RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 SHROOM1Q2M3G4 852 aaPredicted RBP17.09■□□□□ 0.33
APP-210ENST00000448850 NFXL1Q6ZNB6 911 aa17.09■□□□□ 0.33
APP-210ENST00000448850 TMX3Q96JJ7 454 aa17.09■□□□□ 0.33
APP-210ENST00000448850 BRPF3Q9ULD4 1205 aa17.09■□□□□ 0.33
APP-210ENST00000448850 KLF18A0A0U1RQI7 1052 aa17.08■□□□□ 0.33
APP-210ENST00000448850 CCDC69A6NI79 296 aa17.08■□□□□ 0.33
APP-210ENST00000448850 GH2P01242 217 aa17.08■□□□□ 0.33
APP-210ENST00000448850 NF2P35240 595 aa17.08■□□□□ 0.33
APP-210ENST00000448850 NOVP48745 357 aa17.08■□□□□ 0.33
APP-210ENST00000448850 JAG1P78504 1218 aa17.08■□□□□ 0.33
APP-210ENST00000448850 ME3Q16798 604 aa17.08■□□□□ 0.33
APP-210ENST00000448850 ZNF274Q96GC6 653 aaPredicted RBP17.08■□□□□ 0.33
APP-210ENST00000448850 MTMR4Q9NYA4 1195 aa17.08■□□□□ 0.33
APP-210ENST00000448850 ZNF112Q9UJU3 913 aa17.08■□□□□ 0.33
APP-210ENST00000448850 STX8Q9UNK0 236 aa17.08■□□□□ 0.33
APP-210ENST00000448850 CTNND1O60716 968 aaKnown RBP17.07■□□□□ 0.32
APP-210ENST00000448850 LARGE1O95461 756 aa17.07■□□□□ 0.32
APP-210ENST00000448850 GUCY1A2P33402 732 aa17.07■□□□□ 0.32
APP-210ENST00000448850 SEPT2Q15019 361 aa17.07■□□□□ 0.32
APP-210ENST00000448850 PPP4R3BQ5MIZ7 849 aa17.07■□□□□ 0.32
APP-210ENST00000448850 KANSL2Q9H9L4 492 aa17.07■□□□□ 0.32
APP-210ENST00000448850 GPBP1L1Q9HC44 474 aaPredicted RBP17.07■□□□□ 0.32
APP-210ENST00000448850 SH2B1Q9NRF2 756 aaPredicted RBP17.07■□□□□ 0.32
APP-210ENST00000448850 ZBTB21Q9ULJ3 1066 aa17.07■□□□□ 0.32
APP-210ENST00000448850 USP2O75604 605 aaPredicted RBP17.07■□□□□ 0.32
APP-210ENST00000448850 APOA5Q6Q788 366 aa17.07■□□□□ 0.32
APP-210ENST00000448850 CLEC10AQ8IUN9 316 aa17.07■□□□□ 0.32
APP-210ENST00000448850 KLRG1Q96E93 195 aa17.07■□□□□ 0.32
APP-210ENST00000448850 IPO9Q96P70 1041 aaKnown RBP17.07■□□□□ 0.32
APP-210ENST00000448850 NAP1L2Q9ULW6 460 aaPredicted RBP17.07■□□□□ 0.32
APP-210ENST00000448850 FZD1Q9UP38 647 aa17.07■□□□□ 0.32
APP-210ENST00000448850 SLC12A7Q9Y666 1083 aa17.07■□□□□ 0.32
APP-210ENST00000448850 PPP1R12BO60237 982 aaPredicted RBP17.06■□□□□ 0.32
APP-210ENST00000448850 TTLL1O95922 423 aa17.06■□□□□ 0.32
APP-210ENST00000448850 ASNSP08243 561 aa17.06■□□□□ 0.32
APP-210ENST00000448850 PDIA3P30101 505 aaKnown RBP17.06■□□□□ 0.32
APP-210ENST00000448850 RAB3GAP1Q15042 981 aa17.06■□□□□ 0.32
APP-210ENST00000448850 SYNE3Q6ZMZ3 975 aa17.06■□□□□ 0.32
APP-210ENST00000448850 WRNIP1Q96S55 665 aa17.06■□□□□ 0.32
APP-210ENST00000448850 TMEM47Q9BQJ4 181 aa17.06■□□□□ 0.32
APP-210ENST00000448850 KAT14Q9H8E8 782 aa17.06■□□□□ 0.32
APP-210ENST00000448850 GINM1Q9NU53 330 aa17.06■□□□□ 0.32
APP-210ENST00000448850 TOP1P11387 765 aaKnown RBP17.05■□□□□ 0.32
APP-210ENST00000448850 INPP5BP32019 993 aa17.05■□□□□ 0.32
APP-210ENST00000448850 STK3Q13188 491 aa17.05■□□□□ 0.32
APP-210ENST00000448850 PRKG1Q13976 671 aa17.05■□□□□ 0.32
APP-210ENST00000448850 ZNF654Q8IZM8 581 aa17.05■□□□□ 0.32
APP-210ENST00000448850 NYAP2Q9P242 653 aa17.05■□□□□ 0.32
APP-210ENST00000448850 BAZ2BQ9UIF8 2168 aaKnown RBP17.05■□□□□ 0.32
APP-210ENST00000448850 GOLGA8BA8MQT2 603 aa17.05■□□□□ 0.32
APP-210ENST00000448850 TRAF5O00463 557 aa17.05■□□□□ 0.32
APP-210ENST00000448850 ZBTB43O43298 467 aa17.05■□□□□ 0.32
APP-210ENST00000448850 PFKFB2O60825 505 aa17.05■□□□□ 0.32
APP-210ENST00000448850 ICA1Q05084 483 aa17.05■□□□□ 0.32
APP-210ENST00000448850 CHADLQ6NUI6 762 aa17.05■□□□□ 0.32
APP-210ENST00000448850 CATIPQ7Z7H3 387 aa17.05■□□□□ 0.32
APP-210ENST00000448850 PNMA1Q8ND90 353 aa17.05■□□□□ 0.32
APP-210ENST00000448850 SLKQ9H2G2 1235 aaPredicted RBP17.05■□□□□ 0.32
APP-210ENST00000448850 CLIP2Q9UDT6 1046 aa17.05■□□□□ 0.32
APP-210ENST00000448850 HPS5Q9UPZ3 1129 aa17.05■□□□□ 0.32
APP-210ENST00000448850 EEF2P13639 858 aaKnown RBP17.04■□□□□ 0.32
APP-210ENST00000448850 SLC4A3P48751 1232 aa17.04■□□□□ 0.32
APP-210ENST00000448850 ATP2B2Q01814 1243 aa17.04■□□□□ 0.32
APP-210ENST00000448850 RAB11FIP4Q86YS3 637 aa17.04■□□□□ 0.32
APP-210ENST00000448850 NECAB1Q8N987 351 aa17.04■□□□□ 0.32
APP-210ENST00000448850 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.04■□□□□ 0.32
APP-210ENST00000448850 MKL1Q969V6 931 aa17.04■□□□□ 0.32
APP-210ENST00000448850 MYL10Q9BUA6 226 aa17.04■□□□□ 0.32
APP-210ENST00000448850 PTPRFP10586 1907 aa17.04■□□□□ 0.32
APP-210ENST00000448850 IREB2P48200 963 aaKnown RBP17.03■□□□□ 0.32
APP-210ENST00000448850 RCAN1P53805 252 aa17.03■□□□□ 0.32
APP-210ENST00000448850 CCT2P78371 535 aaKnown RBP17.03■□□□□ 0.32
APP-210ENST00000448850 TROAPQ12815 778 aa17.03■□□□□ 0.32
APP-210ENST00000448850 CUL4AQ13619 759 aa17.03■□□□□ 0.32
APP-210ENST00000448850 MICU3Q86XE3 530 aa17.03■□□□□ 0.32
APP-210ENST00000448850 SIAH1Q8IUQ4 282 aa17.03■□□□□ 0.32
APP-210ENST00000448850 SCYL3Q8IZE3 742 aa17.03■□□□□ 0.32
APP-210ENST00000448850 GTF3C6Q969F1 213 aa17.03■□□□□ 0.32
APP-210ENST00000448850 ZKSCAN4Q969J2 545 aaPredicted RBP17.03■□□□□ 0.32
APP-210ENST00000448850 DDAH1O94760 285 aa17.03■□□□□ 0.32
APP-210ENST00000448850 CALM1P0DP23 149 aa17.03■□□□□ 0.32
APP-210ENST00000448850 CALM2P0DP24 149 aa17.03■□□□□ 0.32
APP-210ENST00000448850 CALM3P0DP25 149 aa17.03■□□□□ 0.32
APP-210ENST00000448850 RXRAP19793 462 aa17.03■□□□□ 0.32
APP-210ENST00000448850 METAP2P50579 478 aaKnown RBP eCLIP17.03■□□□□ 0.32
APP-210ENST00000448850 MAP3K9P80192 1104 aa17.03■□□□□ 0.32
APP-210ENST00000448850 FMR1Q06787 632 aaKnown RBP eCLIP17.03■□□□□ 0.32
APP-210ENST00000448850 SCRN1Q12765 414 aa17.03■□□□□ 0.32
APP-210ENST00000448850 NOL9Q5SY16 702 aaKnown RBP17.03■□□□□ 0.32
APP-210ENST00000448850 CCDC83Q8IWF9 413 aa17.03■□□□□ 0.32
APP-210ENST00000448850 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.03■□□□□ 0.32
APP-210ENST00000448850 NID2Q14112 1375 aa17.02■□□□□ 0.32
APP-210ENST00000448850 ST3GAL1Q11201 340 aa17.02■□□□□ 0.31
APP-210ENST00000448850 TTLL12Q14166 644 aaPredicted RBP17.02■□□□□ 0.31
APP-210ENST00000448850 MAP3K11Q16584 847 aa17.02■□□□□ 0.31
APP-210ENST00000448850 NUP133Q8WUM0 1156 aa17.02■□□□□ 0.31
APP-210ENST00000448850 ARHGEF10LQ9HCE6 1279 aa17.02■□□□□ 0.31
APP-210ENST00000448850 PICK1Q9NRD5 415 aa17.02■□□□□ 0.31
APP-210ENST00000448850 GOLGA8AA7E2F4 631 aa17.01■□□□□ 0.31
APP-210ENST00000448850 KIF3CO14782 793 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms