RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 CRB1P82279 1406 aa9.49□□□□□ -0.89
LINC00349-201ENST00000448748 A0A096LPE4 126 aa9.49□□□□□ -0.89
LINC00349-201ENST00000448748 A0A1W2PPZ6 126 aa9.49□□□□□ -0.89
LINC00349-201ENST00000448748 HSPA5P11021 654 aaKnown RBP9.49□□□□□ -0.89
LINC00349-201ENST00000448748 ARL4DP49703 201 aa9.49□□□□□ -0.89
LINC00349-201ENST00000448748 ZC3H6P61129 1189 aaKnown RBP9.49□□□□□ -0.89
LINC00349-201ENST00000448748 C19orf57Q0VDD7 668 aa9.49□□□□□ -0.89
LINC00349-201ENST00000448748 CHRNA2Q15822 529 aa9.49□□□□□ -0.89
LINC00349-201ENST00000448748 SPRED3Q2MJR0 410 aa9.49□□□□□ -0.89
LINC00349-201ENST00000448748 Q6ZS46 218 aa9.49□□□□□ -0.89
LINC00349-201ENST00000448748 NME9Q86XW9 330 aa9.49□□□□□ -0.89
LINC00349-201ENST00000448748 KCNH5Q8NCM2 988 aa9.49□□□□□ -0.89
LINC00349-201ENST00000448748 EHD4Q9H223 541 aa9.49□□□□□ -0.89
LINC00349-201ENST00000448748 DISP2A7MBM2 1401 aa9.48□□□□□ -0.89
LINC00349-201ENST00000448748 H2AFB1P0C5Y9 115 aa9.48□□□□□ -0.89
LINC00349-201ENST00000448748 H2AFB2P0C5Z0 115 aa9.48□□□□□ -0.89
LINC00349-201ENST00000448748 ESRRAP11474 423 aaPredicted RBP9.48□□□□□ -0.89
LINC00349-201ENST00000448748 GLB1P16278 677 aa9.48□□□□□ -0.89
LINC00349-201ENST00000448748 BLMP54132 1417 aaPredicted RBP9.48□□□□□ -0.89
LINC00349-201ENST00000448748 DSC3Q14574 896 aa9.47□□□□□ -0.89
LINC00349-201ENST00000448748 RGPD1P0DJD0 1748 aa9.47□□□□□ -0.89
LINC00349-201ENST00000448748 RTL1A6NKG5 1358 aa9.47□□□□□ -0.89
LINC00349-201ENST00000448748 SBF2Q86WG5 1849 aa9.47□□□□□ -0.89
LINC00349-201ENST00000448748 NSD3Q9BZ95 1437 aa9.47□□□□□ -0.89
LINC00349-201ENST00000448748 FYB1O15117 783 aa9.46□□□□□ -0.9
LINC00349-201ENST00000448748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.46□□□□□ -0.9
LINC00349-201ENST00000448748 EPS8L3Q8TE67 593 aaKnown RBP9.46□□□□□ -0.9
LINC00349-201ENST00000448748 UBL7Q96S82 380 aaPredicted RBP9.46□□□□□ -0.9
LINC00349-201ENST00000448748 WDR17Q8IZU2 1322 aa9.46□□□□□ -0.9
LINC00349-201ENST00000448748 SHANK3Q9BYB0 1731 aa9.45□□□□□ -0.9
LINC00349-201ENST00000448748 RGPD3A6NKT7 1758 aaPredicted RBP9.45□□□□□ -0.9
LINC00349-201ENST00000448748 RGPD2P0DJD1 1756 aa9.45□□□□□ -0.9
LINC00349-201ENST00000448748 RGPD4Q7Z3J3 1758 aa9.45□□□□□ -0.9
LINC00349-201ENST00000448748 TREHO43280 583 aa9.45□□□□□ -0.9
LINC00349-201ENST00000448748 GADD45BO75293 160 aaPredicted RBP9.45□□□□□ -0.9
LINC00349-201ENST00000448748 PCDH1Q08174 1060 aa9.45□□□□□ -0.9
LINC00349-201ENST00000448748 ZNF423Q2M1K9 1284 aa9.45□□□□□ -0.9
LINC00349-201ENST00000448748 CLEC4MQ9H2X3 399 aaPredicted RBP9.45□□□□□ -0.9
LINC00349-201ENST00000448748 SOX17Q9H6I2 414 aaPredicted RBP9.45□□□□□ -0.9
LINC00349-201ENST00000448748 THRAP3Q9Y2W1 955 aaKnown RBP9.45□□□□□ -0.9
LINC00349-201ENST00000448748 KIF24Q5T7B8 1368 aa9.45□□□□□ -0.9
LINC00349-201ENST00000448748 NCAPD2Q15021 1401 aa9.45□□□□□ -0.9
LINC00349-201ENST00000448748 SMG6Q86US8 1419 aaKnown RBP9.45□□□□□ -0.9
LINC00349-201ENST00000448748 MAP2P11137 1827 aaKnown RBP9.45□□□□□ -0.9
LINC00349-201ENST00000448748 PRSS36Q5K4E3 855 aa9.44□□□□□ -0.9
LINC00349-201ENST00000448748 PI16Q6UXB8 463 aa9.44□□□□□ -0.9
LINC00349-201ENST00000448748 BCL9O00512 1426 aa9.44□□□□□ -0.9
LINC00349-201ENST00000448748 KIF7Q2M1P5 1343 aa9.43□□□□□ -0.9
LINC00349-201ENST00000448748 PATL2C9JE40 543 aaKnown RBP9.43□□□□□ -0.9
LINC00349-201ENST00000448748 PDIA4P13667 645 aaKnown RBP9.43□□□□□ -0.9
LINC00349-201ENST00000448748 PLCB3Q01970 1234 aa9.43□□□□□ -0.9
LINC00349-201ENST00000448748 GSTM4Q03013 218 aa9.43□□□□□ -0.9
LINC00349-201ENST00000448748 GRM2Q14416 872 aa9.43□□□□□ -0.9
LINC00349-201ENST00000448748 AEBP1Q8IUX7 1158 aa9.43□□□□□ -0.9
LINC00349-201ENST00000448748 TCP11L2Q8N4U5 519 aa9.43□□□□□ -0.9
LINC00349-201ENST00000448748 RUSC1Q9BVN2 902 aa9.43□□□□□ -0.9
LINC00349-201ENST00000448748 USP26Q9BXU7 913 aa9.43□□□□□ -0.9
LINC00349-201ENST00000448748 CEP41Q9BYV8 373 aa9.43□□□□□ -0.9
LINC00349-201ENST00000448748 ABCB6Q9NP58 842 aa9.43□□□□□ -0.9
LINC00349-201ENST00000448748 RREB1Q92766 1687 aa9.42□□□□□ -0.9
LINC00349-201ENST00000448748 TNS2Q63HR2 1409 aa9.42□□□□□ -0.9
LINC00349-201ENST00000448748 NSD2O96028 1365 aa9.42□□□□□ -0.9
LINC00349-201ENST00000448748 CCDC7Q96M83 1385 aa9.42□□□□□ -0.9
LINC00349-201ENST00000448748 MAP3K19Q56UN5 1328 aa9.42□□□□□ -0.9
LINC00349-201ENST00000448748 PNMA6FA0A0J9YX94 578 aa9.42□□□□□ -0.9
LINC00349-201ENST00000448748 ITPKAP23677 461 aa9.42□□□□□ -0.9
LINC00349-201ENST00000448748 PRPF40BQ6NWY9 871 aaKnown RBP9.42□□□□□ -0.9
LINC00349-201ENST00000448748 PRR23CQ6ZRP0 262 aa9.42□□□□□ -0.9
LINC00349-201ENST00000448748 GLIS3Q8NEA6 775 aa9.42□□□□□ -0.9
LINC00349-201ENST00000448748 RNF208Q9H0X6 261 aa9.42□□□□□ -0.9
LINC00349-201ENST00000448748 ZNF576Q9H609 170 aa9.42□□□□□ -0.9
LINC00349-201ENST00000448748 LOC100289279A0A1B0GTE1 492 aa9.41□□□□□ -0.9
LINC00349-201ENST00000448748 ENOX2Q16206 610 aaKnown RBP9.41□□□□□ -0.9
LINC00349-201ENST00000448748 KRT27Q7Z3Y8 459 aa9.41□□□□□ -0.9
LINC00349-201ENST00000448748 ZSCAN29Q8IWY8 852 aaPredicted RBP9.41□□□□□ -0.9
LINC00349-201ENST00000448748 IP6K1Q92551 441 aa9.41□□□□□ -0.9
LINC00349-201ENST00000448748 COG3Q96JB2 828 aa9.41□□□□□ -0.9
LINC00349-201ENST00000448748 ASB16Q96NS5 453 aa9.41□□□□□ -0.9
LINC00349-201ENST00000448748 PKD1L3Q7Z443 1732 aa9.41□□□□□ -0.9
LINC00349-201ENST00000448748 CGNL1Q0VF96 1302 aa9.4□□□□□ -0.9
LINC00349-201ENST00000448748 NHSQ6T4R5 1651 aa9.4□□□□□ -0.9
LINC00349-201ENST00000448748 DLGAP3O95886 979 aa9.4□□□□□ -0.9
LINC00349-201ENST00000448748 ARMC10Q8N2F6 343 aa9.4□□□□□ -0.9
LINC00349-201ENST00000448748 NRSN2Q9GZP1 204 aa9.4□□□□□ -0.9
LINC00349-201ENST00000448748 NLRP2Q9NX02 1062 aa9.4□□□□□ -0.9
LINC00349-201ENST00000448748 CCDC9Q9Y3X0 531 aaKnown RBP9.4□□□□□ -0.9
LINC00349-201ENST00000448748 INSRP06213 1382 aa9.39□□□□□ -0.91
LINC00349-201ENST00000448748 FLT4P35916 1363 aa9.39□□□□□ -0.91
LINC00349-201ENST00000448748 WASHC2AQ641Q2 1341 aa9.39□□□□□ -0.91
LINC00349-201ENST00000448748 LOC100996750A0A140TA64 210 aa9.39□□□□□ -0.91
LINC00349-201ENST00000448748 TMEM238LA0A1B0GVL6 79 aa9.39□□□□□ -0.91
LINC00349-201ENST00000448748 HOXC9P31274 260 aa9.39□□□□□ -0.91
LINC00349-201ENST00000448748 MAPK8P45983 427 aa9.39□□□□□ -0.91
LINC00349-201ENST00000448748 FMR1Q06787 632 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINC00349-201ENST00000448748 FAM46AQ96IP4 442 aaKnown RBP9.39□□□□□ -0.91
LINC00349-201ENST00000448748 KRTAP4-6Q9BYQ5 205 aa9.39□□□□□ -0.91
LINC00349-201ENST00000448748 OVOS2A0A0G2JMS6 1433 aa9.39□□□□□ -0.91
LINC00349-201ENST00000448748 NPC1L1Q9UHC9 1359 aa9.38□□□□□ -0.91
LINC00349-201ENST00000448748 MEGF11A6BM72 1044 aa9.38□□□□□ -0.91
LINC00349-201ENST00000448748 B3GALT4O96024 378 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms