RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 CTDSPL2Q05D32 466 aa8.08□□□□□ -1.12
RFC4-209ENST00000448497 SF3B2Q13435 895 aaKnown RBP8.08□□□□□ -1.12
RFC4-209ENST00000448497 SEC23AQ15436 765 aa8.08□□□□□ -1.12
RFC4-209ENST00000448497 TMEM67Q5HYA8 995 aa8.08□□□□□ -1.12
RFC4-209ENST00000448497 CPLX2Q6PUV4 134 aaKnown RBP8.08□□□□□ -1.12
RFC4-209ENST00000448497 DPP8Q6V1X1 898 aaPredicted RBP8.08□□□□□ -1.12
RFC4-209ENST00000448497 CHST3Q7LGC8 479 aa8.08□□□□□ -1.12
RFC4-209ENST00000448497 PODNQ7Z5L7 613 aa8.08□□□□□ -1.12
RFC4-209ENST00000448497 C2CD5Q86YS7 1000 aa8.08□□□□□ -1.12
RFC4-209ENST00000448497 FAM184AQ8NB25 1140 aa8.08□□□□□ -1.12
RFC4-209ENST00000448497 ANKK1Q8NFD2 765 aa8.08□□□□□ -1.12
RFC4-209ENST00000448497 SDR42E1Q8WUS8 393 aa8.08□□□□□ -1.12
RFC4-209ENST00000448497 C7orf43Q8WVR3 580 aa8.08□□□□□ -1.12
RFC4-209ENST00000448497 NOL10Q9BSC4 688 aaKnown RBP8.08□□□□□ -1.12
RFC4-209ENST00000448497 ZC3H12CQ9C0D7 883 aaKnown RBP8.08□□□□□ -1.12
RFC4-209ENST00000448497 SCAND2PQ9GZW5 306 aaPredicted RBP8.08□□□□□ -1.12
RFC4-209ENST00000448497 AATFQ9NY61 560 aaKnown RBP eCLIP8.08□□□□□ -1.12
RFC4-209ENST00000448497 BRCA1P38398 1863 aaKnown RBP8.08□□□□□ -1.12
RFC4-209ENST00000448497 CCDC196A0A1B0GTZ2 297 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 ERICH2A1L162 156 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 VPS37CA5D8V6 355 aaPredicted RBP8.07□□□□□ -1.12
RFC4-209ENST00000448497 USP17L12C9JPN9 530 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 USP17L21D6R901 530 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 IFIT3O14879 490 aaKnown RBP8.07□□□□□ -1.12
RFC4-209ENST00000448497 ZBTB43O43298 467 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 IFNAR1P17181 557 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 UBE2HP62256 183 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 KRT85P78386 507 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 HDLBPQ00341 1268 aaKnown RBP8.07□□□□□ -1.12
RFC4-209ENST00000448497 PDE4BQ07343 736 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 RESTQ13127 1097 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 WTAPQ15007 396 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 NTRK3Q16288 839 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 CCDC178Q5BJE1 867 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 MFSD14BQ5SR56 506 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 C12orf60Q5U649 245 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 CDC37L1Q7L3B6 337 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 USP48Q86UV5 1035 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 SLC51AQ86UW1 340 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 PARP9Q8IXQ6 854 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 NKX2-3Q8TAU0 364 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 GPT2Q8TD30 523 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 ANKS1AQ92625 1134 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 LRCH3Q96II8 777 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 TMUB1Q9BVT8 246 aa8.07□□□□□ -1.12
RFC4-209ENST00000448497 CCDC69A6NI79 296 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 MINDY4BA8MYZ0 360 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 CPLX1O14810 134 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 CALM1P0DP23 149 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 CALM2P0DP24 149 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 CALM3P0DP25 149 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 NCLP19338 710 aaKnown RBP8.06□□□□□ -1.12
RFC4-209ENST00000448497 METAP2P50579 478 aaKnown RBP eCLIP8.06□□□□□ -1.12
RFC4-209ENST00000448497 RHBDL3P58872 404 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 CCT2P78371 535 aaKnown RBP8.06□□□□□ -1.12
RFC4-209ENST00000448497 L1TD1Q5T7N2 865 aaKnown RBP8.06□□□□□ -1.12
RFC4-209ENST00000448497 MSL1Q68DK7 614 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 HHIPL2Q6UWX4 724 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 SYNE3Q6ZMZ3 975 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 SAMD7Q7Z3H4 446 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 IQCA1Q86XH1 822 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 SUPT20HQ8NEM7 779 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 FBXO18Q8NFZ0 1043 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 WNT2BQ93097 391 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 SYAP1Q96A49 352 aaPredicted RBP8.06□□□□□ -1.12
RFC4-209ENST00000448497 MAP3K14Q99558 947 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 UBAC1Q9BSL1 405 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 VPS33BQ9H267 617 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 ZNF287Q9HBT7 754 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 NCOA5Q9HCD5 579 aaKnown RBP8.06□□□□□ -1.12
RFC4-209ENST00000448497 FAM217BQ9NTX9 383 aaPredicted RBP8.06□□□□□ -1.12
RFC4-209ENST00000448497 TCP11L1Q9NUJ3 509 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.06□□□□□ -1.12
RFC4-209ENST00000448497 CFAP45Q9UL16 551 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 CNPY2Q9Y2B0 182 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 SLC12A7Q9Y666 1083 aa8.06□□□□□ -1.12
RFC4-209ENST00000448497 GREB1LQ9C091 1923 aaPredicted RBP8.05□□□□□ -1.12
RFC4-209ENST00000448497 GOLGA8AA7E2F4 631 aa8.05□□□□□ -1.12
RFC4-209ENST00000448497 H3BQV1 296 aa8.05□□□□□ -1.12
RFC4-209ENST00000448497 DDAH1O94760 285 aa8.05□□□□□ -1.12
RFC4-209ENST00000448497 DNM1Q05193 864 aaKnown RBP8.05□□□□□ -1.12
RFC4-209ENST00000448497 DIXDC1Q155Q3 683 aa8.05□□□□□ -1.12
RFC4-209ENST00000448497 GRIK5Q16478 980 aa8.05□□□□□ -1.12
RFC4-209ENST00000448497 SWT1Q5T5J6 900 aaKnown RBP8.05□□□□□ -1.12
RFC4-209ENST00000448497 IFFO2Q5TF58 517 aa8.05□□□□□ -1.12
RFC4-209ENST00000448497 STRIP1Q5VSL9 837 aa8.05□□□□□ -1.12
RFC4-209ENST00000448497 FOXD4L5Q5VV16 416 aaPredicted RBP8.05□□□□□ -1.12
RFC4-209ENST00000448497 NFXL1Q6ZNB6 911 aa8.05□□□□□ -1.12
RFC4-209ENST00000448497 BRAPQ7Z569 592 aa8.05□□□□□ -1.12
RFC4-209ENST00000448497 DGKHQ86XP1 1220 aa8.05□□□□□ -1.12
RFC4-209ENST00000448497 AMOTL1Q8IY63 956 aa8.05□□□□□ -1.12
RFC4-209ENST00000448497 ZNF654Q8IZM8 581 aa8.05□□□□□ -1.12
RFC4-209ENST00000448497 ENAHQ8N8S7 591 aaPredicted RBP8.05□□□□□ -1.12
RFC4-209ENST00000448497 FOXD4L4Q8WXT5 416 aaPredicted RBP8.05□□□□□ -1.12
RFC4-209ENST00000448497 WASF1Q92558 559 aa8.05□□□□□ -1.12
RFC4-209ENST00000448497 ZNF622Q969S3 477 aaKnown RBP eCLIP8.05□□□□□ -1.124e-10■□□□□ 8.7
RFC4-209ENST00000448497 GPR101Q96P66 508 aaPredicted RBP8.05□□□□□ -1.12
RFC4-209ENST00000448497 ZSCAN10Q96SZ4 725 aaPredicted RBP8.05□□□□□ -1.12
RFC4-209ENST00000448497 INCENPQ9NQS7 918 aa8.05□□□□□ -1.12
RFC4-209ENST00000448497 ORC3Q9UBD5 711 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms