RNA–Protein interactions for RNA: ENST00000445770.3

LINC01949-201, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 1 (best) BASIC

Gene LINC01949, Length 2,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-201ENST00000445770 CNTNAP4Q9C0A0 1308 aa11.31□□□□□ -0.6
LINC01949-201ENST00000445770 VWA3AA6NCI4 1184 aa11.3□□□□□ -0.6
LINC01949-201ENST00000445770 RIMBP2O15034 1052 aa11.3□□□□□ -0.6
LINC01949-201ENST00000445770 TNNT1P13805 278 aa11.3□□□□□ -0.6
LINC01949-201ENST00000445770 TFAP4Q01664 338 aa11.3□□□□□ -0.6
LINC01949-201ENST00000445770 TRAPPC3LQ5T215 181 aa11.3□□□□□ -0.6
LINC01949-201ENST00000445770 ARMCX5Q6P1M9 558 aa11.3□□□□□ -0.6
LINC01949-201ENST00000445770 KRBA2Q6ZNG9 492 aa11.3□□□□□ -0.6
LINC01949-201ENST00000445770 UIMC1Q96RL1 719 aa11.3□□□□□ -0.6
LINC01949-201ENST00000445770 TNRC6CQ9HCJ0 1690 aaKnown RBP11.3□□□□□ -0.6
LINC01949-201ENST00000445770 MCM7P33993 719 aa11.3□□□□□ -0.6
LINC01949-201ENST00000445770 EIF6P56537 245 aaKnown RBP11.3□□□□□ -0.6
LINC01949-201ENST00000445770 CCZ1BP86790 482 aa11.3□□□□□ -0.6
LINC01949-201ENST00000445770 CCZ1P86791 482 aaPredicted RBP11.3□□□□□ -0.6
LINC01949-201ENST00000445770 TYW1BQ6NUM6 668 aa11.3□□□□□ -0.6
LINC01949-201ENST00000445770 EEF2KMTQ96G04 330 aa11.3□□□□□ -0.6
LINC01949-201ENST00000445770 NAT10Q9H0A0 1025 aaKnown RBP11.3□□□□□ -0.6
LINC01949-201ENST00000445770 BLZF1Q9H2G9 400 aa11.3□□□□□ -0.6
LINC01949-201ENST00000445770 IL17RBQ9NRM6 502 aa11.3□□□□□ -0.6
LINC01949-201ENST00000445770 UFL1O94874 794 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 TRIM37O94972 964 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 COL5A3P25940 1745 aaPredicted RBP11.29□□□□□ -0.6
LINC01949-201ENST00000445770 GPSM2P81274 684 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 CFAP100Q494V2 611 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 PRR5LQ6MZQ0 368 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 CREBRFQ8IUR6 639 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 MYRIPQ8NFW9 859 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 CRNKL1Q9BZJ0 848 aaKnown RBP11.29□□□□□ -0.6
LINC01949-201ENST00000445770 MAPK8IP1Q9UQF2 711 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 BCORQ6W2J9 1755 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 SERPINC1P01008 464 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 FANCCQ00597 558 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 NPY5RQ15761 445 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 RCSD1Q6JBY9 416 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 HOMER1Q86YM7 354 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 MED15Q96RN5 788 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 NYXQ9GZU5 481 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 CASZ1Q86V15 1759 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 FAM205AQ6ZU69 1335 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 PP2D1A8MPX8 630 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 PPP6R2O75170 966 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 LDHBP07195 334 aaKnown RBP11.29□□□□□ -0.6
LINC01949-201ENST00000445770 SLC35G1Q2M3R5 365 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 SARM1Q6SZW1 724 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 SEPT12Q8IYM1 358 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 FAM177A1Q8N128 213 aaPredicted RBP11.29□□□□□ -0.6
LINC01949-201ENST00000445770 JMYQ8N9B5 988 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 SYMPKQ92797 1274 aaKnown RBP11.29□□□□□ -0.6
LINC01949-201ENST00000445770 MRFAP1L1Q96HT8 127 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 ZNF219Q9P2Y4 722 aaPredicted RBP11.29□□□□□ -0.6
LINC01949-201ENST00000445770 MAN1B1Q9UKM7 699 aa11.29□□□□□ -0.6
LINC01949-201ENST00000445770 BTAF1O14981 1849 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 PICALMQ13492 652 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 POSTNQ15063 836 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 SLC10A5Q5PT55 438 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 TMTC3Q6ZXV5 915 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 BRIP1Q9BX63 1249 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 VAT1LQ9HCJ6 419 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 SAMSN1Q9NSI8 373 aaKnown RBP11.28□□□□□ -0.6
LINC01949-201ENST00000445770 DUOX1Q9NRD9 1551 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 LAMB2P55268 1798 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 AFF2P51816 1311 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 CNTNAP5Q8WYK1 1306 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 STK36Q9NRP7 1315 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 CCDC196A0A1B0GTZ2 297 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 CUTAO60888 179 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 PTPREP23469 700 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 MKNK2Q9HBH9 465 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 INTS13Q9NVM9 706 aa11.28□□□□□ -0.6
LINC01949-201ENST00000445770 KRT2P35908 639 aa11.27□□□□□ -0.61
LINC01949-201ENST00000445770 UBASH3AP57075 661 aa11.27□□□□□ -0.61
LINC01949-201ENST00000445770 NLRP5P59047 1200 aa11.27□□□□□ -0.61
LINC01949-201ENST00000445770 PTGDRQ13258 359 aa11.27□□□□□ -0.61
LINC01949-201ENST00000445770 CTCFLQ8NI51 663 aaPredicted RBP11.27□□□□□ -0.61
LINC01949-201ENST00000445770 RPGRQ92834 1020 aaKnown RBP11.27□□□□□ -0.61
LINC01949-201ENST00000445770 GJD4Q96KN9 370 aaPredicted RBP11.27□□□□□ -0.61
LINC01949-201ENST00000445770 PHF20Q9BVI0 1012 aa11.27□□□□□ -0.61
LINC01949-201ENST00000445770 FOXP1Q9H334 677 aaPredicted RBP11.27□□□□□ -0.61
LINC01949-201ENST00000445770 ANAPC4Q9UJX5 808 aa11.27□□□□□ -0.61
LINC01949-201ENST00000445770 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC01949-201ENST00000445770 TIAM2Q8IVF5 1701 aa11.27□□□□□ -0.61
LINC01949-201ENST00000445770 TRIM75PA6NK02 468 aa11.27□□□□□ -0.61
LINC01949-201ENST00000445770 C6orf229H3BNL8 230 aa11.27□□□□□ -0.61
LINC01949-201ENST00000445770 RILPL1Q5EBL4 403 aa11.27□□□□□ -0.61
LINC01949-201ENST00000445770 MSL1Q68DK7 614 aa11.27□□□□□ -0.61
LINC01949-201ENST00000445770 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.27□□□□□ -0.61
LINC01949-201ENST00000445770 FNBP4Q8N3X1 1017 aaPredicted RBP11.27□□□□□ -0.61
LINC01949-201ENST00000445770 LRRN4CLQ8ND94 238 aa11.27□□□□□ -0.61
LINC01949-201ENST00000445770 WASF1Q92558 559 aa11.27□□□□□ -0.61
LINC01949-201ENST00000445770 ZBTB9Q96C00 473 aa11.27□□□□□ -0.61
LINC01949-201ENST00000445770 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.27□□□□□ -0.61
LINC01949-201ENST00000445770 CD44P16070 742 aaKnown RBP11.26□□□□□ -0.61
LINC01949-201ENST00000445770 HSPA1LP34931 641 aa11.26□□□□□ -0.61
LINC01949-201ENST00000445770 MDM2Q00987 491 aaPredicted RBP11.26□□□□□ -0.61
LINC01949-201ENST00000445770 MYL5Q02045 173 aa11.26□□□□□ -0.61
LINC01949-201ENST00000445770 IL17AQ16552 155 aa11.26□□□□□ -0.61
LINC01949-201ENST00000445770 HEATR3Q7Z4Q2 680 aa11.26□□□□□ -0.61
LINC01949-201ENST00000445770 RNF26Q9BY78 433 aaPredicted RBP11.26□□□□□ -0.61
LINC01949-201ENST00000445770 POLLQ9UGP5 575 aa11.26□□□□□ -0.61
LINC01949-201ENST00000445770 TUBE1Q9UJT0 475 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms