43292 621 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 SEL1L2Q5TEA6 688 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 MAPKAPK5Q8IW41 473 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 ELP3Q9H9T3 547 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 KRT5P13647 590 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 ATP2A2P16615 1042 aaKnown RBP11.73□□□□□ -0.53
PRDM15-208ENST00000449395 DEFB115Q30KQ5 88 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 SPATA24Q86W54 205 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 ZNF594Q96JF6 807 aaPredicted RBP11.73□□□□□ -0.53
PRDM15-208ENST00000449395 RBSNQ9H1K0 784 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 V9GY48 417 aaPredicted RBP11.73□□□□□ -0.53
PRDM15-208ENST00000449395 TCOF1Q13428 1488 aaKnown RBP11.73□□□□□ -0.53
PRDM15-208ENST00000449395 TRIM14Q14142 442 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 CPLX4Q7Z7G2 160 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 TBC1D22AQ8WUA7 517 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 KCNK9Q9NPC2 374 aa11.73□□□□□ -0.53
PRDM15-208ENST00000449395 POLR2DO15514 142 aaKnown RBP11.72□□□□□ -0.53
PRDM15-208ENST00000449395 ALAS1P13196 640 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 SMC6Q96SB8 1091 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 TXNDC16Q9P2K2 825 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 EBAG9O00559 213 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 PER1O15534 1290 aaPredicted RBP11.72□□□□□ -0.53
PRDM15-208ENST00000449395 PPP2R3AQ06190 1150 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 CALCOCO2Q13137 446 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 HDXQ7Z353 690 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 TGFBRAP1Q8WUH2 860 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 MAK16Q9BXY0 300 aaKnown RBP11.72□□□□□ -0.53
PRDM15-208ENST00000449395 RIMS1Q86UR5 1692 aaKnown RBP11.72□□□□□ -0.53
PRDM15-208ENST00000449395 ARHGEF12Q9NZN5 1544 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 C1orf228Q6PIY5 440 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 UBLCP1Q8WVY7 318 aaPredicted RBP11.72□□□□□ -0.53
PRDM15-208ENST00000449395 SBNO1A3KN83 1393 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 WDR17Q8IZU2 1322 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 HOXB7P09629 217 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 EPHX2P34913 555 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 ARFGAP2Q8N6H7 521 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 CCDC26Q8TAB7 109 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 FNBP1Q96RU3 617 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 CLSTN2Q9H4D0 955 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 SGSM2O43147 1006 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 VWA3BQ502W6 1294 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 WDR44Q5JSH3 913 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 CFAP58Q5T655 872 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 FAM117BQ6P1L5 589 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 RAB3IL1Q8TBN0 382 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 JAKMIP2Q96AA8 810 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 SLITRK6Q9H5Y7 841 aa11.72□□□□□ -0.53
PRDM15-208ENST00000449395 CUTAO60888 179 aa11.71□□□□□ -0.53
PRDM15-208ENST00000449395 KIFAP3Q92845 792 aa11.71□□□□□ -0.53
PRDM15-208ENST00000449395 CSRNP1Q96S65 589 aa11.71□□□□□ -0.53
PRDM15-208ENST00000449395 MAPK8IP1Q9UQF2 711 aa11.71□□□□□ -0.53
PRDM15-208ENST00000449395 COL17A1Q9UMD9 1497 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms