RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 GH2P01242 217 aa22.89■■□□□ 1.25
SGCE-207ENST00000447873 NF2P35240 595 aa22.89■■□□□ 1.25
SGCE-207ENST00000447873 SLC4A3P48751 1232 aa22.89■■□□□ 1.25
SGCE-207ENST00000447873 PPP4R3BQ5MIZ7 849 aa22.89■■□□□ 1.25
SGCE-207ENST00000447873 RCSD1Q6JBY9 416 aa22.89■■□□□ 1.25
SGCE-207ENST00000447873 SYNE3Q6ZMZ3 975 aa22.89■■□□□ 1.25
SGCE-207ENST00000447873 ANKS1AQ92625 1134 aa22.89■■□□□ 1.25
SGCE-207ENST00000447873 MTMR4Q9NYA4 1195 aa22.89■■□□□ 1.25
SGCE-207ENST00000447873 SSC5DA1L4H1 1573 aa22.88■■□□□ 1.25
SGCE-207ENST00000447873 CAP2P40123 477 aa22.88■■□□□ 1.25
SGCE-207ENST00000447873 STK3Q13188 491 aa22.88■■□□□ 1.25
SGCE-207ENST00000447873 RAB3GAP1Q15042 981 aa22.88■■□□□ 1.25
SGCE-207ENST00000447873 SHROOM1Q2M3G4 852 aaPredicted RBP22.88■■□□□ 1.25
SGCE-207ENST00000447873 KAT14Q9H8E8 782 aa22.88■■□□□ 1.25
SGCE-207ENST00000447873 KANSL2Q9H9L4 492 aa22.88■■□□□ 1.25
SGCE-207ENST00000447873 ATAD5Q96QE3 1844 aa22.88■■□□□ 1.25
SGCE-207ENST00000447873 GOLGA8BA8MQT2 603 aa22.87■■□□□ 1.25
SGCE-207ENST00000447873 HSP90AA1P07900 732 aaKnown RBP22.87■■□□□ 1.25
SGCE-207ENST00000447873 PDIA3P30101 505 aaKnown RBP22.87■■□□□ 1.25
SGCE-207ENST00000447873 SEPT2Q15019 361 aa22.87■■□□□ 1.25
SGCE-207ENST00000447873 APOA5Q6Q788 366 aa22.87■■□□□ 1.25
SGCE-207ENST00000447873 CATIPQ7Z7H3 387 aa22.87■■□□□ 1.25
SGCE-207ENST00000447873 SLKQ9H2G2 1235 aaPredicted RBP22.87■■□□□ 1.25
SGCE-207ENST00000447873 MYH4Q9Y623 1939 aa22.86■■□□□ 1.25
SGCE-207ENST00000447873 ZBTB43O43298 467 aa22.86■■□□□ 1.25
SGCE-207ENST00000447873 CTNND1O60716 968 aaKnown RBP22.86■■□□□ 1.25
SGCE-207ENST00000447873 TTLL1O95922 423 aa22.86■■□□□ 1.25
SGCE-207ENST00000447873 JAG1P78504 1218 aa22.86■■□□□ 1.25
SGCE-207ENST00000447873 TMEM47Q9BQJ4 181 aa22.86■■□□□ 1.25
SGCE-207ENST00000447873 ZBTB21Q9ULJ3 1066 aa22.86■■□□□ 1.25
SGCE-207ENST00000447873 PPP1R12BO60237 982 aaPredicted RBP22.85■■□□□ 1.25
SGCE-207ENST00000447873 ASNSP08243 561 aa22.85■■□□□ 1.25
SGCE-207ENST00000447873 TOP1P11387 765 aaKnown RBP22.85■■□□□ 1.25
SGCE-207ENST00000447873 GUCY1A2P33402 732 aa22.85■■□□□ 1.25
SGCE-207ENST00000447873 NOVP48745 357 aa22.85■■□□□ 1.25
SGCE-207ENST00000447873 PRKG1Q13976 671 aa22.85■■□□□ 1.25
SGCE-207ENST00000447873 MICU3Q86XE3 530 aa22.85■■□□□ 1.25
SGCE-207ENST00000447873 CLEC10AQ8IUN9 316 aa22.85■■□□□ 1.25
SGCE-207ENST00000447873 ZNF654Q8IZM8 581 aa22.85■■□□□ 1.25
SGCE-207ENST00000447873 NECAB1Q8N987 351 aa22.85■■□□□ 1.25
SGCE-207ENST00000447873 WRNIP1Q96S55 665 aa22.85■■□□□ 1.25
SGCE-207ENST00000447873 GPBP1L1Q9HC44 474 aaPredicted RBP22.85■■□□□ 1.25
SGCE-207ENST00000447873 ZNF112Q9UJU3 913 aa22.85■■□□□ 1.25
SGCE-207ENST00000447873 FZD1Q9UP38 647 aa22.85■■□□□ 1.25
SGCE-207ENST00000447873 PFKFB2O60825 505 aa22.84■■□□□ 1.25
SGCE-207ENST00000447873 ATP2B2Q01814 1243 aa22.84■■□□□ 1.25
SGCE-207ENST00000447873 ICA1Q05084 483 aa22.84■■□□□ 1.25
SGCE-207ENST00000447873 RAB11FIP4Q86YS3 637 aa22.84■■□□□ 1.25
SGCE-207ENST00000447873 KLRG1Q96E93 195 aa22.84■■□□□ 1.25
SGCE-207ENST00000447873 MYL10Q9BUA6 226 aa22.84■■□□□ 1.25
SGCE-207ENST00000447873 CLIP2Q9UDT6 1046 aa22.84■■□□□ 1.25
SGCE-207ENST00000447873 INPP5BP32019 993 aa22.84■■□□□ 1.25
SGCE-207ENST00000447873 METAP2P50579 478 aaKnown RBP eCLIP22.84■■□□□ 1.25
SGCE-207ENST00000447873 CCT2P78371 535 aaKnown RBP22.84■■□□□ 1.25
SGCE-207ENST00000447873 PNMA1Q8ND90 353 aa22.84■■□□□ 1.25
SGCE-207ENST00000447873 NUP133Q8WUM0 1156 aa22.84■■□□□ 1.25
SGCE-207ENST00000447873 GTF3C6Q969F1 213 aa22.84■■□□□ 1.25
SGCE-207ENST00000447873 GINM1Q9NU53 330 aa22.84■■□□□ 1.25
SGCE-207ENST00000447873 HPS5Q9UPZ3 1129 aa22.84■■□□□ 1.25
SGCE-207ENST00000447873 USP2O75604 605 aaPredicted RBP22.83■■□□□ 1.25
SGCE-207ENST00000447873 CALM1P0DP23 149 aa22.83■■□□□ 1.25
SGCE-207ENST00000447873 CALM2P0DP24 149 aa22.83■■□□□ 1.25
SGCE-207ENST00000447873 CALM3P0DP25 149 aa22.83■■□□□ 1.25
SGCE-207ENST00000447873 EEF2P13639 858 aaKnown RBP22.83■■□□□ 1.25
SGCE-207ENST00000447873 RXRAP19793 462 aa22.83■■□□□ 1.25
SGCE-207ENST00000447873 RCAN1P53805 252 aa22.83■■□□□ 1.25
SGCE-207ENST00000447873 SCRN1Q12765 414 aa22.83■■□□□ 1.25
SGCE-207ENST00000447873 CUL4AQ13619 759 aa22.83■■□□□ 1.25
SGCE-207ENST00000447873 CCDC83Q8IWF9 413 aa22.83■■□□□ 1.25
SGCE-207ENST00000447873 SPRYD3Q8NCJ5 442 aa22.83■■□□□ 1.25
SGCE-207ENST00000447873 NYAP2Q9P242 653 aa22.83■■□□□ 1.25
SGCE-207ENST00000447873 DOCK1Q14185 1865 aa22.83■■□□□ 1.24
SGCE-207ENST00000447873 GOLGA8AA7E2F4 631 aa22.82■■□□□ 1.24
SGCE-207ENST00000447873 DDAH1O94760 285 aa22.82■■□□□ 1.24
SGCE-207ENST00000447873 CCDC144CPQ8IYA2 1237 aa22.82■■□□□ 1.24
SGCE-207ENST00000447873 CHMP4CQ96CF2 233 aa22.82■■□□□ 1.24
SGCE-207ENST00000447873 TRAF5O00463 557 aa22.81■■□□□ 1.24
SGCE-207ENST00000447873 TROAPQ12815 778 aa22.81■■□□□ 1.24
SGCE-207ENST00000447873 TTLL12Q14166 644 aaPredicted RBP22.81■■□□□ 1.24
SGCE-207ENST00000447873 CHADLQ6NUI6 762 aa22.81■■□□□ 1.24
SGCE-207ENST00000447873 SCYL3Q8IZE3 742 aa22.81■■□□□ 1.24
SGCE-207ENST00000447873 LRRC47Q8N1G4 583 aaKnown RBP22.81■■□□□ 1.24
SGCE-207ENST00000447873 ZKSCAN4Q969J2 545 aaPredicted RBP22.81■■□□□ 1.24
SGCE-207ENST00000447873 NCOA5Q9HCD5 579 aaKnown RBP22.81■■□□□ 1.24
SGCE-207ENST00000447873 FOXD4L1Q9NU39 408 aa22.81■■□□□ 1.24
SGCE-207ENST00000447873 DHX16O60231 1041 aaKnown RBP22.8■■□□□ 1.24
SGCE-207ENST00000447873 IREB2P48200 963 aaKnown RBP22.8■■□□□ 1.24
SGCE-207ENST00000447873 FANCBQ8NB91 859 aa22.8■■□□□ 1.24
SGCE-207ENST00000447873 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.8■■□□□ 1.24
SGCE-207ENST00000447873 MKL1Q969V6 931 aa22.8■■□□□ 1.24
SGCE-207ENST00000447873 ARHGEF10LQ9HCE6 1279 aa22.8■■□□□ 1.24
SGCE-207ENST00000447873 PICK1Q9NRD5 415 aa22.8■■□□□ 1.24
SGCE-207ENST00000447873 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.8■■□□□ 1.24
SGCE-207ENST00000447873 ST3GAL1Q11201 340 aa22.8■■□□□ 1.24
SGCE-207ENST00000447873 RTN1Q16799 776 aa22.8■■□□□ 1.24
SGCE-207ENST00000447873 SIAH1Q8IUQ4 282 aa22.8■■□□□ 1.24
SGCE-207ENST00000447873 INTS4Q96HW7 963 aaKnown RBP22.8■■□□□ 1.24
SGCE-207ENST00000447873 ZNF408Q9H9D4 720 aa22.8■■□□□ 1.24
SGCE-207ENST00000447873 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.8■■□□□ 1.24
SGCE-207ENST00000447873 MTMR7Q9Y216 660 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms