RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 STAP2Q9UGK3 403 aa17.5■□□□□ 0.39
USP39-206ENST00000448971 SLC4A4Q9Y6R1 1079 aa17.5■□□□□ 0.39
USP39-206ENST00000448971 PRKAB2O43741 272 aa17.49■□□□□ 0.39
USP39-206ENST00000448971 FARP2O94887 1054 aaPredicted RBP17.49■□□□□ 0.39
USP39-206ENST00000448971 ELNP15502 786 aa17.49■□□□□ 0.39
USP39-206ENST00000448971 IRF5Q13568 498 aa17.49■□□□□ 0.39
USP39-206ENST00000448971 FOXP4Q8IVH2 680 aaPredicted RBP17.49■□□□□ 0.39
USP39-206ENST00000448971 AMOTL1Q8IY63 956 aa17.49■□□□□ 0.39
USP39-206ENST00000448971 DCP1AQ9NPI6 582 aaPredicted RBP17.49■□□□□ 0.39
USP39-206ENST00000448971 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.49■□□□□ 0.39
USP39-206ENST00000448971 SERPINB13Q9UIV8 391 aa17.49■□□□□ 0.39
USP39-206ENST00000448971 NR2E3Q9Y5X4 410 aa17.49■□□□□ 0.39
USP39-206ENST00000448971 ATAD5Q96QE3 1844 aa17.49■□□□□ 0.39
USP39-206ENST00000448971 GDF11O95390 407 aa17.48■□□□□ 0.39
USP39-206ENST00000448971 INHAP05111 366 aa17.48■□□□□ 0.39
USP39-206ENST00000448971 CAP2P40123 477 aa17.48■□□□□ 0.39
USP39-206ENST00000448971 CCDC84Q86UT8 332 aaPredicted RBP17.48■□□□□ 0.39
USP39-206ENST00000448971 EVI5LQ96CN4 794 aa17.48■□□□□ 0.39
USP39-206ENST00000448971 EHD4Q9H223 541 aa17.48■□□□□ 0.39
USP39-206ENST00000448971 ATP8A2Q9NTI2 1148 aa17.48■□□□□ 0.39
USP39-206ENST00000448971 TRIM75PA6NK02 468 aa17.47■□□□□ 0.39
USP39-206ENST00000448971 TRIM6-TRIM34B2RNG4 842 aa17.47■□□□□ 0.39
USP39-206ENST00000448971 TNPO2O14787 897 aaKnown RBP17.47■□□□□ 0.39
USP39-206ENST00000448971 GPAA1O43292 621 aa17.47■□□□□ 0.39
USP39-206ENST00000448971 CAPN2P17655 700 aa17.47■□□□□ 0.39
USP39-206ENST00000448971 OSBP2Q969R2 916 aa17.47■□□□□ 0.39
USP39-206ENST00000448971 CRISPLD2Q9H0B8 497 aa17.47■□□□□ 0.39
USP39-206ENST00000448971 PAK6Q9NQU5 681 aaPredicted RBP17.47■□□□□ 0.39
USP39-206ENST00000448971 AGTPBP1Q9UPW5 1226 aa17.47■□□□□ 0.39
USP39-206ENST00000448971 M0R2C6 588 aa17.46■□□□□ 0.39
USP39-206ENST00000448971 TFRCP02786 760 aaKnown RBP17.46■□□□□ 0.39
USP39-206ENST00000448971 TREML2Q5T2D2 321 aa17.46■□□□□ 0.39
USP39-206ENST00000448971 METTL16Q86W50 562 aaKnown RBP17.46■□□□□ 0.39
USP39-206ENST00000448971 PLEKHM2Q8IWE5 1019 aa17.46■□□□□ 0.39
USP39-206ENST00000448971 SMCR8Q8TEV9 937 aaPredicted RBP17.46■□□□□ 0.39
USP39-206ENST00000448971 DEFB118Q96PH6 123 aa17.46■□□□□ 0.39
USP39-206ENST00000448971 NEFLP07196 543 aa17.45■□□□□ 0.38
USP39-206ENST00000448971 ASNSP08243 561 aa17.45■□□□□ 0.38
USP39-206ENST00000448971 CYP2D6P10635 497 aa17.45■□□□□ 0.38
USP39-206ENST00000448971 PLCD1P51178 756 aa17.45■□□□□ 0.38
USP39-206ENST00000448971 RRP1BQ14684 758 aaKnown RBP17.45■□□□□ 0.38
USP39-206ENST00000448971 ANKRD13CQ8N6S4 541 aa17.45■□□□□ 0.38
USP39-206ENST00000448971 RILPL2Q969X0 211 aa17.45■□□□□ 0.38
USP39-206ENST00000448971 AS3MTQ9HBK9 375 aa17.45■□□□□ 0.38
USP39-206ENST00000448971 ARPP21Q9UBL0 812 aaPredicted RBP17.45■□□□□ 0.38
USP39-206ENST00000448971 ZBTB21Q9ULJ3 1066 aa17.45■□□□□ 0.38
USP39-206ENST00000448971 GNAT2P19087 354 aa17.44■□□□□ 0.38
USP39-206ENST00000448971 FAM110CQ1W6H9 321 aa17.44■□□□□ 0.38
USP39-206ENST00000448971 STRBPQ96SI9 672 aaKnown RBP17.44■□□□□ 0.38
USP39-206ENST00000448971 SEC62Q99442 399 aaKnown RBP17.44■□□□□ 0.38
USP39-206ENST00000448971 TBC1D2Q9BYX2 928 aa17.44■□□□□ 0.38
USP39-206ENST00000448971 A0A1W2PPC1 479 aa17.43■□□□□ 0.38
USP39-206ENST00000448971 USP17L5A8MUK1 530 aa17.43■□□□□ 0.38
USP39-206ENST00000448971 EVI5O60447 810 aa17.43■□□□□ 0.38
USP39-206ENST00000448971 APPP05067 770 aa17.43■□□□□ 0.38
USP39-206ENST00000448971 TDO2P48775 406 aa17.43■□□□□ 0.38
USP39-206ENST00000448971 EVX2Q03828 476 aa17.43■□□□□ 0.38
USP39-206ENST00000448971 SPP2Q13103 211 aa17.43■□□□□ 0.38
USP39-206ENST00000448971 ZMYM1Q5SVZ6 1142 aa17.43■□□□□ 0.38
USP39-206ENST00000448971 PROCA1Q8NCQ7 364 aaPredicted RBP17.43■□□□□ 0.38
USP39-206ENST00000448971 COA7Q96BR5 231 aa17.43■□□□□ 0.38
USP39-206ENST00000448971 PAWRQ96IZ0 340 aaKnown RBP17.43■□□□□ 0.38
USP39-206ENST00000448971 OSBPL3Q9H4L5 887 aa17.43■□□□□ 0.38
USP39-206ENST00000448971 GJD2Q9UKL4 321 aa17.43■□□□□ 0.38
USP39-206ENST00000448971 ALPK3Q96L96 1907 aa17.43■□□□□ 0.38
USP39-206ENST00000448971 BAZ2AQ9UIF9 1905 aaKnown RBP17.43■□□□□ 0.38
USP39-206ENST00000448971 CYP2D7A0A087X1C5 515 aa17.42■□□□□ 0.38
USP39-206ENST00000448971 USP17L12C9JPN9 530 aa17.42■□□□□ 0.38
USP39-206ENST00000448971 USP17L21D6R901 530 aa17.42■□□□□ 0.38
USP39-206ENST00000448971 GH2P01242 217 aa17.42■□□□□ 0.38
USP39-206ENST00000448971 CENPBP07199 599 aaPredicted RBP17.42■□□□□ 0.38
USP39-206ENST00000448971 SHROOM1Q2M3G4 852 aaPredicted RBP17.42■□□□□ 0.38
USP39-206ENST00000448971 CERKLQ49MI3 558 aaPredicted RBP17.42■□□□□ 0.38
USP39-206ENST00000448971 TATDN1Q6P1N9 297 aa17.42■□□□□ 0.38
USP39-206ENST00000448971 ZNF280CQ8ND82 737 aa17.42■□□□□ 0.38
USP39-206ENST00000448971 GINM1Q9NU53 330 aa17.42■□□□□ 0.38
USP39-206ENST00000448971 SWAP70Q9UH65 585 aa17.42■□□□□ 0.38
USP39-206ENST00000448971 MPHOSPH10O00566 681 aaKnown RBP17.41■□□□□ 0.38
USP39-206ENST00000448971 SOX1O00570 391 aaPredicted RBP17.41■□□□□ 0.38
USP39-206ENST00000448971 PDE4AP27815 886 aa17.41■□□□□ 0.38
USP39-206ENST00000448971 SHMT1P34896 483 aa17.41■□□□□ 0.38
USP39-206ENST00000448971 GABPAQ06546 454 aa17.41■□□□□ 0.38
USP39-206ENST00000448971 RAB3GAP1Q15042 981 aa17.41■□□□□ 0.38
USP39-206ENST00000448971 ABCB5Q2M3G0 1257 aa17.41■□□□□ 0.38
USP39-206ENST00000448971 CCDC129Q6ZRS4 1044 aa17.41■□□□□ 0.38
USP39-206ENST00000448971 SLC44A5Q8NCS7 719 aa17.41■□□□□ 0.38
USP39-206ENST00000448971 DYNLL2Q96FJ2 89 aa17.41■□□□□ 0.38
USP39-206ENST00000448971 NACAP1Q9BZK3 213 aa17.41■□□□□ 0.38
USP39-206ENST00000448971 EPB41L4AQ9HCS5 686 aaPredicted RBP17.41■□□□□ 0.38
USP39-206ENST00000448971 CABP5Q9NP86 173 aa17.41■□□□□ 0.38
USP39-206ENST00000448971 PNMA3Q9UL41 463 aa17.41■□□□□ 0.38
USP39-206ENST00000448971 GSG1L2A8MUP6 293 aa17.4■□□□□ 0.38
USP39-206ENST00000448971 GCLCP48506 637 aaPredicted RBP17.4■□□□□ 0.38
USP39-206ENST00000448971 HMGCS2P54868 508 aa17.4■□□□□ 0.38
USP39-206ENST00000448971 JAG1P78504 1218 aa17.4■□□□□ 0.38
USP39-206ENST00000448971 MTMR2Q13614 643 aa17.4■□□□□ 0.38
USP39-206ENST00000448971 SH3D19Q5HYK7 790 aa17.4■□□□□ 0.38
USP39-206ENST00000448971 C12orf60Q5U649 245 aa17.4■□□□□ 0.38
USP39-206ENST00000448971 GIMAP6Q6P9H5 292 aa17.4■□□□□ 0.38
USP39-206ENST00000448971 CTR9Q6PD62 1173 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms