RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 STK32BQ9NY57 414 aa20.67■□□□□ 0.9
SHANK3-203ENST00000445220 PARP2Q9UGN5 583 aa20.67■□□□□ 0.9
SHANK3-203ENST00000445220 ODF2LQ9ULJ1 636 aa20.67■□□□□ 0.9
SHANK3-203ENST00000445220 ZWINTO95229 277 aa20.67■□□□□ 0.9
SHANK3-203ENST00000445220 PDE1CQ14123 709 aaPredicted RBP20.67■□□□□ 0.9
SHANK3-203ENST00000445220 BEND3Q5T5X7 828 aa20.67■□□□□ 0.9
SHANK3-203ENST00000445220 MAPK8IP1Q9UQF2 711 aa20.67■□□□□ 0.9
SHANK3-203ENST00000445220 GUCY2FP51841 1108 aa20.66■□□□□ 0.9
SHANK3-203ENST00000445220 IRX4P78413 519 aa20.66■□□□□ 0.9
SHANK3-203ENST00000445220 LONRF2Q1L5Z9 754 aa20.66■□□□□ 0.9
SHANK3-203ENST00000445220 ADALQ6DHV7 355 aa20.66■□□□□ 0.9
SHANK3-203ENST00000445220 CCDC84Q86UT8 332 aaPredicted RBP20.66■□□□□ 0.9
SHANK3-203ENST00000445220 EPB41P11171 864 aaKnown RBP20.66■□□□□ 0.9
SHANK3-203ENST00000445220 TMEM87BQ96K49 555 aa20.66■□□□□ 0.9
SHANK3-203ENST00000445220 TCHPQ9BT92 498 aa20.66■□□□□ 0.9
SHANK3-203ENST00000445220 SRGAP1Q7Z6B7 1085 aa20.66■□□□□ 0.9
SHANK3-203ENST00000445220 NCOA5Q9HCD5 579 aaKnown RBP20.66■□□□□ 0.9
SHANK3-203ENST00000445220 LARSQ9P2J5 1176 aaKnown RBP20.66■□□□□ 0.9
SHANK3-203ENST00000445220 HYOU1Q9Y4L1 999 aa20.66■□□□□ 0.9
SHANK3-203ENST00000445220 OR8K1Q8NGG5 319 aa20.66■□□□□ 0.9
SHANK3-203ENST00000445220 SLC4A8Q2Y0W8 1093 aa20.65■□□□□ 0.9
SHANK3-203ENST00000445220 RRP36Q96EU6 259 aaKnown RBP20.65■□□□□ 0.9
SHANK3-203ENST00000445220 TPX2Q9ULW0 747 aaKnown RBP20.65■□□□□ 0.9
SHANK3-203ENST00000445220 KIAA0232Q92628 1395 aa20.65■□□□□ 0.9
SHANK3-203ENST00000445220 PARP10Q53GL7 1025 aa20.65■□□□□ 0.9
SHANK3-203ENST00000445220 RASIP1Q5U651 963 aa20.65■□□□□ 0.9
SHANK3-203ENST00000445220 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.65■□□□□ 0.9
SHANK3-203ENST00000445220 MPHOSPH6Q99547 160 aaKnown RBP20.65■□□□□ 0.9
SHANK3-203ENST00000445220 NUCKS1Q9H1E3 243 aaKnown RBP20.65■□□□□ 0.9
SHANK3-203ENST00000445220 HAUS4Q9H6D7 363 aa20.65■□□□□ 0.9
SHANK3-203ENST00000445220 MAGEB6Q8N7X4 407 aa20.65■□□□□ 0.9
SHANK3-203ENST00000445220 MSANTD4Q8NCY6 345 aa20.65■□□□□ 0.9
SHANK3-203ENST00000445220 NR1I2O75469 434 aa20.65■□□□□ 0.9
SHANK3-203ENST00000445220 DIS3L2Q8IYB7 885 aaKnown RBP20.65■□□□□ 0.9
SHANK3-203ENST00000445220 TRMT44Q8IYL2 757 aaKnown RBP20.65■□□□□ 0.9
SHANK3-203ENST00000445220 PPP1R13BQ96KQ4 1090 aa20.65■□□□□ 0.9
SHANK3-203ENST00000445220 CDC23Q9UJX2 597 aa20.65■□□□□ 0.9
SHANK3-203ENST00000445220 I3L4J1 428 aa20.64■□□□□ 0.9
SHANK3-203ENST00000445220 SEC31AO94979 1220 aaKnown RBP20.64■□□□□ 0.9
SHANK3-203ENST00000445220 TROVE2P10155 538 aaKnown RBP eCLIP20.64■□□□□ 0.9
SHANK3-203ENST00000445220 RTCBQ9Y3I0 505 aaKnown RBP20.64■□□□□ 0.9
SHANK3-203ENST00000445220 SMIM24O75264 130 aa20.64■□□□□ 0.89
SHANK3-203ENST00000445220 KRT15P19012 456 aa20.64■□□□□ 0.89
SHANK3-203ENST00000445220 TDRD7Q8NHU6 1098 aaKnown RBP20.64■□□□□ 0.89
SHANK3-203ENST00000445220 ARHGEF10O15013 1369 aa20.64■□□□□ 0.89
SHANK3-203ENST00000445220 FRMD3A2A2Y4 597 aa20.64■□□□□ 0.89
SHANK3-203ENST00000445220 TNNI2P48788 182 aa20.64■□□□□ 0.89
SHANK3-203ENST00000445220 PEX26Q7Z412 305 aa20.64■□□□□ 0.89
SHANK3-203ENST00000445220 MRRFQ96E11 262 aaKnown RBP20.64■□□□□ 0.89
SHANK3-203ENST00000445220 OTUD7BQ6GQQ9 843 aa20.64■□□□□ 0.89
SHANK3-203ENST00000445220 BCAP29Q9UHQ4 241 aa20.64■□□□□ 0.89
SHANK3-203ENST00000445220 FLOT1O75955 427 aa20.63■□□□□ 0.89
SHANK3-203ENST00000445220 TCP1P17987 556 aaKnown RBP20.63■□□□□ 0.89
SHANK3-203ENST00000445220 TERF2Q15554 542 aa20.63■□□□□ 0.89
SHANK3-203ENST00000445220 TNNI3KQ59H18 835 aa20.63■□□□□ 0.89
SHANK3-203ENST00000445220 MAP3K21Q5TCX8 1036 aa20.63■□□□□ 0.89
SHANK3-203ENST00000445220 FPGT-TNNI3KV9GXZ4 949 aa20.63■□□□□ 0.89
SHANK3-203ENST00000445220 STX10O60499 249 aa20.63■□□□□ 0.89
SHANK3-203ENST00000445220 HNRNPH2P55795 449 aaKnown RBP20.63■□□□□ 0.89
SHANK3-203ENST00000445220 QTRT2Q9H974 415 aaKnown RBP20.63■□□□□ 0.89
SHANK3-203ENST00000445220 PLEKHG3A1L390 1219 aa20.63■□□□□ 0.89
SHANK3-203ENST00000445220 KLHL30Q0D2K2 578 aa20.63■□□□□ 0.89
SHANK3-203ENST00000445220 TRPC3Q13507 836 aa20.63■□□□□ 0.89
SHANK3-203ENST00000445220 ANKRD42Q8N9B4 389 aa20.63■□□□□ 0.89
SHANK3-203ENST00000445220 NELFBQ8WX92 580 aa20.63■□□□□ 0.89
SHANK3-203ENST00000445220 DENND2AQ9ULE3 1009 aa20.63■□□□□ 0.89
SHANK3-203ENST00000445220 FRMD4BQ9Y2L6 1034 aa20.63■□□□□ 0.89
SHANK3-203ENST00000445220 FAN1Q9Y2M0 1017 aa20.63■□□□□ 0.89
SHANK3-203ENST00000445220 WDR78Q5VTH9 848 aa20.62■□□□□ 0.89
SHANK3-203ENST00000445220 KIFAP3Q92845 792 aa20.62■□□□□ 0.89
SHANK3-203ENST00000445220 PKP1Q13835 747 aa20.62■□□□□ 0.89
SHANK3-203ENST00000445220 MGARPQ8TDB4 240 aa20.62■□□□□ 0.89
SHANK3-203ENST00000445220 MCM9Q9NXL9 1143 aa20.62■□□□□ 0.89
SHANK3-203ENST00000445220 OPHN1O60890 802 aa20.62■□□□□ 0.89
SHANK3-203ENST00000445220 PPP2R5AQ15172 486 aa20.62■□□□□ 0.89
SHANK3-203ENST00000445220 MCTP2Q6DN12 878 aa20.62■□□□□ 0.89
SHANK3-203ENST00000445220 CCDC105Q8IYK2 499 aa20.62■□□□□ 0.89
SHANK3-203ENST00000445220 ANGEL1Q9UNK9 670 aaKnown RBP20.62■□□□□ 0.89
SHANK3-203ENST00000445220 ARHGEF5Q12774 1597 aa20.62■□□□□ 0.89
SHANK3-203ENST00000445220 JAK2O60674 1132 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 RPSAP08865 295 aaKnown RBP20.61■□□□□ 0.89
SHANK3-203ENST00000445220 ICE2Q659A1 982 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 MTMR6Q9Y217 621 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 GCC2Q8IWJ2 1684 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 IFT88Q13099 833 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 PPP2R5EQ16537 467 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 DDX27Q96GQ7 796 aaKnown RBP20.61■□□□□ 0.89
SHANK3-203ENST00000445220 ZC3H12CQ9C0D7 883 aaKnown RBP20.61■□□□□ 0.89
SHANK3-203ENST00000445220 PHLPP2Q6ZVD8 1323 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 CCDC151A5D8V7 595 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 TTLL12Q14166 644 aaPredicted RBP20.61■□□□□ 0.89
SHANK3-203ENST00000445220 SFMBT2Q5VUG0 894 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 OGFOD1Q8N543 542 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 SSH2Q76I76 1423 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 PFDN1O60925 122 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 PNOCQ13519 176 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 PSMD6Q15008 389 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 E2F4Q16254 413 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 TFCP2L1Q9NZI6 479 aa20.61■□□□□ 0.89
SHANK3-203ENST00000445220 LDHBP07195 334 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms