RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 ZNF287Q9HBT7 754 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 CABP5Q9NP86 173 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 DAGLAQ9Y4D2 1042 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 CDK8P49336 464 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 FUT2Q10981 343 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 RBM43Q6ZSC3 357 aaKnown RBP10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 DGKHQ86XP1 1220 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 KLHL34Q8N239 644 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 JMYQ8N9B5 988 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 PNMA1Q8ND90 353 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 FAM200AQ8TCP9 573 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 FAM163AQ96GL9 167 aaPredicted RBP10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 CLIC6Q96NY7 704 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 EYA3Q99504 573 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 KCNQ5Q9NR82 932 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 STK32BQ9NY57 414 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 CCDC88AQ3V6T2 1871 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 A0A087WWV3 80 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 RRP9O43818 475 aaKnown RBP10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 KIF5BP33176 963 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 TOB1P50616 345 aaPredicted RBP10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 PTPAQ15257 358 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 AXDND1Q5T1B0 1012 aaPredicted RBP10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 MAST2Q6P0Q8 1798 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 PPP6R2O75170 966 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 ZNF202O95125 648 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 PFKFB1P16118 471 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 RASA1P20936 1047 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 CMA1P23946 247 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 KRT2P35908 639 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 ZNF165P49910 485 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 HSP90AA2PQ14568 343 aaPredicted RBP10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 SHISA4Q96DD7 197 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 CBX8Q9HC52 389 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 USP40Q9NVE5 1235 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 MYH2Q9UKX2 1941 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 GAKO14976 1311 aa10.97□□□□□ -0.65
COL6A4P1-201ENST00000446690 GOLGB1Q14789 3259 aaKnown RBP10.96□□□□□ -0.65
COL6A4P1-201ENST00000446690 RILPL1Q5EBL4 403 aa10.96□□□□□ -0.65
COL6A4P1-201ENST00000446690 SPECC1Q5M775 1068 aa10.96□□□□□ -0.65
COL6A4P1-201ENST00000446690 STAG2Q8N3U4 1231 aa10.96□□□□□ -0.65
COL6A4P1-201ENST00000446690 PCDHB6Q9Y5E3 794 aa10.96□□□□□ -0.65
COL6A4P1-201ENST00000446690 NLRP5P59047 1200 aa10.96□□□□□ -0.66
COL6A4P1-201ENST00000446690 ZRSR1Q15695 479 aaKnown RBP10.96□□□□□ -0.66
COL6A4P1-201ENST00000446690 CCDC178Q5BJE1 867 aa10.96□□□□□ -0.66
COL6A4P1-201ENST00000446690 SHC4Q6S5L8 630 aa10.96□□□□□ -0.66
COL6A4P1-201ENST00000446690 C16orf86Q6ZW13 317 aa10.96□□□□□ -0.66
COL6A4P1-201ENST00000446690 CAMKK2Q96RR4 588 aa10.96□□□□□ -0.66
COL6A4P1-201ENST00000446690 TMEM47Q9BQJ4 181 aa10.96□□□□□ -0.66
COL6A4P1-201ENST00000446690 PHF20Q9BVI0 1012 aa10.96□□□□□ -0.66
COL6A4P1-201ENST00000446690 BRMS1Q9HCU9 246 aa10.96□□□□□ -0.66
COL6A4P1-201ENST00000446690 CNTNAP5Q8WYK1 1306 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 ROBO3Q96MS0 1386 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 FAM205CA6NFA0 338 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 AP5Z1O43299 807 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 GOLGA8HP0CJ92 632 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 VEGFAP15692 232 aaPredicted RBP10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 MSNP26038 577 aaKnown RBP10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 SYKP43405 635 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 RBM5P52756 815 aaKnown RBP eCLIP10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 STYK1Q6J9G0 422 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 KIAA0825Q8IV33 1275 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 KRI1Q8N9T8 703 aaKnown RBP10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 PDGFDQ9GZP0 370 aaPredicted RBP10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 CCDC39Q9UFE4 941 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 SUGT1Q9Y2Z0 365 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 ANKRD31Q8N7Z5 1873 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 SCG2P13521 617 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 STX1AQ16623 288 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 EARS2Q5JPH6 523 aaKnown RBP10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 PODNQ7Z5L7 613 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 ZSCAN30Q86W11 494 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 TEKT1Q969V4 418 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 TCP11L1Q9NUJ3 509 aa10.95□□□□□ -0.66
COL6A4P1-201ENST00000446690 MYH15Q9Y2K3 1946 aa10.94□□□□□ -0.66
COL6A4P1-201ENST00000446690 CUTAO60888 179 aa10.94□□□□□ -0.66
COL6A4P1-201ENST00000446690 C11orf57Q6ZUT1 292 aaPredicted RBP10.94□□□□□ -0.66
COL6A4P1-201ENST00000446690 ANKS1AQ92625 1134 aa10.94□□□□□ -0.66
COL6A4P1-201ENST00000446690 CNKSR1Q969H4 720 aa10.94□□□□□ -0.66
COL6A4P1-201ENST00000446690 DDX4Q9NQI0 724 aaKnown RBP10.94□□□□□ -0.66
COL6A4P1-201ENST00000446690 MAD2L2Q9UI95 211 aa10.94□□□□□ -0.66
COL6A4P1-201ENST00000446690 KIAA1551Q9HCM1 1747 aa10.94□□□□□ -0.66
COL6A4P1-201ENST00000446690 BIN1O00499 593 aa10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 GRIN1Q05586 938 aa10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 SF3B2Q13435 895 aaKnown RBP10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 AOC3Q16853 763 aa10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 PFKFB3Q16875 520 aaPredicted RBP10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 HS1BP3Q53T59 392 aa10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 NOM1Q5C9Z4 860 aaKnown RBP10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 ISM2Q6H9L7 571 aa10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 CDC42EP5Q6NZY7 148 aa10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 RASGRP2Q7LDG7 609 aa10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 GPKOWQ92917 476 aaPredicted RBP eCLIP10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 CEP95Q96GE4 821 aa10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 KIAA1468Q9P260 1216 aa10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 CEP131Q9UPN4 1083 aa10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 GOLGA6L19H0YKK7 550 aa10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 ECE2O60344 883 aa10.93□□□□□ -0.66
COL6A4P1-201ENST00000446690 CRKP46108 304 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms