RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	IGLV1-40	P01703	118 aa		4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	UBTFL1	P0CB47	393 aa	Predicted RBP	4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	GSPT1	P15170	499 aa	Known RBP	4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	MCC	P23508	829 aa		4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	MCM4	P33991	863 aa		4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	FAM26D	Q5JW98	314 aa		4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	G2E3	Q7L622	706 aa		4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	ARHGEF25	Q86VW2	580 aa		4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	ETFBKMT	Q8IXQ9	262 aa		4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	ARMC10	Q8N2F6	343 aa		4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	GALNT11	Q8NCW6	608 aa		4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	UBL7	Q96S82	380 aa	Predicted RBP	4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	LRRCC1	Q9C099	1032 aa		4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	RAX	Q9Y2V3	346 aa		4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	DCC	P43146	1447 aa		4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	CACNA1F	O60840	1977 aa		4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	C1orf167	Q5SNV9	1468 aa		4.94	□□□□□ -1.62
PTPN12-208	ENST00000447995	N4BP2	Q86UW6	1770 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	ABCC6	O95255	1503 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	LMO7	Q8WWI1	1683 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	ZBTB7C	A1YPR0	619 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995		F6X3S4	739 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	GOLGA6L22	H0YM25	854 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	GSC2	O15499	205 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	EPB41L2	O43491	1005 aa	Known RBP	4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	ALDH1L1	O75891	902 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	DDX58	O95786	925 aa	Known RBP	4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	GC	P02774	474 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	ATF3	P18847	181 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	SDS	P20132	328 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	MCM2	P49736	904 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	PDE1A	P54750	535 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	EIF4A1	P60842	406 aa	Known RBP	4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	ATP11A	P98196	1134 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	SKOR2	Q2VWA4	1001 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	COL13A1	Q5TAT6	717 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	NBPF6	Q5VWK0	638 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	ADAMTSL4	Q6UY14	1074 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	KRT28	Q7Z3Y7	464 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	CACTIN-AS1	Q8N1I8	211 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	USHBP1	Q8N6Y0	703 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	ANKRD24	Q8TF21	1146 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	NBPF4	Q96M43	638 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	RBSN	Q9H1K0	784 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	C19orf44	Q9H6X5	657 aa		4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	DBF4	Q9UBU7	674 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	ISY1	Q9ULR0	285 aa	Known RBP	4.93	□□□□□ -1.62
PTPN12-208	ENST00000447995	CAMTA1	Q9Y6Y1	1673 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	IBTK	Q9P2D0	1353 aa	Predicted RBP	4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	KDM3B	Q7LBC6	1761 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	TNFRSF10B	O14763	440 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	RNMT	O43148	476 aa	Known RBP	4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	SMARCA5	O60264	1052 aa	Predicted RBP	4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	PTCD1	O75127	700 aa	Known RBP	4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	SPINK2	P20155	84 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	MX1	P20591	662 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	DDIT3	P35638	169 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	ACAD11	Q709F0	780 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	ZDHHC13	Q8IUH4	622 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	OR13H1	Q8NG92	308 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	SSH3	Q8TE77	659 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	DNAAF4	Q8WXU2	420 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	RAPGEF4	Q8WZA2	1011 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	FMNL2	Q96PY5	1086 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	KIF2C	Q99661	725 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	USP26	Q9BXU7	913 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	SAP130	Q9H0E3	1048 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	MUC3B	Q9H195	1237 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	CWC22	Q9HCG8	908 aa	Known RBP	4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	HYPK	Q9NX55	129 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	KCNK4	Q9NYG8	393 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	STAP2	Q9UGK3	403 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	SPG7	Q9UQ90	795 aa		4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	LRRFIP2	Q9Y608	721 aa	Known RBP	4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	OAS3	Q9Y6K5	1087 aa	Known RBP	4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.92	□□□□□ -1.62
PTPN12-208	ENST00000447995	LINC01387	J3KSC0	135 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	PAX4	O43316	350 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	EIF2S2	P20042	333 aa	Known RBP	4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	ANAPC15	P60006	121 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	NUCB2	P80303	420 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	RAB3GAP1	Q15042	981 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	OCLN	Q16625	522 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	UVSSA	Q2YD98	709 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	TXNDC11	Q6PKC3	985 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	ERC1	Q8IUD2	1116 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	FAM200A	Q8TCP9	573 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	KIF1BP	Q96EK5	621 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	GPATCH3	Q96I76	525 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	ORAI2	Q96SN7	254 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	USP44	Q9H0E7	712 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	LGR6	Q9HBX8	967 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	NOVA2	Q9UNW9	492 aa	Known RBP	4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	EXOC6B	Q9Y2D4	811 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	PPME1	Q9Y570	386 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	NPHP3	Q7Z494	1330 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	SALL3	Q9BXA9	1300 aa		4.91	□□□□□ -1.62
PTPN12-208	ENST00000447995	GOLGA6L3	A6NEY3	463 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms