RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 FAM205AQ6ZU69 1335 aa15.75■□□□□ 0.11
RBM39-216ENST00000444878 CUTAO60888 179 aa15.75■□□□□ 0.11
RBM39-216ENST00000444878 MMP10P09238 476 aa15.75■□□□□ 0.11
RBM39-216ENST00000444878 ALDH1B1P30837 517 aa15.75■□□□□ 0.11
RBM39-216ENST00000444878 SYKP43405 635 aa15.75■□□□□ 0.11
RBM39-216ENST00000444878 TOB1P50616 345 aaPredicted RBP15.75■□□□□ 0.11
RBM39-216ENST00000444878 ZRSR1Q15695 479 aaKnown RBP15.75■□□□□ 0.11
RBM39-216ENST00000444878 DGKHQ86XP1 1220 aa15.75■□□□□ 0.11
RBM39-216ENST00000444878 ZNF444Q8N0Y2 327 aaPredicted RBP15.75■□□□□ 0.11
RBM39-216ENST00000444878 ERCC4Q92889 916 aaPredicted RBP15.75■□□□□ 0.11
RBM39-216ENST00000444878 FAM163AQ96GL9 167 aaPredicted RBP15.75■□□□□ 0.11
RBM39-216ENST00000444878 SAP30BPQ9UHR5 308 aaKnown RBP15.75■□□□□ 0.11
RBM39-216ENST00000444878 PARP3Q9Y6F1 533 aa15.75■□□□□ 0.11
RBM39-216ENST00000444878 CNTNAP5Q8WYK1 1306 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 GOLGA6L19H0YKK7 550 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 TSPY3P0CV98 308 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 TSPY8P0CW00 308 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 KIF5BP33176 963 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 PDE6BP35913 854 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 PLCD1P51178 756 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 GTF2IP78347 998 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 CCDC178Q5BJE1 867 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 SHC4Q6S5L8 630 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 C11orf57Q6ZUT1 292 aaPredicted RBP15.74■□□□□ 0.11
RBM39-216ENST00000444878 MPNDQ8N594 471 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 SRBD1Q8N5C6 995 aaKnown RBP15.74■□□□□ 0.11
RBM39-216ENST00000444878 OXER1Q8TDS5 423 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 ZC3H12CQ9C0D7 883 aaKnown RBP15.74■□□□□ 0.11
RBM39-216ENST00000444878 COA1Q9GZY4 146 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 ZNF287Q9HBT7 754 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 KIAA1468Q9P260 1216 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 KRT2P35908 639 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 KRI1Q8N9T8 703 aaKnown RBP15.74■□□□□ 0.11
RBM39-216ENST00000444878 CLIC6Q96NY7 704 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 PHF20Q9BVI0 1012 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 TMX4Q9H1E5 349 aaPredicted RBP15.74■□□□□ 0.11
RBM39-216ENST00000444878 BRMS1Q9HCU9 246 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 CABP5Q9NP86 173 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 IL17RBQ9NRM6 502 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 HPSEQ9Y251 543 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 FOCADQ5VW36 1801 aa15.74■□□□□ 0.11
RBM39-216ENST00000444878 RESP18Q5W5W9 173 aa15.73■□□□□ 0.11
RBM39-216ENST00000444878 TIGD1Q96MW7 591 aa15.73■□□□□ 0.11
RBM39-216ENST00000444878 CEP131Q9UPN4 1083 aa15.73■□□□□ 0.11
RBM39-216ENST00000444878 GAKO14976 1311 aa15.73■□□□□ 0.11
RBM39-216ENST00000444878 BECN2A8MW95 431 aa15.73■□□□□ 0.11
RBM39-216ENST00000444878 ATP2B1P20020 1258 aa15.73■□□□□ 0.11
RBM39-216ENST00000444878 IQCB1Q15051 598 aa15.73■□□□□ 0.11
RBM39-216ENST00000444878 CEP57L1Q8IYX8 460 aa15.73■□□□□ 0.11
RBM39-216ENST00000444878 SLC44A5Q8NCS7 719 aa15.73■□□□□ 0.11
RBM39-216ENST00000444878 PNMA1Q8ND90 353 aa15.73■□□□□ 0.11
RBM39-216ENST00000444878 FBXW7Q969H0 707 aa15.73■□□□□ 0.11
RBM39-216ENST00000444878 SHISA4Q96DD7 197 aa15.73■□□□□ 0.11
RBM39-216ENST00000444878 NAT10Q9H0A0 1025 aaKnown RBP15.73■□□□□ 0.11
RBM39-216ENST00000444878 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.73■□□□□ 0.11
RBM39-216ENST00000444878 COL11A2P13942 1736 aaPredicted RBP15.73■□□□□ 0.11
RBM39-216ENST00000444878 FLT1P17948 1338 aa15.72■□□□□ 0.11
RBM39-216ENST00000444878 DDX60LQ5H9U9 1706 aaKnown RBP15.72■□□□□ 0.11
RBM39-216ENST00000444878 A0A087WWV3 80 aa15.72■□□□□ 0.11
RBM39-216ENST00000444878 FAM237AA0A1B0GTK4 181 aa15.72■□□□□ 0.11
RBM39-216ENST00000444878 USP17L3A6NCW0 530 aa15.72■□□□□ 0.11
RBM39-216ENST00000444878 USP17L4A6NCW7 530 aa15.72■□□□□ 0.11
RBM39-216ENST00000444878 ZNF500O60304 480 aaPredicted RBP15.72■□□□□ 0.11
RBM39-216ENST00000444878 RXRBP28702 533 aa15.72■□□□□ 0.11
RBM39-216ENST00000444878 RHBDL3P58872 404 aa15.72■□□□□ 0.11
RBM39-216ENST00000444878 OLFM4Q6UX06 510 aa15.72■□□□□ 0.11
RBM39-216ENST00000444878 DPP8Q6V1X1 898 aaPredicted RBP15.72■□□□□ 0.11
RBM39-216ENST00000444878 USP17L1Q7RTZ2 530 aa15.72■□□□□ 0.11
RBM39-216ENST00000444878 ANKS1AQ92625 1134 aa15.72■□□□□ 0.11
RBM39-216ENST00000444878 MASTLQ96GX5 879 aa15.72■□□□□ 0.11
RBM39-216ENST00000444878 TRIM5Q9C035 493 aa15.72■□□□□ 0.11
RBM39-216ENST00000444878 TCP11L1Q9NUJ3 509 aa15.72■□□□□ 0.11
RBM39-216ENST00000444878 PCDHB6Q9Y5E3 794 aa15.72■□□□□ 0.11
RBM39-216ENST00000444878 MYH8P13535 1937 aa15.72■□□□□ 0.11
RBM39-216ENST00000444878 GOLGA6L6A8MZA4 724 aa15.71■□□□□ 0.11
RBM39-216ENST00000444878 SPC24Q8NBT2 197 aa15.71■□□□□ 0.11
RBM39-216ENST00000444878 SCG2P13521 617 aa15.71■□□□□ 0.11
RBM39-216ENST00000444878 RASA1P20936 1047 aa15.71■□□□□ 0.11
RBM39-216ENST00000444878 MSL1Q68DK7 614 aa15.71■□□□□ 0.11
RBM39-216ENST00000444878 PKNOX2Q96KN3 472 aa15.71■□□□□ 0.11
RBM39-216ENST00000444878 STX8Q9UNK0 236 aa15.71■□□□□ 0.11
RBM39-216ENST00000444878 SUGT1Q9Y2Z0 365 aa15.71■□□□□ 0.11
RBM39-216ENST00000444878 G3V3G9 751 aa15.7■□□□□ 0.1
RBM39-216ENST00000444878 PTPREP23469 700 aa15.7■□□□□ 0.1
RBM39-216ENST00000444878 CDK8P49336 464 aa15.7■□□□□ 0.1
RBM39-216ENST00000444878 PFKFB3Q16875 520 aaPredicted RBP15.7■□□□□ 0.1
RBM39-216ENST00000444878 DCAF8Q5TAQ9 597 aa15.7■□□□□ 0.1
RBM39-216ENST00000444878 C16orf86Q6ZW13 317 aa15.7■□□□□ 0.1
RBM39-216ENST00000444878 PIBF1Q8WXW3 757 aa15.7■□□□□ 0.1
RBM39-216ENST00000444878 ZNF830Q96NB3 372 aaPredicted RBP15.7■□□□□ 0.1
RBM39-216ENST00000444878 KCNH3Q9ULD8 1083 aa15.7■□□□□ 0.1
RBM39-216ENST00000444878 DAGLAQ9Y4D2 1042 aa15.7■□□□□ 0.1
RBM39-216ENST00000444878 TRIM75PA6NK02 468 aa15.7■□□□□ 0.1
RBM39-216ENST00000444878 F8W031 263 aaPredicted RBP15.7■□□□□ 0.1
RBM39-216ENST00000444878 KIAA2012Q0VF49 1180 aa15.7■□□□□ 0.1
RBM39-216ENST00000444878 ZNF622Q969S3 477 aaKnown RBP eCLIP15.7■□□□□ 0.17e-10■■□□□ 11.9
RBM39-216ENST00000444878 EYA3Q99504 573 aa15.7■□□□□ 0.1
RBM39-216ENST00000444878 FAM13BQ9NYF5 915 aa15.7■□□□□ 0.1
RBM39-216ENST00000444878 FBXO2Q9UK22 296 aaPredicted RBP15.7■□□□□ 0.1
RBM39-216ENST00000444878 TNS1Q9HBL0 1735 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms