RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 NUDT12Q9BQG2 462 aa28.58■■■□□ 2.17
TMEM238-201ENST00000444469 KIAA1683Q9H0B3 1180 aa28.58■■■□□ 2.17
TMEM238-201ENST00000444469 ARMT1Q9H993 441 aa28.58■■■□□ 2.17
TMEM238-201ENST00000444469 TCRBV5S4A2TA0A5A2 114 aa28.57■■■□□ 2.16
TMEM238-201ENST00000444469 SHMT1P34896 483 aa28.57■■■□□ 2.16
TMEM238-201ENST00000444469 HABP4Q5JVS0 413 aaKnown RBP28.57■■■□□ 2.16
TMEM238-201ENST00000444469 HAUS7Q99871 368 aa28.57■■■□□ 2.16
TMEM238-201ENST00000444469 MBD4O95243 580 aa28.56■■■□□ 2.16
TMEM238-201ENST00000444469 ADD2P35612 726 aa28.56■■■□□ 2.16
TMEM238-201ENST00000444469 ERVK-9P63128 1117 aa28.56■■■□□ 2.16
TMEM238-201ENST00000444469 ERVK-24P63145 666 aa28.56■■■□□ 2.16
TMEM238-201ENST00000444469 CCNA1P78396 465 aa28.56■■■□□ 2.16
TMEM238-201ENST00000444469 GPATCH3Q96I76 525 aa28.56■■■□□ 2.16
TMEM238-201ENST00000444469 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.56■■■□□ 2.16
TMEM238-201ENST00000444469 TXNRD2Q9NNW7 524 aa28.56■■■□□ 2.16
TMEM238-201ENST00000444469 DCP1AQ9NPI6 582 aaPredicted RBP28.56■■■□□ 2.16
TMEM238-201ENST00000444469 SWAP70Q9UH65 585 aa28.56■■■□□ 2.16
TMEM238-201ENST00000444469 CYP2B6P20813 491 aa28.55■■■□□ 2.16
TMEM238-201ENST00000444469 HMX1Q9NP08 348 aaPredicted RBP28.55■■■□□ 2.16
TMEM238-201ENST00000444469 ATP8A2Q9NTI2 1148 aa28.55■■■□□ 2.16
TMEM238-201ENST00000444469 RBPJLQ9UBG7 517 aa28.55■■■□□ 2.16
TMEM238-201ENST00000444469 GJD2Q9UKL4 321 aa28.55■■■□□ 2.16
TMEM238-201ENST00000444469 H0YGN5 161 aa28.54■■■□□ 2.16
TMEM238-201ENST00000444469 GLRX3O76003 335 aaKnown RBP28.54■■■□□ 2.16
TMEM238-201ENST00000444469 TRMT44Q8IYL2 757 aaKnown RBP28.54■■■□□ 2.16
TMEM238-201ENST00000444469 PAK6Q9NQU5 681 aaPredicted RBP28.54■■■□□ 2.16
TMEM238-201ENST00000444469 RABGAP1Q9Y3P9 1069 aa28.54■■■□□ 2.16
TMEM238-201ENST00000444469 NR2E3Q9Y5X4 410 aa28.54■■■□□ 2.16
TMEM238-201ENST00000444469 VCAM1P19320 739 aa28.53■■■□□ 2.16
TMEM238-201ENST00000444469 GABPAQ06546 454 aa28.53■■■□□ 2.16
TMEM238-201ENST00000444469 SEPT2Q15019 361 aa28.53■■■□□ 2.16
TMEM238-201ENST00000444469 WDR78Q5VTH9 848 aa28.53■■■□□ 2.16
TMEM238-201ENST00000444469 ACER1Q8TDN7 264 aa28.53■■■□□ 2.16
TMEM238-201ENST00000444469 DDX60LQ5H9U9 1706 aaKnown RBP28.52■■■□□ 2.16
TMEM238-201ENST00000444469 RPTORQ8N122 1335 aa28.52■■■□□ 2.16
TMEM238-201ENST00000444469 SMARCA5O60264 1052 aaPredicted RBP28.52■■■□□ 2.16
TMEM238-201ENST00000444469 PLEKHH3Q7Z736 793 aa28.52■■■□□ 2.16
TMEM238-201ENST00000444469 PEX10O60683 326 aa28.51■■■□□ 2.15
TMEM238-201ENST00000444469 ZKSCAN1P17029 563 aaPredicted RBP28.51■■■□□ 2.15
TMEM238-201ENST00000444469 RGS2P41220 211 aa28.51■■■□□ 2.15
TMEM238-201ENST00000444469 UBE3CQ15386 1083 aa28.51■■■□□ 2.15
TMEM238-201ENST00000444469 CATSPERGQ6ZRH7 1159 aa28.51■■■□□ 2.15
TMEM238-201ENST00000444469 TMEM179Q6ZVK1 233 aa28.51■■■□□ 2.15
TMEM238-201ENST00000444469 GPR142Q7Z601 462 aa28.51■■■□□ 2.15
TMEM238-201ENST00000444469 RPAP3Q9H6T3 665 aaPredicted RBP28.51■■■□□ 2.15
TMEM238-201ENST00000444469 ECHDC1Q9NTX5 307 aa28.51■■■□□ 2.15
TMEM238-201ENST00000444469 BRCA2P51587 3418 aa28.51■■■□□ 2.15
TMEM238-201ENST00000444469 CYP2D6P10635 497 aa28.5■■■□□ 2.15
TMEM238-201ENST00000444469 XRCC5P13010 732 aaKnown RBP28.5■■■□□ 2.15
TMEM238-201ENST00000444469 Q3C1V9 767 aa28.5■■■□□ 2.15
TMEM238-201ENST00000444469 UBE2Q1Q7Z7E8 422 aa28.5■■■□□ 2.15
TMEM238-201ENST00000444469 SH2D4AQ9H788 454 aa28.5■■■□□ 2.15
TMEM238-201ENST00000444469 PRKAB2O43741 272 aa28.49■■■□□ 2.15
TMEM238-201ENST00000444469 TRIB2Q92519 343 aa28.49■■■□□ 2.15
TMEM238-201ENST00000444469 PORCNQ9H237 461 aa28.49■■■□□ 2.15
TMEM238-201ENST00000444469 ARHGEF10LQ9HCE6 1279 aa28.49■■■□□ 2.15
TMEM238-201ENST00000444469 SLC4A4Q9Y6R1 1079 aa28.49■■■□□ 2.15
TMEM238-201ENST00000444469 IVNS1ABPQ9Y6Y0 642 aa28.49■■■□□ 2.15
TMEM238-201ENST00000444469 MKI67P46013 3256 aaKnown RBP28.48■■■□□ 2.15
TMEM238-201ENST00000444469 TANGO6Q9C0B7 1094 aa28.48■■■□□ 2.15
TMEM238-201ENST00000444469 CRISPLD2Q9H0B8 497 aa28.48■■■□□ 2.15
TMEM238-201ENST00000444469 PCDH10Q9P2E7 1040 aa28.48■■■□□ 2.15
TMEM238-201ENST00000444469 COLQQ9Y215 455 aaPredicted RBP28.48■■■□□ 2.15
TMEM238-201ENST00000444469 DOCK3Q8IZD9 2030 aa28.48■■■□□ 2.15
TMEM238-201ENST00000444469 EVI5O60447 810 aa28.47■■■□□ 2.15
TMEM238-201ENST00000444469 GUCY1A2P33402 732 aa28.47■■■□□ 2.15
TMEM238-201ENST00000444469 SLFNL1Q499Z3 407 aa28.47■■■□□ 2.15
TMEM238-201ENST00000444469 NECAB2Q7Z6G3 386 aa28.47■■■□□ 2.15
TMEM238-201ENST00000444469 ANKLE1Q8NAG6 615 aa28.47■■■□□ 2.15
TMEM238-201ENST00000444469 SLC44A5Q8NCS7 719 aa28.47■■■□□ 2.15
TMEM238-201ENST00000444469 DYNLL2Q96FJ2 89 aa28.47■■■□□ 2.15
TMEM238-201ENST00000444469 CCDC17Q96LX7 622 aa28.47■■■□□ 2.15
TMEM238-201ENST00000444469 APBA2Q99767 749 aa28.47■■■□□ 2.15
TMEM238-201ENST00000444469 PRKAR2AP13861 404 aaKnown RBP28.46■■■□□ 2.15
TMEM238-201ENST00000444469 TRIM32Q13049 653 aa28.46■■■□□ 2.15
TMEM238-201ENST00000444469 USP17L12C9JPN9 530 aa28.45■■■□□ 2.14
TMEM238-201ENST00000444469 USP17L21D6R901 530 aa28.45■■■□□ 2.14
TMEM238-201ENST00000444469 EVX2Q03828 476 aa28.45■■■□□ 2.14
TMEM238-201ENST00000444469 ICA1Q05084 483 aa28.45■■■□□ 2.14
TMEM238-201ENST00000444469 LBX2Q6XYB7 198 aa28.45■■■□□ 2.14
TMEM238-201ENST00000444469 PAWRQ96IZ0 340 aaKnown RBP28.45■■■□□ 2.14
TMEM238-201ENST00000444469 DCTPP1Q9H773 170 aa28.45■■■□□ 2.14
TMEM238-201ENST00000444469 HOXC10Q9NYD6 342 aa28.45■■■□□ 2.14
TMEM238-201ENST00000444469 COG2Q14746 738 aa28.44■■■□□ 2.14
TMEM238-201ENST00000444469 C12orf60Q5U649 245 aa28.44■■■□□ 2.14
TMEM238-201ENST00000444469 CHRDL2Q6WN34 429 aa28.44■■■□□ 2.14
TMEM238-201ENST00000444469 SPDYE16A6NNV3 312 aaPredicted RBP28.43■■■□□ 2.14
TMEM238-201ENST00000444469 MAP2K5Q13163 448 aa28.43■■■□□ 2.14
TMEM238-201ENST00000444469 LRRFIP1Q32MZ4 808 aaKnown RBP28.43■■■□□ 2.14
TMEM238-201ENST00000444469 MORN1Q5T089 497 aa28.43■■■□□ 2.14
TMEM238-201ENST00000444469 LPAR1Q92633 364 aa28.43■■■□□ 2.14
TMEM238-201ENST00000444469 ARPP21Q9UBL0 812 aaPredicted RBP28.43■■■□□ 2.14
TMEM238-201ENST00000444469 A0A1W2PRG0 241 aa28.42■■■□□ 2.14
TMEM238-201ENST00000444469 CNMDO75829 334 aa28.42■■■□□ 2.14
TMEM238-201ENST00000444469 AKR1B1P15121 316 aa28.42■■■□□ 2.14
TMEM238-201ENST00000444469 CDK8P49336 464 aa28.42■■■□□ 2.14
TMEM238-201ENST00000444469 ATP2B2Q01814 1243 aa28.42■■■□□ 2.14
TMEM238-201ENST00000444469 PLXNB2O15031 1838 aa28.41■■■□□ 2.14
TMEM238-201ENST00000444469 CYP2D7A0A087X1C5 515 aa28.41■■■□□ 2.14
TMEM238-201ENST00000444469 SLC15A5A6NIM6 579 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms