RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 TBC1D8BQ0IIM8 1120 aa21.64■■□□□ 1.06
HMGA1-205ENST00000447654 CCDC40Q4G0X9 1142 aa21.64■■□□□ 1.06
HMGA1-205ENST00000447654 NOA1Q8NC60 698 aaKnown RBP21.64■■□□□ 1.06
HMGA1-205ENST00000447654 ITFG2Q969R8 447 aa21.64■■□□□ 1.06
HMGA1-205ENST00000447654 SPATS2LQ9NUQ6 558 aaKnown RBP21.64■■□□□ 1.06
HMGA1-205ENST00000447654 NDUFB9Q9Y6M9 179 aa21.64■■□□□ 1.06
HMGA1-205ENST00000447654 NUP188Q5SRE5 1749 aa21.64■■□□□ 1.06
HMGA1-205ENST00000447654 H7C1W4 665 aa21.64■■□□□ 1.05
HMGA1-205ENST00000447654 ZNF18P17022 549 aa21.64■■□□□ 1.05
HMGA1-205ENST00000447654 AP1ARQ63HQ0 302 aa21.64■■□□□ 1.05
HMGA1-205ENST00000447654 LMBR1LQ6UX01 489 aa21.64■■□□□ 1.05
HMGA1-205ENST00000447654 SLC35F6Q8N357 371 aa21.64■■□□□ 1.05
HMGA1-205ENST00000447654 ACTR5Q9H9F9 607 aaPredicted RBP21.64■■□□□ 1.05
HMGA1-205ENST00000447654 DBNLQ9UJU6 430 aaKnown RBP21.64■■□□□ 1.05
HMGA1-205ENST00000447654 GOLGA6BA6NDN3 693 aa21.63■■□□□ 1.05
HMGA1-205ENST00000447654 NDUFAB1O14561 156 aa21.63■■□□□ 1.05
HMGA1-205ENST00000447654 PFKFB1P16118 471 aa21.63■■□□□ 1.05
HMGA1-205ENST00000447654 SLC8A1P32418 973 aa21.63■■□□□ 1.05
HMGA1-205ENST00000447654 MAB21L3Q8N8X9 362 aa21.63■■□□□ 1.05
HMGA1-205ENST00000447654 PIGBQ92521 554 aa21.63■■□□□ 1.05
HMGA1-205ENST00000447654 TATDN2Q93075 761 aa21.63■■□□□ 1.05
HMGA1-205ENST00000447654 SNCBQ16143 134 aa21.63■■□□□ 1.05
HMGA1-205ENST00000447654 TLDC1Q6P9B6 456 aa21.63■■□□□ 1.05
HMGA1-205ENST00000447654 TAX1BP1Q86VP1 789 aa21.63■■□□□ 1.05
HMGA1-205ENST00000447654 U3KPZ7 1027 aaPredicted RBP21.63■■□□□ 1.05
HMGA1-205ENST00000447654 COL15A1P39059 1388 aa21.62■■□□□ 1.05
HMGA1-205ENST00000447654 CTDNEP1O95476 244 aa21.62■■□□□ 1.05
HMGA1-205ENST00000447654 CHGBP05060 677 aa21.62■■□□□ 1.05
HMGA1-205ENST00000447654 CLNS1AP54105 237 aaKnown RBP21.62■■□□□ 1.05
HMGA1-205ENST00000447654 SKIDA1Q1XH10 827 aa21.62■■□□□ 1.05
HMGA1-205ENST00000447654 ETAA1Q9NY74 926 aa21.62■■□□□ 1.05
HMGA1-205ENST00000447654 DACH1Q9UI36 760 aa21.62■■□□□ 1.05
HMGA1-205ENST00000447654 HOOK1Q9UJC3 728 aaKnown RBP21.62■■□□□ 1.05
HMGA1-205ENST00000447654 TJP1Q07157 1748 aa21.62■■□□□ 1.05
HMGA1-205ENST00000447654 GOLGA6L7A0A1B0GV03 622 aa21.61■■□□□ 1.05
HMGA1-205ENST00000447654 TAF5LO75529 589 aa21.61■■□□□ 1.05
HMGA1-205ENST00000447654 ZNF483Q8TF39 744 aaPredicted RBP21.61■■□□□ 1.05
HMGA1-205ENST00000447654 AGXT2Q9BYV1 514 aa21.61■■□□□ 1.05
HMGA1-205ENST00000447654 IFFO1Q0D2I5 559 aa21.61■■□□□ 1.05
HMGA1-205ENST00000447654 TNNI3KQ59H18 835 aa21.61■■□□□ 1.05
HMGA1-205ENST00000447654 NBPF5PQ86XG9 351 aaPredicted RBP21.61■■□□□ 1.05
HMGA1-205ENST00000447654 TMOD3Q9NYL9 352 aa21.61■■□□□ 1.05
HMGA1-205ENST00000447654 HPSEQ9Y251 543 aa21.61■■□□□ 1.05
HMGA1-205ENST00000447654 FPGT-TNNI3KV9GXZ4 949 aa21.61■■□□□ 1.05
HMGA1-205ENST00000447654 RFX7Q2KHR2 1363 aa21.61■■□□□ 1.05
HMGA1-205ENST00000447654 A0A0D9SFI3 127 aa21.6■■□□□ 1.05
HMGA1-205ENST00000447654 RWDD2BP57060 319 aa21.6■■□□□ 1.05
HMGA1-205ENST00000447654 CKAP4Q07065 602 aaKnown RBP21.6■■□□□ 1.05
HMGA1-205ENST00000447654 NR1I3Q14994 352 aa21.6■■□□□ 1.05
HMGA1-205ENST00000447654 EMC10Q5UCC4 262 aa21.6■■□□□ 1.05
HMGA1-205ENST00000447654 RAD9BQ6WBX8 426 aa21.6■■□□□ 1.05
HMGA1-205ENST00000447654 KIAA1328Q86T90 577 aa21.6■■□□□ 1.05
HMGA1-205ENST00000447654 ENOX1Q8TC92 643 aaKnown RBP21.6■■□□□ 1.05
HMGA1-205ENST00000447654 SOWAHDA6NJG2 315 aa21.6■■□□□ 1.05
HMGA1-205ENST00000447654 SYKP43405 635 aa21.6■■□□□ 1.05
HMGA1-205ENST00000447654 AKAP17AQ02040 695 aaKnown RBP21.6■■□□□ 1.05
HMGA1-205ENST00000447654 NUTM2AQ8IVF1 878 aaPredicted RBP21.6■■□□□ 1.05
HMGA1-205ENST00000447654 SELENOOQ9BVL4 669 aa21.6■■□□□ 1.05
HMGA1-205ENST00000447654 SH3BP1Q9Y3L3 701 aa21.6■■□□□ 1.05
HMGA1-205ENST00000447654 TAF6LQ9Y6J9 622 aa21.6■■□□□ 1.05
HMGA1-205ENST00000447654 DNAJC10Q8IXB1 793 aa21.59■■□□□ 1.05
HMGA1-205ENST00000447654 SLC24A3Q9HC58 644 aa21.59■■□□□ 1.05
HMGA1-205ENST00000447654 HOMER3Q9NSC5 361 aa21.59■■□□□ 1.05
HMGA1-205ENST00000447654 CWC25Q9NXE8 425 aaPredicted RBP21.59■■□□□ 1.05
HMGA1-205ENST00000447654 FAM184BQ9ULE4 1060 aa21.59■■□□□ 1.05
HMGA1-205ENST00000447654 CARMIL3Q8ND23 1372 aa21.59■■□□□ 1.05
HMGA1-205ENST00000447654 CLSTN1O94985 981 aa21.58■■□□□ 1.05
HMGA1-205ENST00000447654 NAP1L1P55209 391 aaKnown RBP21.58■■□□□ 1.05
HMGA1-205ENST00000447654 MTF1Q14872 753 aa21.58■■□□□ 1.05
HMGA1-205ENST00000447654 CCNI2Q6ZMN8 369 aaPredicted RBP21.58■■□□□ 1.05
HMGA1-205ENST00000447654 TRAPPC11Q7Z392 1133 aa21.58■■□□□ 1.05
HMGA1-205ENST00000447654 PPFIBP1Q86W92 1011 aa21.58■■□□□ 1.05
HMGA1-205ENST00000447654 DBNDD2Q9BQY9 259 aa21.58■■□□□ 1.05
HMGA1-205ENST00000447654 KAT6BQ8WYB5 2073 aa21.58■■□□□ 1.05
HMGA1-205ENST00000447654 A0A1B0GTH6 734 aa21.58■■□□□ 1.04
HMGA1-205ENST00000447654 HSPA1LP34931 641 aa21.58■■□□□ 1.04
HMGA1-205ENST00000447654 ALS2CLQ60I27 953 aa21.58■■□□□ 1.04
HMGA1-205ENST00000447654 ATG9AQ7Z3C6 839 aa21.58■■□□□ 1.04
HMGA1-205ENST00000447654 RIN2Q8WYP3 895 aaPredicted RBP21.58■■□□□ 1.04
HMGA1-205ENST00000447654 ZNF274Q96GC6 653 aaPredicted RBP21.58■■□□□ 1.04
HMGA1-205ENST00000447654 DDX20Q9UHI6 824 aaKnown RBP21.58■■□□□ 1.04
HMGA1-205ENST00000447654 ZNF330Q9Y3S2 320 aaPredicted RBP21.58■■□□□ 1.04
HMGA1-205ENST00000447654 CLIC4Q9Y696 253 aa21.58■■□□□ 1.04
HMGA1-205ENST00000447654 MAP3K15Q6ZN16 1313 aa21.58■■□□□ 1.04
HMGA1-205ENST00000447654 TTC19Q6DKK2 380 aaPredicted RBP21.57■■□□□ 1.04
HMGA1-205ENST00000447654 TMED8Q6PL24 325 aaPredicted RBP21.57■■□□□ 1.04
HMGA1-205ENST00000447654 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.57■■□□□ 1.042e-6■■■■□ 19.9
HMGA1-205ENST00000447654 TMTC1Q8IUR5 882 aa21.57■■□□□ 1.04
HMGA1-205ENST00000447654 SLC40A1Q9NP59 571 aa21.57■■□□□ 1.04
HMGA1-205ENST00000447654 SEMA3FQ13275 785 aa21.57■■□□□ 1.04
HMGA1-205ENST00000447654 MYSM1Q5VVJ2 828 aa21.57■■□□□ 1.04
HMGA1-205ENST00000447654 DHX32Q7L7V1 743 aaKnown RBP21.57■■□□□ 1.04
HMGA1-205ENST00000447654 CNGA4Q8IV77 575 aa21.57■■□□□ 1.04
HMGA1-205ENST00000447654 PARP9Q8IXQ6 854 aa21.57■■□□□ 1.04
HMGA1-205ENST00000447654 MLKLQ8NB16 471 aa21.57■■□□□ 1.04
HMGA1-205ENST00000447654 HOOK2Q96ED9 719 aa21.57■■□□□ 1.04
HMGA1-205ENST00000447654 ZNF594Q96JF6 807 aaPredicted RBP21.57■■□□□ 1.04
HMGA1-205ENST00000447654 SLC4A9Q96Q91 983 aa21.57■■□□□ 1.04
HMGA1-205ENST00000447654 SAMM50Q9Y512 469 aa21.57■■□□□ 1.04
HMGA1-205ENST00000447654 TRAF1Q13077 416 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms