RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CCPG1Q9ULG6 757 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 CIAO1O76071 339 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 USH1GQ495M9 461 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 BEND3Q5T5X7 828 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 UPF3BQ9BZI7 483 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 TCP11L1Q9NUJ3 509 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 BCL9O00512 1426 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 KIF1AQ12756 1690 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 MRPS9P82933 396 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 TFAP4Q01664 338 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 SEPT14Q6ZU15 432 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 NUDT18Q6ZVK8 323 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 ZKSCAN4Q969J2 545 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 DEFB118Q96PH6 123 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 AAASQ9NRG9 546 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 ZNF70Q9UC06 446 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 HERC5Q9UII4 1024 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 GNA11P29992 359 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 CBX1P83916 185 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 SYCP3Q8IZU3 236 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 ATP8A2Q9NTI2 1148 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 IBTKQ9P2D0 1353 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 TTC41PQ6P2S7 1318 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 USP17L15C9J2P7 530 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 USP17L13C9JLJ4 530 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 TMEM232C9JQI7 657 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 USP17L11C9JVI0 530 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 USP17L18D6R9N7 530 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 USP17L22D6RA61 530 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 USP17L17D6RBQ6 530 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 USP17L19D6RCP7 530 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 USP17L20D6RJB6 530 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 ZMYND10O75800 440 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 NTSR2O95665 410 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 RGS2P41220 211 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 SSRP1Q08945 709 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 USP17L24Q0WX57 530 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 SPICE1Q8N0Z3 855 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 TMEM199Q8N511 208 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 CDCA5Q96FF9 252 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 PUS3Q9BZE2 481 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 ZNF532Q9HCE3 1301 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 H7C1W4 665 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 GCLCP48506 637 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 NEK4P51957 841 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 ZNF215Q9UL58 517 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 PABPN1LA6NDY0 278 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 C19orf81C9J6K1 198 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 ARPP19P56211 112 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 CEP68Q76N32 757 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 DRC7Q8IY82 874 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 ALG1Q9BT22 464 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 GBP3Q9H0R5 595 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 RTL9Q8NET4 1388 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 TMED8Q6PL24 325 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 SLIT2O94813 1529 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 TESPA1A2RU30 521 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 PHACTR2O75167 634 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 FOSL2P15408 326 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 HMGCS2P54868 508 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 PTPROQ16827 1216 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 ENGASEQ8NFI3 743 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 STARD7Q9NQZ5 370 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 ENTPD7Q9NQZ7 604 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 MRVI1Q9Y6F6 885 aa6.43□□□□□ -1.38
CDC42BPA-209ENST00000448940 ADCY3O60266 1144 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 AOC2O75106 756 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 KRT17Q04695 432 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 STK38Q15208 465 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 FAM151AQ8WW52 585 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 COPRSQ9NQ92 184 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 RTEL1Q9NZ71 1219 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 FOXD4L5Q5VV16 416 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 CCDC73Q6ZRK6 1079 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 CD99L2Q8TCZ2 262 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 FOXD4L4Q8WXT5 416 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 PPP1R12CQ9BZL4 782 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 ZBTB43O43298 467 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 GH2P01242 217 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 POTEJP0CG39 1038 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 MDM2Q00987 491 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 CCDC184Q52MB2 194 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 CES5AQ6NT32 575 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 TMEM179Q6ZVK1 233 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 DEFB128Q7Z7B8 93 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 GPRC5AQ8NFJ5 357 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 SERPINA10Q9UK55 444 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 RTN1Q16799 776 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 CFAP58Q5T655 872 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 STXBP4Q6ZWJ1 553 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 SYAP1Q96A49 352 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 CREBZFQ9NS37 354 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 PDRG1Q9NUG6 133 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 SCAF8Q9UPN6 1271 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 METAP2P50579 478 aaKnown RBP eCLIP6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 FAM160B2Q86V87 743 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 LMCD1Q9NZU5 365 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 ADM5C9JUS6 153 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 GPAA1O43292 621 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms