RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 SWAP70Q9UH65 585 aa21.3■■□□□ 1
DDX56-207ENST00000448192 CYP2D7A0A087X1C5 515 aa21.29■■□□□ 1
DDX56-207ENST00000448192 USP17L12C9JPN9 530 aa21.29■■□□□ 1
DDX56-207ENST00000448192 USP17L21D6R901 530 aa21.29■■□□□ 1
DDX56-207ENST00000448192 CCL5P13501 91 aa21.29■■□□□ 1
DDX56-207ENST00000448192 GUCY1A2P33402 732 aa21.29■■□□□ 1
DDX56-207ENST00000448192 IRF5Q13568 498 aa21.29■■□□□ 1
DDX56-207ENST00000448192 C12orf42Q96LP6 360 aa21.29■■□□□ 1
DDX56-207ENST00000448192 KIAA1683Q9H0B3 1180 aa21.29■■□□□ 1
DDX56-207ENST00000448192 USP17L15C9J2P7 530 aa21.28■■□□□ 1
DDX56-207ENST00000448192 USP17L13C9JLJ4 530 aa21.28■■□□□ 1
DDX56-207ENST00000448192 USP17L11C9JVI0 530 aa21.28■■□□□ 1
DDX56-207ENST00000448192 USP17L18D6R9N7 530 aa21.28■■□□□ 1
DDX56-207ENST00000448192 USP17L22D6RA61 530 aa21.28■■□□□ 1
DDX56-207ENST00000448192 USP17L17D6RBQ6 530 aa21.28■■□□□ 1
DDX56-207ENST00000448192 USP17L19D6RCP7 530 aa21.28■■□□□ 1
DDX56-207ENST00000448192 USP17L20D6RJB6 530 aa21.28■■□□□ 1
DDX56-207ENST00000448192 USP17L24Q0WX57 530 aa21.28■■□□□ 1
DDX56-207ENST00000448192 C12orf60Q5U649 245 aa21.28■■□□□ 1
DDX56-207ENST00000448192 PRPF38BQ5VTL8 546 aaKnown RBP21.28■■□□□ 1
DDX56-207ENST00000448192 GPRC5AQ8NFJ5 357 aa21.28■■□□□ 1
DDX56-207ENST00000448192 PAGR1Q9BTK6 254 aa21.28■■□□□ 1
DDX56-207ENST00000448192 RNF208Q9H0X6 261 aa21.28■■□□□ 1
DDX56-207ENST00000448192 TXNRD2Q9NNW7 524 aa21.28■■□□□ 1
DDX56-207ENST00000448192 TTC41PQ6P2S7 1318 aa21.28■■□□□ 1
DDX56-207ENST00000448192 SMIM22K7EJ46 135 aa21.27■■□□□ 1
DDX56-207ENST00000448192 RNF113AO15541 343 aaKnown RBP21.27■■□□□ 1
DDX56-207ENST00000448192 OTUD7AQ8TE49 926 aaPredicted RBP21.27■■□□□ 1
DDX56-207ENST00000448192 PXYLP1Q8TE99 480 aa21.27■■□□□ 1
DDX56-207ENST00000448192 RBPJLQ9UBG7 517 aa21.27■■□□□ 1
DDX56-207ENST00000448192 ZBTB47Q9UFB7 747 aaPredicted RBP21.27■■□□□ 1
DDX56-207ENST00000448192 PLXNB2O15031 1838 aa21.27■□□□□ 0.99
DDX56-207ENST00000448192 ERC2O15083 957 aa21.26■□□□□ 0.99
DDX56-207ENST00000448192 INHAP05111 366 aa21.26■□□□□ 0.99
DDX56-207ENST00000448192 VCAM1P19320 739 aa21.26■□□□□ 0.99
DDX56-207ENST00000448192 TMEM179Q6ZVK1 233 aa21.26■□□□□ 0.99
DDX56-207ENST00000448192 CCAR1Q8IX12 1150 aaKnown RBP21.26■□□□□ 0.99
DDX56-207ENST00000448192 GTF3C2Q8WUA4 911 aaPredicted RBP21.26■□□□□ 0.99
DDX56-207ENST00000448192 STRBPQ96SI9 672 aaKnown RBP21.26■□□□□ 0.99
DDX56-207ENST00000448192 UNC93B1Q9H1C4 597 aa21.26■□□□□ 0.99
DDX56-207ENST00000448192 ZFYP08048 801 aaPredicted RBP21.25■□□□□ 0.99
DDX56-207ENST00000448192 AKR1B1P15121 316 aa21.25■□□□□ 0.99
DDX56-207ENST00000448192 CDK8P49336 464 aa21.25■□□□□ 0.99
DDX56-207ENST00000448192 ERVK-9P63128 1117 aa21.25■□□□□ 0.99
DDX56-207ENST00000448192 ERVK-24P63145 666 aa21.25■□□□□ 0.99
DDX56-207ENST00000448192 ANKRD45Q5TZF3 282 aa21.25■□□□□ 0.99
DDX56-207ENST00000448192 CTR9Q6PD62 1173 aa21.25■□□□□ 0.99
DDX56-207ENST00000448192 CATSPERGQ6ZRH7 1159 aa21.25■□□□□ 0.99
DDX56-207ENST00000448192 APPBP2Q92624 585 aa21.25■□□□□ 0.99
DDX56-207ENST00000448192 OSBP2Q969R2 916 aa21.25■□□□□ 0.99
DDX56-207ENST00000448192 A0A1W2PRG0 241 aa21.24■□□□□ 0.99
DDX56-207ENST00000448192 GLRX3O76003 335 aaKnown RBP21.24■□□□□ 0.99
DDX56-207ENST00000448192 GJB1P08034 283 aa21.24■□□□□ 0.99
DDX56-207ENST00000448192 MX1P20591 662 aa21.24■□□□□ 0.99
DDX56-207ENST00000448192 Q3C1V9 767 aa21.24■□□□□ 0.99
DDX56-207ENST00000448192 C16orf86Q6ZW13 317 aa21.24■□□□□ 0.99
DDX56-207ENST00000448192 NKX2-3Q8TAU0 364 aa21.24■□□□□ 0.99
DDX56-207ENST00000448192 PI4K2BQ8TCG2 481 aa21.24■□□□□ 0.99
DDX56-207ENST00000448192 RPAP3Q9H6T3 665 aaPredicted RBP21.24■□□□□ 0.99
DDX56-207ENST00000448192 GJD2Q9UKL4 321 aa21.24■□□□□ 0.99
DDX56-207ENST00000448192 LRRFIP1Q32MZ4 808 aaKnown RBP21.23■□□□□ 0.99
DDX56-207ENST00000448192 POTEEQ6S8J3 1075 aa21.23■□□□□ 0.99
DDX56-207ENST00000448192 CLEC10AQ8IUN9 316 aa21.23■□□□□ 0.99
DDX56-207ENST00000448192 SHISA4Q96DD7 197 aa21.23■□□□□ 0.99
DDX56-207ENST00000448192 CCDC17Q96LX7 622 aa21.23■□□□□ 0.99
DDX56-207ENST00000448192 ARPP21Q9UBL0 812 aaPredicted RBP21.23■□□□□ 0.99
DDX56-207ENST00000448192 GSG1L2A8MUP6 293 aa21.22■□□□□ 0.99
DDX56-207ENST00000448192 GPAA1O43292 621 aa21.22■□□□□ 0.99
DDX56-207ENST00000448192 CYP2B6P20813 491 aa21.22■□□□□ 0.99
DDX56-207ENST00000448192 MAPK4P31152 587 aa21.22■□□□□ 0.99
DDX56-207ENST00000448192 GJA8P48165 433 aa21.22■□□□□ 0.99
DDX56-207ENST00000448192 ICA1Q05084 483 aa21.22■□□□□ 0.99
DDX56-207ENST00000448192 STK11IPQ8N1F8 1099 aa21.22■□□□□ 0.99
DDX56-207ENST00000448192 FSD1Q9BTV5 496 aa21.22■□□□□ 0.99
DDX56-207ENST00000448192 PORCNQ9H237 461 aa21.22■□□□□ 0.99
DDX56-207ENST00000448192 ARHGEF10LQ9HCE6 1279 aa21.22■□□□□ 0.99
DDX56-207ENST00000448192 CWC22Q9HCG8 908 aaKnown RBP21.22■□□□□ 0.99
DDX56-207ENST00000448192 RABGAP1Q9Y3P9 1069 aa21.22■□□□□ 0.99
DDX56-207ENST00000448192 MINDY4BA8MYZ0 360 aa21.21■□□□□ 0.99
DDX56-207ENST00000448192 M0R2C6 588 aa21.21■□□□□ 0.99
DDX56-207ENST00000448192 APPP05067 770 aa21.21■□□□□ 0.99
DDX56-207ENST00000448192 HDAC1Q13547 482 aaPredicted RBP21.21■□□□□ 0.99
DDX56-207ENST00000448192 U2AF1L4Q8WU68 220 aaKnown RBP21.21■□□□□ 0.99
DDX56-207ENST00000448192 GCC1Q96CN9 775 aa21.21■□□□□ 0.99
DDX56-207ENST00000448192 NUDT12Q9BQG2 462 aa21.21■□□□□ 0.99
DDX56-207ENST00000448192 TANGO6Q9C0B7 1094 aa21.21■□□□□ 0.99
DDX56-207ENST00000448192 CNMDO75829 334 aa21.2■□□□□ 0.98
DDX56-207ENST00000448192 HMGCRP04035 888 aa21.2■□□□□ 0.98
DDX56-207ENST00000448192 ATP2B2Q01814 1243 aa21.2■□□□□ 0.98
DDX56-207ENST00000448192 SBK1Q52WX2 424 aa21.2■□□□□ 0.98
DDX56-207ENST00000448192 GIMAP6Q6P9H5 292 aa21.2■□□□□ 0.98
DDX56-207ENST00000448192 SIAH1Q8IUQ4 282 aa21.2■□□□□ 0.98
DDX56-207ENST00000448192 SH2D4AQ9H788 454 aa21.2■□□□□ 0.98
DDX56-207ENST00000448192 SPDYE16A6NNV3 312 aaPredicted RBP21.19■□□□□ 0.98
DDX56-207ENST00000448192 SGPL1O95470 568 aa21.19■□□□□ 0.98
DDX56-207ENST00000448192 GNAT2P19087 354 aa21.19■□□□□ 0.98
DDX56-207ENST00000448192 TDO2P48775 406 aa21.19■□□□□ 0.98
DDX56-207ENST00000448192 CCNA1P78396 465 aa21.19■□□□□ 0.98
DDX56-207ENST00000448192 KIAA1755Q5JYT7 1200 aa21.19■□□□□ 0.98
DDX56-207ENST00000448192 WDR78Q5VTH9 848 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms