RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 MAGEA9P43362 315 aa23.18■■□□□ 1.3
SMARCD2-203ENST00000448276 TTC31Q49AM3 519 aaPredicted RBP23.18■■□□□ 1.3
SMARCD2-203ENST00000448276 RILPL1Q5EBL4 403 aa23.18■■□□□ 1.3
SMARCD2-203ENST00000448276 EARS2Q5JPH6 523 aaKnown RBP23.18■■□□□ 1.3
SMARCD2-203ENST00000448276 BLZF1Q9H2G9 400 aa23.18■■□□□ 1.3
SMARCD2-203ENST00000448276 TTF2Q9UNY4 1162 aaKnown RBP23.18■■□□□ 1.3
SMARCD2-203ENST00000448276 PPP1R3GB7ZBB8 358 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 METTL24Q5JXM2 366 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 NUP133Q8WUM0 1156 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 TAB2Q9NYJ8 693 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 TMEM94Q12767 1356 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 RPS6KA5O75582 802 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 WHAMMP3Q1A5X7 153 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 SGMS1Q86VZ5 419 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 CAPZA3Q96KX2 299 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 RABEP2Q9H5N1 569 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 ABHD10Q9NUJ1 306 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 N4BP3O15049 544 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 IFNAR1P17181 557 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 GTF2A1P52655 376 aaPredicted RBP23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 PIP4K2BP78356 416 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 AMPD2Q01433 879 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 KRT31Q15323 416 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 FILIP1LQ4L180 1135 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 NOM1Q5C9Z4 860 aaKnown RBP23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 CNGA4Q8IV77 575 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 GOLGA6L1Q8N7Z2 621 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 EPB41L4AQ9HCS5 686 aaPredicted RBP23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 STRN4Q9NRL3 753 aa23.17■■□□□ 1.3
SMARCD2-203ENST00000448276 SYMPKQ92797 1274 aaKnown RBP23.16■■□□□ 1.3
SMARCD2-203ENST00000448276 SHISA4Q96DD7 197 aa23.16■■□□□ 1.3
SMARCD2-203ENST00000448276 SPEF2Q9C093 1822 aa23.16■■□□□ 1.3
SMARCD2-203ENST00000448276 MMS19Q96T76 1030 aa23.16■■□□□ 1.3
SMARCD2-203ENST00000448276 MAPK8IP1Q9UQF2 711 aa23.16■■□□□ 1.3
SMARCD2-203ENST00000448276 PDE6AP16499 860 aa23.15■■□□□ 1.3
SMARCD2-203ENST00000448276 MYH8P13535 1937 aa23.15■■□□□ 1.3
SMARCD2-203ENST00000448276 RTN1Q16799 776 aa23.15■■□□□ 1.3
SMARCD2-203ENST00000448276 KANK3Q6NY19 840 aa23.15■■□□□ 1.3
SMARCD2-203ENST00000448276 AIDAQ96BJ3 306 aa23.15■■□□□ 1.3
SMARCD2-203ENST00000448276 FOXP1Q9H334 677 aaPredicted RBP23.15■■□□□ 1.3
SMARCD2-203ENST00000448276 REXO2Q9Y3B8 237 aaKnown RBP23.15■■□□□ 1.3
SMARCD2-203ENST00000448276 PRKAB2O43741 272 aa23.14■■□□□ 1.3
SMARCD2-203ENST00000448276 ICE2Q659A1 982 aa23.14■■□□□ 1.3
SMARCD2-203ENST00000448276 TRIM22Q8IYM9 498 aa23.14■■□□□ 1.3
SMARCD2-203ENST00000448276 GBP3Q9H0R5 595 aa23.14■■□□□ 1.3
SMARCD2-203ENST00000448276 TJP1Q07157 1748 aa23.14■■□□□ 1.29
SMARCD2-203ENST00000448276 PRDM1O75626 825 aa23.14■■□□□ 1.29
SMARCD2-203ENST00000448276 KRT9P35527 623 aa23.14■■□□□ 1.29
SMARCD2-203ENST00000448276 IRX3P78415 501 aaPredicted RBP23.14■■□□□ 1.29
SMARCD2-203ENST00000448276 IFIT5Q13325 482 aaKnown RBP23.14■■□□□ 1.29
SMARCD2-203ENST00000448276 TMTC1Q8IUR5 882 aa23.14■■□□□ 1.29
SMARCD2-203ENST00000448276 ZNF579Q8NAF0 562 aaKnown RBP23.14■■□□□ 1.29
SMARCD2-203ENST00000448276 AFAP1L1Q8TED9 768 aa23.14■■□□□ 1.29
SMARCD2-203ENST00000448276 STRBPQ96SI9 672 aaKnown RBP23.14■■□□□ 1.29
SMARCD2-203ENST00000448276 PHKA1P46020 1223 aa23.13■■□□□ 1.29
SMARCD2-203ENST00000448276 CORO7P57737 925 aa23.13■■□□□ 1.29
SMARCD2-203ENST00000448276 DRC1Q96MC2 740 aa23.13■■□□□ 1.29
SMARCD2-203ENST00000448276 ARMT1Q9H993 441 aa23.13■■□□□ 1.29
SMARCD2-203ENST00000448276 MKRN1Q9UHC7 482 aaKnown RBP23.13■■□□□ 1.29
SMARCD2-203ENST00000448276 MAP3K15Q6ZN16 1313 aa23.13■■□□□ 1.29
SMARCD2-203ENST00000448276 STK36Q9NRP7 1315 aa23.13■■□□□ 1.29
SMARCD2-203ENST00000448276 ATP1A1P05023 1023 aaKnown RBP23.13■■□□□ 1.29
SMARCD2-203ENST00000448276 CCDC148Q8NFR7 591 aa23.13■■□□□ 1.29
SMARCD2-203ENST00000448276 WASF1Q92558 559 aa23.13■■□□□ 1.29
SMARCD2-203ENST00000448276 VPS54Q9P1Q0 977 aa23.13■■□□□ 1.29
SMARCD2-203ENST00000448276 JRKLQ9Y4A0 524 aa23.13■■□□□ 1.29
SMARCD2-203ENST00000448276 TUBB2AQ13885 445 aa23.12■■□□□ 1.29
SMARCD2-203ENST00000448276 CYP26C1Q6V0L0 522 aa23.12■■□□□ 1.29
SMARCD2-203ENST00000448276 LDHAL6AQ6ZMR3 332 aa23.12■■□□□ 1.29
SMARCD2-203ENST00000448276 CRACR2BQ8N4Y2 399 aaPredicted RBP23.12■■□□□ 1.29
SMARCD2-203ENST00000448276 MSL3Q8N5Y2 521 aaKnown RBP23.12■■□□□ 1.29
SMARCD2-203ENST00000448276 CTAGE1Q96RT6 745 aa23.12■■□□□ 1.29
SMARCD2-203ENST00000448276 TUBB2BQ9BVA1 445 aa23.12■■□□□ 1.29
SMARCD2-203ENST00000448276 NAPBQ9H115 298 aa23.12■■□□□ 1.29
SMARCD2-203ENST00000448276 HPCAL4Q9UM19 191 aa23.12■■□□□ 1.29
SMARCD2-203ENST00000448276 CAMTA1Q9Y6Y1 1673 aa23.12■■□□□ 1.29
SMARCD2-203ENST00000448276 PRPF6O94906 941 aaKnown RBP23.12■■□□□ 1.29
SMARCD2-203ENST00000448276 MYBL2P10244 700 aa23.12■■□□□ 1.29
SMARCD2-203ENST00000448276 LIFRP42702 1097 aa23.12■■□□□ 1.29
SMARCD2-203ENST00000448276 IFNL3Q8IZI9 196 aa23.12■■□□□ 1.29
SMARCD2-203ENST00000448276 MED4Q9NPJ6 270 aa23.12■■□□□ 1.29
SMARCD2-203ENST00000448276 USP14P54578 494 aa23.11■■□□□ 1.29
SMARCD2-203ENST00000448276 HSPA2P54652 639 aa23.11■■□□□ 1.29
SMARCD2-203ENST00000448276 RRAGBQ5VZM2 374 aa23.11■■□□□ 1.29
SMARCD2-203ENST00000448276 HELBQ8NG08 1087 aaPredicted RBP23.11■■□□□ 1.29
SMARCD2-203ENST00000448276 EHD4Q9H223 541 aa23.11■■□□□ 1.29
SMARCD2-203ENST00000448276 TRPM3Q9HCF6 1732 aaPredicted RBP23.11■■□□□ 1.29
SMARCD2-203ENST00000448276 MBD4O95243 580 aa23.11■■□□□ 1.29
SMARCD2-203ENST00000448276 GGCXP38435 758 aa23.11■■□□□ 1.29
SMARCD2-203ENST00000448276 ZNF174Q15697 407 aa23.11■■□□□ 1.29
SMARCD2-203ENST00000448276 WDR93Q6P2C0 686 aa23.11■■□□□ 1.29
SMARCD2-203ENST00000448276 MYO5AQ9Y4I1 1855 aaKnown RBP23.11■■□□□ 1.29
SMARCD2-203ENST00000448276 SNAP23O00161 211 aa23.1■■□□□ 1.29
SMARCD2-203ENST00000448276 SH3RF1Q7Z6J0 888 aa23.1■■□□□ 1.29
SMARCD2-203ENST00000448276 MST1RQ04912 1400 aa23.1■■□□□ 1.29
SMARCD2-203ENST00000448276 COPB1P53618 953 aaKnown RBP23.1■■□□□ 1.29
SMARCD2-203ENST00000448276 ACBD3Q9H3P7 528 aa23.1■■□□□ 1.29
SMARCD2-203ENST00000448276 TCRBV5S4A2TA0A5A2 114 aa23.1■■□□□ 1.29
SMARCD2-203ENST00000448276 SMIM22K7EJ46 135 aa23.1■■□□□ 1.29
SMARCD2-203ENST00000448276 FECHP22830 423 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms