RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 MCM9Q9NXL9 1143 aa16.87■□□□□ 0.29
TREX1-202ENST00000444177 GJD2Q9UKL4 321 aa16.87■□□□□ 0.29
TREX1-202ENST00000444177 TAOK2Q9UL54 1235 aa16.87■□□□□ 0.29
TREX1-202ENST00000444177 PEX10O60683 326 aa16.86■□□□□ 0.29
TREX1-202ENST00000444177 GLRX3O76003 335 aaKnown RBP16.86■□□□□ 0.29
TREX1-202ENST00000444177 SHMT1P34896 483 aa16.86■□□□□ 0.29
TREX1-202ENST00000444177 RAB3GAP1Q15042 981 aa16.86■□□□□ 0.29
TREX1-202ENST00000444177 KBTBD3Q8NAB2 608 aa16.86■□□□□ 0.29
TREX1-202ENST00000444177 GPRC5AQ8NFJ5 357 aa16.86■□□□□ 0.29
TREX1-202ENST00000444177 PI4K2BQ8TCG2 481 aa16.86■□□□□ 0.29
TREX1-202ENST00000444177 U2AF1L4Q8WU68 220 aaKnown RBP16.86■□□□□ 0.29
TREX1-202ENST00000444177 TXNRD2Q9NNW7 524 aa16.86■□□□□ 0.29
TREX1-202ENST00000444177 CABP5Q9NP86 173 aa16.86■□□□□ 0.29
TREX1-202ENST00000444177 RBPJLQ9UBG7 517 aa16.86■□□□□ 0.29
TREX1-202ENST00000444177 SGPL1O95470 568 aa16.85■□□□□ 0.29
TREX1-202ENST00000444177 GABPAQ06546 454 aa16.85■□□□□ 0.29
TREX1-202ENST00000444177 DCP1AQ9NPI6 582 aaPredicted RBP16.85■□□□□ 0.29
TREX1-202ENST00000444177 PRKAB2O43741 272 aa16.84■□□□□ 0.29
TREX1-202ENST00000444177 EVX2Q03828 476 aa16.84■□□□□ 0.29
TREX1-202ENST00000444177 ZYXQ15942 572 aaKnown RBP16.84■□□□□ 0.29
TREX1-202ENST00000444177 Q3C1V9 767 aa16.84■□□□□ 0.29
TREX1-202ENST00000444177 B4GALNT3Q6L9W6 998 aa16.84■□□□□ 0.29
TREX1-202ENST00000444177 POTEEQ6S8J3 1075 aa16.84■□□□□ 0.29
TREX1-202ENST00000444177 UBE2Q1Q7Z7E8 422 aa16.84■□□□□ 0.29
TREX1-202ENST00000444177 ACER1Q8TDN7 264 aa16.84■□□□□ 0.29
TREX1-202ENST00000444177 C12orf42Q96LP6 360 aa16.84■□□□□ 0.29
TREX1-202ENST00000444177 FEZ1Q99689 392 aa16.84■□□□□ 0.29
TREX1-202ENST00000444177 LNPKQ9C0E8 428 aa16.84■□□□□ 0.29
TREX1-202ENST00000444177 KIAA1683Q9H0B3 1180 aa16.84■□□□□ 0.29
TREX1-202ENST00000444177 SALL3Q9BXA9 1300 aa16.84■□□□□ 0.29
TREX1-202ENST00000444177 USP17L15C9J2P7 530 aa16.83■□□□□ 0.28
TREX1-202ENST00000444177 USP17L13C9JLJ4 530 aa16.83■□□□□ 0.28
TREX1-202ENST00000444177 USP17L11C9JVI0 530 aa16.83■□□□□ 0.28
TREX1-202ENST00000444177 USP17L18D6R9N7 530 aa16.83■□□□□ 0.28
TREX1-202ENST00000444177 USP17L22D6RA61 530 aa16.83■□□□□ 0.28
TREX1-202ENST00000444177 USP17L17D6RBQ6 530 aa16.83■□□□□ 0.28
TREX1-202ENST00000444177 USP17L19D6RCP7 530 aa16.83■□□□□ 0.28
TREX1-202ENST00000444177 USP17L20D6RJB6 530 aa16.83■□□□□ 0.28
TREX1-202ENST00000444177 CYP2D6P10635 497 aa16.83■□□□□ 0.28
TREX1-202ENST00000444177 GUCY1A2P33402 732 aa16.83■□□□□ 0.28
TREX1-202ENST00000444177 USP14P54578 494 aa16.83■□□□□ 0.28
TREX1-202ENST00000444177 USP17L24Q0WX57 530 aa16.83■□□□□ 0.28
TREX1-202ENST00000444177 GTF3C2Q8WUA4 911 aaPredicted RBP16.83■□□□□ 0.28
TREX1-202ENST00000444177 APPBP2Q92624 585 aa16.83■□□□□ 0.28
TREX1-202ENST00000444177 FSD1Q9BTV5 496 aa16.83■□□□□ 0.28
TREX1-202ENST00000444177 PUS7LQ9H0K6 701 aaKnown RBP16.83■□□□□ 0.28
TREX1-202ENST00000444177 IGHDP01880 384 aa16.82■□□□□ 0.28
TREX1-202ENST00000444177 TFRCP02786 760 aaKnown RBP16.82■□□□□ 0.28
TREX1-202ENST00000444177 ZFYP08048 801 aaPredicted RBP16.82■□□□□ 0.28
TREX1-202ENST00000444177 SEPT2Q15019 361 aa16.82■□□□□ 0.28
TREX1-202ENST00000444177 LRRFIP1Q32MZ4 808 aaKnown RBP16.82■□□□□ 0.28
TREX1-202ENST00000444177 CATSPERGQ6ZRH7 1159 aa16.82■□□□□ 0.28
TREX1-202ENST00000444177 SMC5Q8IY18 1101 aa16.82■□□□□ 0.28
TREX1-202ENST00000444177 DDRGK1Q96HY6 314 aa16.82■□□□□ 0.28
TREX1-202ENST00000444177 DEFB118Q96PH6 123 aa16.82■□□□□ 0.28
TREX1-202ENST00000444177 PAK6Q9NQU5 681 aaPredicted RBP16.82■□□□□ 0.28
TREX1-202ENST00000444177 ATP8A2Q9NTI2 1148 aa16.82■□□□□ 0.28
TREX1-202ENST00000444177 SLC4A4Q9Y6R1 1079 aa16.82■□□□□ 0.28
TREX1-202ENST00000444177 BAZ2AQ9UIF9 1905 aaKnown RBP16.81■□□□□ 0.28
TREX1-202ENST00000444177 H0YGN5 161 aa16.81■□□□□ 0.28
TREX1-202ENST00000444177 MPHOSPH10O00566 681 aaKnown RBP16.81■□□□□ 0.28
TREX1-202ENST00000444177 RNF113AO15541 343 aaKnown RBP16.81■□□□□ 0.28
TREX1-202ENST00000444177 HMGCRP04035 888 aa16.81■□□□□ 0.28
TREX1-202ENST00000444177 CAPN2P17655 700 aa16.81■□□□□ 0.28
TREX1-202ENST00000444177 MAPK4P31152 587 aa16.81■□□□□ 0.28
TREX1-202ENST00000444177 ERVK-9P63128 1117 aa16.81■□□□□ 0.28
TREX1-202ENST00000444177 ERVK-24P63145 666 aa16.81■□□□□ 0.28
TREX1-202ENST00000444177 HABP4Q5JVS0 413 aaKnown RBP16.81■□□□□ 0.28
TREX1-202ENST00000444177 AMOTL1Q8IY63 956 aa16.81■□□□□ 0.28
TREX1-202ENST00000444177 DPF3Q92784 378 aa16.81■□□□□ 0.28
TREX1-202ENST00000444177 PAGR1Q9BTK6 254 aa16.81■□□□□ 0.28
TREX1-202ENST00000444177 FARP2O94887 1054 aaPredicted RBP16.8■□□□□ 0.28
TREX1-202ENST00000444177 VCAM1P19320 739 aa16.8■□□□□ 0.28
TREX1-202ENST00000444177 CYP2B6P20813 491 aa16.8■□□□□ 0.28
TREX1-202ENST00000444177 PDE1AP54750 535 aa16.8■□□□□ 0.28
TREX1-202ENST00000444177 CCAR1Q8IX12 1150 aaKnown RBP16.8■□□□□ 0.28
TREX1-202ENST00000444177 SLC44A5Q8NCS7 719 aa16.8■□□□□ 0.28
TREX1-202ENST00000444177 OSBP2Q969R2 916 aa16.8■□□□□ 0.28
TREX1-202ENST00000444177 DYNLL2Q96FJ2 89 aa16.8■□□□□ 0.28
TREX1-202ENST00000444177 NUDT12Q9BQG2 462 aa16.8■□□□□ 0.28
TREX1-202ENST00000444177 CRISPLD2Q9H0B8 497 aa16.8■□□□□ 0.28
TREX1-202ENST00000444177 PORCNQ9H237 461 aa16.8■□□□□ 0.28
TREX1-202ENST00000444177 RABGAP1Q9Y3P9 1069 aa16.8■□□□□ 0.28
TREX1-202ENST00000444177 TRIOBPQ9H2D6 2365 aa16.8■□□□□ 0.28
TREX1-202ENST00000444177 A0A1W2PRG0 241 aa16.79■□□□□ 0.28
TREX1-202ENST00000444177 GPAA1O43292 621 aa16.79■□□□□ 0.28
TREX1-202ENST00000444177 CNMDO75829 334 aa16.79■□□□□ 0.28
TREX1-202ENST00000444177 XRCC5P13010 732 aaKnown RBP16.79■□□□□ 0.28
TREX1-202ENST00000444177 TRIM32Q13049 653 aa16.79■□□□□ 0.28
TREX1-202ENST00000444177 GPR142Q7Z601 462 aa16.79■□□□□ 0.28
TREX1-202ENST00000444177 CHD1LQ86WJ1 897 aa16.79■□□□□ 0.28
TREX1-202ENST00000444177 TRIB2Q92519 343 aa16.79■□□□□ 0.28
TREX1-202ENST00000444177 HTATIP2Q9BUP3 242 aa16.79■□□□□ 0.28
TREX1-202ENST00000444177 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.79■□□□□ 0.28
TREX1-202ENST00000444177 STAP2Q9UGK3 403 aa16.79■□□□□ 0.28
TREX1-202ENST00000444177 SWAP70Q9UH65 585 aa16.79■□□□□ 0.28
TREX1-202ENST00000444177 RPTORQ8N122 1335 aa16.78■□□□□ 0.28
TREX1-202ENST00000444177 CYP2D7A0A087X1C5 515 aa16.78■□□□□ 0.28
TREX1-202ENST00000444177 USP17L12C9JPN9 530 aa16.78■□□□□ 0.28
TREX1-202ENST00000444177 USP17L21D6R901 530 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms