RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 NHSL1Q5SYE7 1610 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 SYNRGQ9UMZ2 1314 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 A0A087X0B3 334 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 SOWAHDA6NJG2 315 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 PPARAQ07869 468 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 MTF1Q14872 753 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 KARSQ15046 597 aaKnown RBP21.71■■□□□ 1.07
SDCBP-204ENST00000447182 PPFIBP1Q86W92 1011 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 IGSF22Q8N9C0 903 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 NUP133Q8WUM0 1156 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 SHISA4Q96DD7 197 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 PAGE5Q96GU1 130 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 PHF20Q9BVI0 1012 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 CD44P16070 742 aaKnown RBP21.7■■□□□ 1.06
SDCBP-204ENST00000447182 FECHP22830 423 aa21.7■■□□□ 1.06
SDCBP-204ENST00000447182 RBL2Q08999 1139 aa21.7■■□□□ 1.06
SDCBP-204ENST00000447182 TUBB2AQ13885 445 aa21.7■■□□□ 1.06
SDCBP-204ENST00000447182 TUBB2BQ9BVA1 445 aa21.7■■□□□ 1.06
SDCBP-204ENST00000447182 XIRP1Q702N8 1843 aaKnown RBP21.7■■□□□ 1.06
SDCBP-204ENST00000447182 BCL9O00512 1426 aa21.7■■□□□ 1.06
SDCBP-204ENST00000447182 CCDC151A5D8V7 595 aa21.7■■□□□ 1.06
SDCBP-204ENST00000447182 ERICH4A6NGS2 130 aa21.7■■□□□ 1.06
SDCBP-204ENST00000447182 ATP2B1P20020 1258 aa21.7■■□□□ 1.06
SDCBP-204ENST00000447182 IL6STP40189 918 aaPredicted RBP21.7■■□□□ 1.06
SDCBP-204ENST00000447182 DPYDQ12882 1025 aa21.7■■□□□ 1.06
SDCBP-204ENST00000447182 PKN1Q16512 942 aa21.7■■□□□ 1.06
SDCBP-204ENST00000447182 RAD9BQ6WBX8 426 aa21.7■■□□□ 1.06
SDCBP-204ENST00000447182 RASGRP2Q7LDG7 609 aa21.7■■□□□ 1.06
SDCBP-204ENST00000447182 BCL9LQ86UU0 1499 aa21.69■■□□□ 1.06
SDCBP-204ENST00000447182 ITIH6Q6UXX5 1313 aa21.69■■□□□ 1.06
SDCBP-204ENST00000447182 SLIT2O94813 1529 aa21.69■■□□□ 1.06
SDCBP-204ENST00000447182 MFAP3LO75121 409 aa21.69■■□□□ 1.06
SDCBP-204ENST00000447182 KRT2P35908 639 aa21.69■■□□□ 1.06
SDCBP-204ENST00000447182 AKAP17AQ02040 695 aaKnown RBP21.69■■□□□ 1.06
SDCBP-204ENST00000447182 DZIP3Q86Y13 1208 aaKnown RBP21.69■■□□□ 1.06
SDCBP-204ENST00000447182 ESR2Q92731 530 aa21.69■■□□□ 1.06
SDCBP-204ENST00000447182 CCDC51Q96ER9 411 aa21.69■■□□□ 1.06
SDCBP-204ENST00000447182 EPSTI1Q96J88 318 aa21.69■■□□□ 1.06
SDCBP-204ENST00000447182 FUT8Q9BYC5 575 aa21.69■■□□□ 1.06
SDCBP-204ENST00000447182 FUT2Q10981 343 aa21.68■■□□□ 1.06
SDCBP-204ENST00000447182 SMC1AQ14683 1233 aaKnown RBP21.68■■□□□ 1.06
SDCBP-204ENST00000447182 BRD3Q15059 726 aa21.68■■□□□ 1.06
SDCBP-204ENST00000447182 SRGAP1Q7Z6B7 1085 aa21.68■■□□□ 1.06
SDCBP-204ENST00000447182 COL22A1Q8NFW1 1626 aaPredicted RBP21.68■■□□□ 1.06
SDCBP-204ENST00000447182 TNKSO95271 1327 aa21.68■■□□□ 1.06
SDCBP-204ENST00000447182 PPP1R3GB7ZBB8 358 aa21.68■■□□□ 1.06
SDCBP-204ENST00000447182 SNAP23O00161 211 aa21.68■■□□□ 1.06
SDCBP-204ENST00000447182 PRPF3O43395 683 aaKnown RBP21.68■■□□□ 1.06
SDCBP-204ENST00000447182 TUBB4BP68371 445 aa21.68■■□□□ 1.06
SDCBP-204ENST00000447182 FILIP1LQ4L180 1135 aa21.68■■□□□ 1.06
SDCBP-204ENST00000447182 CNGA4Q8IV77 575 aa21.68■■□□□ 1.06
SDCBP-204ENST00000447182 SYMPKQ92797 1274 aaKnown RBP21.68■■□□□ 1.06
SDCBP-204ENST00000447182 KIF5CO60282 957 aa21.67■■□□□ 1.06
SDCBP-204ENST00000447182 AFMP43652 599 aa21.67■■□□□ 1.06
SDCBP-204ENST00000447182 IRX2Q9BZI1 471 aaPredicted RBP21.67■■□□□ 1.06
SDCBP-204ENST00000447182 VPS54Q9P1Q0 977 aa21.67■■□□□ 1.06
SDCBP-204ENST00000447182 CDC23Q9UJX2 597 aa21.67■■□□□ 1.06
SDCBP-204ENST00000447182 FAM205CA6NFA0 338 aa21.67■■□□□ 1.06
SDCBP-204ENST00000447182 OAS2P29728 719 aaKnown RBP21.67■■□□□ 1.06
SDCBP-204ENST00000447182 BCAMP50895 628 aa21.67■■□□□ 1.06
SDCBP-204ENST00000447182 CHMP4BP1P59074 171 aa21.67■■□□□ 1.06
SDCBP-204ENST00000447182 CEP112Q8N8E3 955 aa21.67■■□□□ 1.06
SDCBP-204ENST00000447182 HNRNPLLQ8WVV9 542 aaKnown RBP21.67■■□□□ 1.06
SDCBP-204ENST00000447182 POLR3GO15318 223 aaPredicted RBP21.66■■□□□ 1.06
SDCBP-204ENST00000447182 EARS2Q5JPH6 523 aaKnown RBP21.66■■□□□ 1.06
SDCBP-204ENST00000447182 KLHL10Q6JEL2 608 aa21.66■■□□□ 1.06
SDCBP-204ENST00000447182 MIGA1Q8NAN2 632 aa21.66■■□□□ 1.06
SDCBP-204ENST00000447182 LZTFL1Q9NQ48 299 aa21.66■■□□□ 1.06
SDCBP-204ENST00000447182 LRP2BPQ9P2M1 347 aa21.66■■□□□ 1.06
SDCBP-204ENST00000447182 LRRC10BA6NIK2 292 aa21.65■■□□□ 1.06
SDCBP-204ENST00000447182 POTEB2H3BUK9 544 aa21.65■■□□□ 1.06
SDCBP-204ENST00000447182 STX17P56962 302 aa21.65■■□□□ 1.06
SDCBP-204ENST00000447182 RBM28Q9NW13 759 aaKnown RBP21.65■■□□□ 1.06
SDCBP-204ENST00000447182 TTF2Q9UNY4 1162 aaKnown RBP21.65■■□□□ 1.06
SDCBP-204ENST00000447182 MYH2Q9UKX2 1941 aa21.65■■□□□ 1.06
SDCBP-204ENST00000447182 MAP2K7O14733 419 aa21.65■■□□□ 1.06
SDCBP-204ENST00000447182 LONRF2Q1L5Z9 754 aa21.65■■□□□ 1.06
SDCBP-204ENST00000447182 ENAHQ8N8S7 591 aaPredicted RBP21.65■■□□□ 1.06
SDCBP-204ENST00000447182 TNFRSF25Q93038 417 aa21.65■■□□□ 1.06
SDCBP-204ENST00000447182 GYPCP04921 128 aa21.64■■□□□ 1.06
SDCBP-204ENST00000447182 CASP14P31944 242 aa21.64■■□□□ 1.06
SDCBP-204ENST00000447182 TXLNBQ8N3L3 684 aa21.64■■□□□ 1.06
SDCBP-204ENST00000447182 ZSCAN10Q96SZ4 725 aaPredicted RBP21.64■■□□□ 1.06
SDCBP-204ENST00000447182 BRMS1Q9HCU9 246 aa21.64■■□□□ 1.06
SDCBP-204ENST00000447182 RAB21Q9UL25 225 aa21.64■■□□□ 1.06
SDCBP-204ENST00000447182 CYP7A1P22680 504 aa21.64■■□□□ 1.05
SDCBP-204ENST00000447182 USP5P45974 858 aa21.64■■□□□ 1.05
SDCBP-204ENST00000447182 SUSD4Q5VX71 490 aa21.64■■□□□ 1.05
SDCBP-204ENST00000447182 MSANTD4Q8NCY6 345 aa21.64■■□□□ 1.05
SDCBP-204ENST00000447182 LIMA1Q9UHB6 759 aaKnown RBP21.64■■□□□ 1.05
SDCBP-204ENST00000447182 DUOX1Q9NRD9 1551 aa21.63■■□□□ 1.05
SDCBP-204ENST00000447182 DLEC1Q9Y238 1755 aa21.63■■□□□ 1.05
SDCBP-204ENST00000447182 ATP2C1P98194 919 aaPredicted RBP21.63■■□□□ 1.05
SDCBP-204ENST00000447182 MSL3Q8N5Y2 521 aaKnown RBP21.63■■□□□ 1.05
SDCBP-204ENST00000447182 CPLX3Q8WVH0 158 aa21.63■■□□□ 1.05
SDCBP-204ENST00000447182 MINDY4BA8MYZ0 360 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 CALM1P0DP23 149 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 CALM2P0DP24 149 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 CALM3P0DP25 149 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 CASP1P29466 404 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms