RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 AS3MTQ9HBK9 375 aa12.9□□□□□ -0.34
HDAC8-215ENST00000444609 CNMDO75829 334 aa12.89□□□□□ -0.35
HDAC8-215ENST00000444609 RGS20O76081 388 aa12.89□□□□□ -0.35
HDAC8-215ENST00000444609 FGBP02675 491 aa12.89□□□□□ -0.35
HDAC8-215ENST00000444609 CAP2P40123 477 aa12.89□□□□□ -0.35
HDAC8-215ENST00000444609 CCNA1P78396 465 aa12.89□□□□□ -0.35
HDAC8-215ENST00000444609 WDR66Q8TBY9 1149 aa12.89□□□□□ -0.35
HDAC8-215ENST00000444609 CHMP4AQ9BY43 222 aa12.89□□□□□ -0.35
HDAC8-215ENST00000444609 PUS3Q9BZE2 481 aaKnown RBP12.89□□□□□ -0.35
HDAC8-215ENST00000444609 IL23AQ9NPF7 189 aa12.89□□□□□ -0.35
HDAC8-215ENST00000444609 RABGAP1Q9Y3P9 1069 aa12.89□□□□□ -0.35
HDAC8-215ENST00000444609 C5orf42Q9H799 3197 aa12.89□□□□□ -0.35
HDAC8-215ENST00000444609 DOCK1Q14185 1865 aa12.89□□□□□ -0.35
HDAC8-215ENST00000444609 ZNF318Q5VUA4 2279 aa12.88□□□□□ -0.35
HDAC8-215ENST00000444609 SPTBN4Q9H254 2564 aa12.88□□□□□ -0.35
HDAC8-215ENST00000444609 CACNA1BQ00975 2339 aa12.88□□□□□ -0.35
HDAC8-215ENST00000444609 EPOPA6NHQ4 379 aa12.88□□□□□ -0.35
HDAC8-215ENST00000444609 FAM196BA6NMK8 535 aa12.88□□□□□ -0.35
HDAC8-215ENST00000444609 ZNF853P0CG23 659 aa12.88□□□□□ -0.35
HDAC8-215ENST00000444609 RRP1BQ14684 758 aaKnown RBP12.88□□□□□ -0.35
HDAC8-215ENST00000444609 EPHA10Q5JZY3 1008 aa12.88□□□□□ -0.35
HDAC8-215ENST00000444609 PRAMEF19Q5SWL8 479 aa12.88□□□□□ -0.35
HDAC8-215ENST00000444609 IER5LQ5T953 404 aa12.88□□□□□ -0.35
HDAC8-215ENST00000444609 WDR78Q5VTH9 848 aa12.88□□□□□ -0.35
HDAC8-215ENST00000444609 RNF180Q86T96 592 aa12.88□□□□□ -0.35
HDAC8-215ENST00000444609 XPNPEP3Q9NQH7 507 aa12.88□□□□□ -0.35
HDAC8-215ENST00000444609 RFX7Q2KHR2 1363 aa12.88□□□□□ -0.35
HDAC8-215ENST00000444609 GAKO14976 1311 aa12.88□□□□□ -0.35
HDAC8-215ENST00000444609 C19orf81C9J6K1 198 aa12.87□□□□□ -0.35
HDAC8-215ENST00000444609 TCF15Q12870 199 aa12.87□□□□□ -0.35
HDAC8-215ENST00000444609 LEXMQ3ZCV2 418 aa12.87□□□□□ -0.35
HDAC8-215ENST00000444609 SAMD1Q6SPF0 538 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-215ENST00000444609 C8orf58Q8NAV2 365 aa12.87□□□□□ -0.35
HDAC8-215ENST00000444609 LINS1Q8NG48 757 aa12.87□□□□□ -0.35
HDAC8-215ENST00000444609 PRRX2Q99811 253 aa12.87□□□□□ -0.35
HDAC8-215ENST00000444609 CERS4Q9HA82 394 aa12.87□□□□□ -0.35
HDAC8-215ENST00000444609 DDX4Q9NQI0 724 aaKnown RBP12.87□□□□□ -0.35
HDAC8-215ENST00000444609 IVNS1ABPQ9Y6Y0 642 aa12.87□□□□□ -0.35
HDAC8-215ENST00000444609 ZFHX2Q9C0A1 2572 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-215ENST00000444609 MROH5Q6ZUA9 1318 aa12.87□□□□□ -0.35
HDAC8-215ENST00000444609 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.86□□□□□ -0.35
HDAC8-215ENST00000444609 APBB1O00213 710 aa12.86□□□□□ -0.35
HDAC8-215ENST00000444609 PRDX5P30044 214 aa12.86□□□□□ -0.35
HDAC8-215ENST00000444609 ZEB1P37275 1124 aaPredicted RBP12.86□□□□□ -0.35
HDAC8-215ENST00000444609 OTOP2Q7RTS6 562 aa12.86□□□□□ -0.35
HDAC8-215ENST00000444609 DPP9Q86TI2 863 aa12.86□□□□□ -0.35
HDAC8-215ENST00000444609 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.86□□□□□ -0.35
HDAC8-215ENST00000444609 STARD7Q9NQZ5 370 aa12.86□□□□□ -0.35
HDAC8-215ENST00000444609 PGK1P00558 417 aa12.85□□□□□ -0.35
HDAC8-215ENST00000444609 RARBP10826 455 aa12.85□□□□□ -0.35
HDAC8-215ENST00000444609 IL9P15248 144 aa12.85□□□□□ -0.35
HDAC8-215ENST00000444609 PICALMQ13492 652 aa12.85□□□□□ -0.35
HDAC8-215ENST00000444609 G2E3Q7L622 706 aa12.85□□□□□ -0.35
HDAC8-215ENST00000444609 SLC4A7Q9Y6M7 1214 aa12.85□□□□□ -0.35
HDAC8-215ENST00000444609 ZFHX4Q86UP3 3567 aa12.85□□□□□ -0.35
HDAC8-215ENST00000444609 TRANK1O15050 2925 aa12.84□□□□□ -0.35
HDAC8-215ENST00000444609 LDHBP07195 334 aaKnown RBP12.84□□□□□ -0.35
HDAC8-215ENST00000444609 CA3P07451 260 aa12.84□□□□□ -0.35
HDAC8-215ENST00000444609 ID4P47928 161 aa12.84□□□□□ -0.35
HDAC8-215ENST00000444609 CDK7P50613 346 aa12.84□□□□□ -0.35
HDAC8-215ENST00000444609 ACLYP53396 1101 aa12.84□□□□□ -0.35
HDAC8-215ENST00000444609 GRB10Q13322 594 aa12.84□□□□□ -0.35
HDAC8-215ENST00000444609 TMEM67Q5HYA8 995 aa12.84□□□□□ -0.35
HDAC8-215ENST00000444609 NUP133Q8WUM0 1156 aa12.84□□□□□ -0.35
HDAC8-215ENST00000444609 TSEN34Q9BSV6 310 aaKnown RBP12.84□□□□□ -0.35
HDAC8-215ENST00000444609 PPP1R12CQ9BZL4 782 aa12.84□□□□□ -0.35
HDAC8-215ENST00000444609 UBE2ZQ9H832 354 aaPredicted RBP12.84□□□□□ -0.35
HDAC8-215ENST00000444609 PTPRZ1P23471 2315 aaPredicted RBP12.84□□□□□ -0.35
HDAC8-215ENST00000444609 DOCK2Q92608 1830 aa12.83□□□□□ -0.35
HDAC8-215ENST00000444609 DCHS1Q96JQ0 3298 aa12.83□□□□□ -0.36
HDAC8-215ENST00000444609 GRXCR2A6NFK2 248 aa12.83□□□□□ -0.36
HDAC8-215ENST00000444609 USP17L10C9JJH3 530 aa12.83□□□□□ -0.36
HDAC8-215ENST00000444609 PDE8BO95263 885 aa12.83□□□□□ -0.36
HDAC8-215ENST00000444609 ADORA2AP29274 412 aa12.83□□□□□ -0.36
HDAC8-215ENST00000444609 VGLL2Q8N8G2 317 aa12.83□□□□□ -0.36
HDAC8-215ENST00000444609 ARNTL2Q8WYA1 636 aa12.83□□□□□ -0.36
HDAC8-215ENST00000444609 EMILIN3Q9NT22 766 aa12.83□□□□□ -0.36
HDAC8-215ENST00000444609 MROH7Q68CQ1 1323 aa12.83□□□□□ -0.36
HDAC8-215ENST00000444609 KIF16BQ96L93 1317 aa12.83□□□□□ -0.36
HDAC8-215ENST00000444609 LPXNO60711 386 aa12.82□□□□□ -0.36
HDAC8-215ENST00000444609 COBLO75128 1261 aa12.82□□□□□ -0.36
HDAC8-215ENST00000444609 ATP2A2P16615 1042 aaKnown RBP12.82□□□□□ -0.36
HDAC8-215ENST00000444609 CYP2C18P33260 490 aa12.82□□□□□ -0.36
HDAC8-215ENST00000444609 PTCRAQ6ISU1 281 aaPredicted RBP12.82□□□□□ -0.36
HDAC8-215ENST00000444609 BMP8AQ7Z5Y6 402 aa12.82□□□□□ -0.36
HDAC8-215ENST00000444609 DNAAF4Q8WXU2 420 aa12.82□□□□□ -0.36
HDAC8-215ENST00000444609 FAM86C1Q9NVL1 165 aa12.82□□□□□ -0.36
HDAC8-215ENST00000444609 BTBD7Q9P203 1132 aa12.82□□□□□ -0.36
HDAC8-215ENST00000444609 MOXD2PA6NHM9 499 aa12.81□□□□□ -0.36
HDAC8-215ENST00000444609 STRNO43815 780 aa12.81□□□□□ -0.36
HDAC8-215ENST00000444609 ADAMTS4O75173 837 aa12.81□□□□□ -0.36
HDAC8-215ENST00000444609 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
HDAC8-215ENST00000444609 KCNA5P22460 613 aa12.81□□□□□ -0.36
HDAC8-215ENST00000444609 JAG1P78504 1218 aa12.81□□□□□ -0.36
HDAC8-215ENST00000444609 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
HDAC8-215ENST00000444609 METTL24Q5JXM2 366 aa12.81□□□□□ -0.36
HDAC8-215ENST00000444609 STK31Q9BXU1 1019 aa12.81□□□□□ -0.36
HDAC8-215ENST00000444609 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
HDAC8-215ENST00000444609 LMCD1Q9NZU5 365 aa12.81□□□□□ -0.36
HDAC8-215ENST00000444609 NRBP1Q9UHY1 535 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms