RNA–Protein interactions for RNA: ENST00000448282.6

SMIM8-205, Transcript of small integral membrane protein 8, humanhuman

TSL 1 (best)

Gene SMIM8, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-205ENST00000448282 SYNPO2Q9UMS6 1093 aa13.88□□□□□ -0.19
SMIM8-205ENST00000448282 STX8Q9UNK0 236 aa13.88□□□□□ -0.19
SMIM8-205ENST00000448282 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.88□□□□□ -0.19
SMIM8-205ENST00000448282 GOLGA8BA8MQT2 603 aa13.87□□□□□ -0.19
SMIM8-205ENST00000448282 PPP1R12BO60237 982 aaPredicted RBP13.87□□□□□ -0.19
SMIM8-205ENST00000448282 CTNND1O60716 968 aaKnown RBP13.87□□□□□ -0.19
SMIM8-205ENST00000448282 PFKFB2O60825 505 aa13.87□□□□□ -0.19
SMIM8-205ENST00000448282 DDAH1O94760 285 aa13.87□□□□□ -0.19
SMIM8-205ENST00000448282 TTLL1O95922 423 aa13.87□□□□□ -0.19
SMIM8-205ENST00000448282 ASNSP08243 561 aa13.87□□□□□ -0.19
SMIM8-205ENST00000448282 TOP1P11387 765 aaKnown RBP13.87□□□□□ -0.19
SMIM8-205ENST00000448282 APOBRQ0VD83 1088 aa13.87□□□□□ -0.19
SMIM8-205ENST00000448282 NBPF12Q5TAG4 269 aaPredicted RBP13.87□□□□□ -0.19
SMIM8-205ENST00000448282 USP48Q86UV5 1035 aa13.87□□□□□ -0.19
SMIM8-205ENST00000448282 LDHDQ86WU2 507 aa13.87□□□□□ -0.19
SMIM8-205ENST00000448282 MTMR4Q9NYA4 1195 aa13.87□□□□□ -0.19
SMIM8-205ENST00000448282 MYH1P12882 1939 aa13.87□□□□□ -0.19
SMIM8-205ENST00000448282 BAZ2AQ9UIF9 1905 aaKnown RBP13.87□□□□□ -0.19
SMIM8-205ENST00000448282 IGKV6D-41A0A0C4DH26 115 aa13.86□□□□□ -0.19
SMIM8-205ENST00000448282 FAM196BA6NMK8 535 aa13.86□□□□□ -0.19
SMIM8-205ENST00000448282 CDKL5O76039 1030 aa13.86□□□□□ -0.19
SMIM8-205ENST00000448282 PDIA3P30101 505 aaKnown RBP13.86□□□□□ -0.19
SMIM8-205ENST00000448282 METAP2P50579 478 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMIM8-205ENST00000448282 CUL4AQ13619 759 aa13.86□□□□□ -0.19
SMIM8-205ENST00000448282 COL9A3Q14050 684 aaPredicted RBP13.86□□□□□ -0.19
SMIM8-205ENST00000448282 APOA5Q6Q788 366 aa13.86□□□□□ -0.19
SMIM8-205ENST00000448282 MIGA2Q7L4E1 593 aa13.86□□□□□ -0.19
SMIM8-205ENST00000448282 LLPHQ9BRT6 129 aaKnown RBP13.86□□□□□ -0.19
SMIM8-205ENST00000448282 SH2D4AQ9H788 454 aa13.86□□□□□ -0.19
SMIM8-205ENST00000448282 IL17RBQ9NRM6 502 aa13.86□□□□□ -0.19
SMIM8-205ENST00000448282 CDK5RAP2Q96SN8 1893 aa13.86□□□□□ -0.19
SMIM8-205ENST00000448282 ADM5C9JUS6 153 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 CPLX1O14810 134 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 GH2P01242 217 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 KIF5BP33176 963 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 CAP2P40123 477 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 NOVP48745 357 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 ICA1Q05084 483 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 ME3Q16798 604 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 ZNF654Q8IZM8 581 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 CTCFLQ8NI51 663 aaPredicted RBP13.85□□□□□ -0.19
SMIM8-205ENST00000448282 GTF3C6Q969F1 213 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 CDCA5Q96FF9 252 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 CEP95Q96GE4 821 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 MAP3K14Q99558 947 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 ARHGEF10LQ9HCE6 1279 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 GPHNQ9NQX3 736 aaPredicted RBP13.85□□□□□ -0.19
SMIM8-205ENST00000448282 RBM28Q9NW13 759 aaKnown RBP13.85□□□□□ -0.19
SMIM8-205ENST00000448282 NYAP2Q9P242 653 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 BRPF3Q9ULD4 1205 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 ZBTB21Q9ULJ3 1066 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 KIF3AQ9Y496 699 aa13.85□□□□□ -0.19
SMIM8-205ENST00000448282 GOLGA8AA7E2F4 631 aa13.84□□□□□ -0.19
SMIM8-205ENST00000448282 NMT2O60551 498 aa13.84□□□□□ -0.19
SMIM8-205ENST00000448282 GDF11O95390 407 aa13.84□□□□□ -0.19
SMIM8-205ENST00000448282 IREB2P48200 963 aaKnown RBP13.84□□□□□ -0.19
SMIM8-205ENST00000448282 GNAQP50148 359 aa13.84□□□□□ -0.19
SMIM8-205ENST00000448282 RAB3GAP1Q15042 981 aa13.84□□□□□ -0.19
SMIM8-205ENST00000448282 RCSD1Q6JBY9 416 aa13.84□□□□□ -0.19
SMIM8-205ENST00000448282 CDAN1Q8IWY9 1227 aa13.84□□□□□ -0.19
SMIM8-205ENST00000448282 PNMA1Q8ND90 353 aa13.84□□□□□ -0.19
SMIM8-205ENST00000448282 NKX2-3Q8TAU0 364 aa13.84□□□□□ -0.19
SMIM8-205ENST00000448282 TMEM47Q9BQJ4 181 aa13.84□□□□□ -0.19
SMIM8-205ENST00000448282 LARP6Q9BRS8 491 aaKnown RBP13.84□□□□□ -0.19
SMIM8-205ENST00000448282 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMIM8-205ENST00000448282 CWC22Q9HCG8 908 aaKnown RBP13.84□□□□□ -0.19
SMIM8-205ENST00000448282 PICK1Q9NRD5 415 aa13.84□□□□□ -0.19
SMIM8-205ENST00000448282 CLIP2Q9UDT6 1046 aa13.84□□□□□ -0.19
SMIM8-205ENST00000448282 ZNF112Q9UJU3 913 aa13.84□□□□□ -0.19
SMIM8-205ENST00000448282 SCAF8Q9UPN6 1271 aaKnown RBP13.84□□□□□ -0.19
SMIM8-205ENST00000448282 GOLGB1Q14789 3259 aaKnown RBP13.83□□□□□ -0.2
SMIM8-205ENST00000448282 UNCXA6NJT0 531 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 PHF20L1A8MW92 1017 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 PDIA4P13667 645 aaKnown RBP13.83□□□□□ -0.2
SMIM8-205ENST00000448282 ATP2B2Q01814 1243 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 STK3Q13188 491 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 SEPT2Q15019 361 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 RTN1Q16799 776 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 MICU3Q86XE3 530 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 CCDC83Q8IWF9 413 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 SCYL3Q8IZE3 742 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 FANCBQ8NB91 859 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 NUP133Q8WUM0 1156 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 MKL1Q969V6 931 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 WRNIP1Q96S55 665 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 LZTS2Q9BRK4 669 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 AS3MTQ9HBK9 375 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 NMRK2Q9NPI5 230 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 SMC3Q9UQE7 1217 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 NID2Q14112 1375 aa13.83□□□□□ -0.2
SMIM8-205ENST00000448282 FKBP1BP68106 108 aa13.82□□□□□ -0.2
SMIM8-205ENST00000448282 HMGN5P82970 282 aaKnown RBP13.82□□□□□ -0.2
SMIM8-205ENST00000448282 TROAPQ12815 778 aa13.82□□□□□ -0.2
SMIM8-205ENST00000448282 NOL9Q5SY16 702 aaKnown RBP13.82□□□□□ -0.2
SMIM8-205ENST00000448282 CHADLQ6NUI6 762 aa13.82□□□□□ -0.2
SMIM8-205ENST00000448282 ARMC9Q7Z3E5 817 aa13.82□□□□□ -0.2
SMIM8-205ENST00000448282 NECAB1Q8N987 351 aa13.82□□□□□ -0.2
SMIM8-205ENST00000448282 ZNF526Q8TF50 670 aaPredicted RBP13.82□□□□□ -0.2
SMIM8-205ENST00000448282 KLRG1Q96E93 195 aa13.82□□□□□ -0.2
SMIM8-205ENST00000448282 GLIS2Q9BZE0 524 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms