RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 WDR78Q5VTH9 848 aa29.74■■■□□ 2.35
PMS1-214ENST00000446877 MFSD14CQ5VZR4 134 aa29.74■■■□□ 2.35
PMS1-214ENST00000446877 MIGA1Q8NAN2 632 aa29.74■■■□□ 2.35
PMS1-214ENST00000446877 C12orf42Q96LP6 360 aa29.74■■■□□ 2.35
PMS1-214ENST00000446877 RAB3GAP1Q15042 981 aa29.73■■■□□ 2.35
PMS1-214ENST00000446877 TATDN1Q6P1N9 297 aa29.73■■■□□ 2.35
PMS1-214ENST00000446877 SERPINB13Q9UIV8 391 aa29.73■■■□□ 2.35
PMS1-214ENST00000446877 DBNLQ9UJU6 430 aaKnown RBP29.73■■■□□ 2.35
PMS1-214ENST00000446877 POTEEQ6S8J3 1075 aa29.72■■■□□ 2.35
PMS1-214ENST00000446877 Q7L0L9 218 aa29.72■■■□□ 2.35
PMS1-214ENST00000446877 TTC6Q86TZ1 520 aa29.72■■■□□ 2.35
PMS1-214ENST00000446877 CCDC8Q9H0W5 538 aaPredicted RBP29.72■■■□□ 2.35
PMS1-214ENST00000446877 ALPK3Q96L96 1907 aa29.72■■■□□ 2.35
PMS1-214ENST00000446877 LRRC26Q2I0M4 334 aa29.71■■■□□ 2.35
PMS1-214ENST00000446877 CERKLQ49MI3 558 aaPredicted RBP29.71■■■□□ 2.35
PMS1-214ENST00000446877 MAGEB6Q8N7X4 407 aa29.71■■■□□ 2.35
PMS1-214ENST00000446877 EHD4Q9H223 541 aa29.71■■■□□ 2.35
PMS1-214ENST00000446877 CABP5Q9NP86 173 aa29.71■■■□□ 2.35
PMS1-214ENST00000446877 NDUFB9Q9Y6M9 179 aa29.71■■■□□ 2.35
PMS1-214ENST00000446877 DDX60LQ5H9U9 1706 aaKnown RBP29.71■■■□□ 2.35
PMS1-214ENST00000446877 CCER2I3L3R5 266 aa29.7■■■□□ 2.35
PMS1-214ENST00000446877 ABCB5Q2M3G0 1257 aa29.7■■■□□ 2.35
PMS1-214ENST00000446877 CATSPERGQ6ZRH7 1159 aa29.7■■■□□ 2.35
PMS1-214ENST00000446877 KIAA1683Q9H0B3 1180 aa29.7■■■□□ 2.35
PMS1-214ENST00000446877 STXBP5LQ9Y2K9 1186 aa29.7■■■□□ 2.35
PMS1-214ENST00000446877 NOP58Q9Y2X3 529 aaKnown RBP29.7■■■□□ 2.35
PMS1-214ENST00000446877 IVNS1ABPQ9Y6Y0 642 aa29.7■■■□□ 2.35
PMS1-214ENST00000446877 PLXNB2O15031 1838 aa29.7■■■□□ 2.34
PMS1-214ENST00000446877 SLC15A5A6NIM6 579 aa29.69■■■□□ 2.34
PMS1-214ENST00000446877 ATP2B2Q01814 1243 aa29.69■■■□□ 2.34
PMS1-214ENST00000446877 MAP3K12Q12852 859 aa29.69■■■□□ 2.34
PMS1-214ENST00000446877 C1orf115Q9H7X2 142 aa29.69■■■□□ 2.34
PMS1-214ENST00000446877 TLR7Q9NYK1 1049 aaKnown RBP29.69■■■□□ 2.34
PMS1-214ENST00000446877 SIPA1L1O43166 1804 aa29.68■■■□□ 2.34
PMS1-214ENST00000446877 CNMDO75829 334 aa29.68■■■□□ 2.34
PMS1-214ENST00000446877 PTPREP23469 700 aa29.68■■■□□ 2.34
PMS1-214ENST00000446877 MDM2Q00987 491 aaPredicted RBP29.68■■■□□ 2.34
PMS1-214ENST00000446877 TMED8Q6PL24 325 aaPredicted RBP29.68■■■□□ 2.34
PMS1-214ENST00000446877 MSCO60682 206 aa29.67■■■□□ 2.34
PMS1-214ENST00000446877 VCAM1P19320 739 aa29.67■■■□□ 2.34
PMS1-214ENST00000446877 CNGA1P29973 690 aa29.67■■■□□ 2.34
PMS1-214ENST00000446877 FTSJ3Q8IY81 847 aaKnown RBP29.67■■■□□ 2.34
PMS1-214ENST00000446877 EAF2Q96CJ1 260 aaPredicted RBP29.67■■■□□ 2.34
PMS1-214ENST00000446877 LBHD1Q9BQE6 289 aaPredicted RBP29.67■■■□□ 2.34
PMS1-214ENST00000446877 SENP6Q9GZR1 1112 aaPredicted RBP29.67■■■□□ 2.34
PMS1-214ENST00000446877 MTMR10Q9NXD2 777 aa29.67■■■□□ 2.34
PMS1-214ENST00000446877 MAST2Q6P0Q8 1798 aa29.67■■■□□ 2.34
PMS1-214ENST00000446877 ACER1Q8TDN7 264 aa29.66■■■□□ 2.34
PMS1-214ENST00000446877 DDX20Q9UHI6 824 aaKnown RBP29.66■■■□□ 2.34
PMS1-214ENST00000446877 LBX2Q6XYB7 198 aa29.65■■■□□ 2.34
PMS1-214ENST00000446877 FLRT1Q9NZU1 646 aa29.65■■■□□ 2.34
PMS1-214ENST00000446877 HOXC6P09630 235 aa29.64■■■□□ 2.34
PMS1-214ENST00000446877 RPAP3Q9H6T3 665 aaPredicted RBP29.64■■■□□ 2.34
PMS1-214ENST00000446877 POLR3DP05423 398 aaPredicted RBP29.63■■■□□ 2.33
PMS1-214ENST00000446877 ITPRIPQ8IWB1 547 aa29.63■■■□□ 2.33
PMS1-214ENST00000446877 LPAR1Q92633 364 aa29.63■■■□□ 2.33
PMS1-214ENST00000446877 BTBD7Q9P203 1132 aa29.63■■■□□ 2.33
PMS1-214ENST00000446877 CUL9Q8IWT3 2517 aa29.62■■■□□ 2.33
PMS1-214ENST00000446877 GRB14Q14449 540 aa29.62■■■□□ 2.33
PMS1-214ENST00000446877 ANTXR1Q9H6X2 564 aa29.62■■■□□ 2.33
PMS1-214ENST00000446877 PRKAG2Q9UGJ0 569 aa29.62■■■□□ 2.33
PMS1-214ENST00000446877 CYP2C19P33261 490 aa29.61■■■□□ 2.33
PMS1-214ENST00000446877 SHMT1P34896 483 aa29.61■■■□□ 2.33
PMS1-214ENST00000446877 DPP9Q86TI2 863 aa29.61■■■□□ 2.33
PMS1-214ENST00000446877 DNAH12Q6ZR08 3092 aa29.6■■■□□ 2.33
PMS1-214ENST00000446877 SPDYE16A6NNV3 312 aaPredicted RBP29.6■■■□□ 2.33
PMS1-214ENST00000446877 DNM1LO00429 736 aa29.6■■■□□ 2.33
PMS1-214ENST00000446877 PLCD1P51178 756 aa29.6■■■□□ 2.33
PMS1-214ENST00000446877 ATN1P54259 1190 aaPredicted RBP29.6■■■□□ 2.33
PMS1-214ENST00000446877 ERC1Q8IUD2 1116 aa29.6■■■□□ 2.33
PMS1-214ENST00000446877 HOXC10Q9NYD6 342 aa29.6■■■□□ 2.33
PMS1-214ENST00000446877 MAGEB6P1A0A0J9YX57 407 aa29.59■■■□□ 2.33
PMS1-214ENST00000446877 MPHOSPH10O00566 681 aaKnown RBP29.59■■■□□ 2.33
PMS1-214ENST00000446877 AACSQ86V21 672 aa29.59■■■□□ 2.33
PMS1-214ENST00000446877 NPLOC4Q8TAT6 608 aa29.59■■■□□ 2.33
PMS1-214ENST00000446877 COG2Q14746 738 aa29.58■■■□□ 2.33
PMS1-214ENST00000446877 SEPT2Q15019 361 aa29.58■■■□□ 2.33
PMS1-214ENST00000446877 ARRDC4Q8NCT1 418 aa29.58■■■□□ 2.33
PMS1-214ENST00000446877 CRNKL1Q9BZJ0 848 aaKnown RBP29.58■■■□□ 2.33
PMS1-214ENST00000446877 FOCADQ5VW36 1801 aa29.57■■■□□ 2.32
PMS1-214ENST00000446877 STRNO43815 780 aa29.57■■■□□ 2.32
PMS1-214ENST00000446877 TTF1Q15361 905 aaPredicted RBP29.57■■■□□ 2.32
PMS1-214ENST00000446877 RIOK1Q9BRS2 568 aaKnown RBP29.57■■■□□ 2.32
PMS1-214ENST00000446877 MCM9Q9NXL9 1143 aa29.57■■■□□ 2.32
PMS1-214ENST00000446877 GUCY1A2P33402 732 aa29.56■■■□□ 2.32
PMS1-214ENST00000446877 MOV10L1Q9BXT6 1211 aaKnown RBP29.56■■■□□ 2.32
PMS1-214ENST00000446877 TANGO6Q9C0B7 1094 aa29.56■■■□□ 2.32
PMS1-214ENST00000446877 CDK5RAP2Q96SN8 1893 aa29.55■■■□□ 2.32
PMS1-214ENST00000446877 ADORA2AP29274 412 aa29.55■■■□□ 2.32
PMS1-214ENST00000446877 SLC9C2Q5TAH2 1124 aa29.55■■■□□ 2.32
PMS1-214ENST00000446877 FAM109BQ6ICB4 259 aaPredicted RBP29.55■■■□□ 2.32
PMS1-214ENST00000446877 TRPV1Q8NER1 839 aa29.55■■■□□ 2.32
PMS1-214ENST00000446877 SLC5A4Q9NY91 659 aa29.55■■■□□ 2.32
PMS1-214ENST00000446877 EXOC6BQ9Y2D4 811 aa29.55■■■□□ 2.32
PMS1-214ENST00000446877 RTP1P59025 263 aa29.54■■■□□ 2.32
PMS1-214ENST00000446877 GJC2Q5T442 439 aaPredicted RBP29.54■■■□□ 2.32
PMS1-214ENST00000446877 OLFML2BQ68BL8 750 aa29.54■■■□□ 2.32
PMS1-214ENST00000446877 SPATC1LQ9H0A9 340 aa29.54■■■□□ 2.32
PMS1-214ENST00000446877 LAMA2P24043 3122 aaKnown RBP29.53■■■□□ 2.32
PMS1-214ENST00000446877 KBTBD13C9JR72 458 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms