RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 CCDC129Q6ZRS4 1044 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 KIAA0825Q8IV33 1275 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 CCDC94Q9BW85 323 aaPredicted RBP12.5□□□□□ -0.41
FN1-211ENST00000443816 SPOPO43791 374 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 CUTAO60888 179 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 POLR2MP0CAP2 368 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 CRKLP46109 303 aaKnown RBP12.49□□□□□ -0.41
FN1-211ENST00000443816 YARSP54577 528 aaKnown RBP12.49□□□□□ -0.41
FN1-211ENST00000443816 G2E3Q7L622 706 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 SPATA24Q86W54 205 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 ZNF804BA4D1E1 1349 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 USP19O94966 1318 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 RASA3Q14644 834 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 RSPH3Q86UC2 560 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 ZBTB16Q05516 673 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 FAM160B1Q5W0V3 765 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 ARFGAP3Q9NP61 516 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 ARAP3Q8WWN8 1544 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 WDR17Q8IZU2 1322 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 FLOT1O75955 427 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 ATP5DP30049 168 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 PSMC4P43686 418 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 STX17P56962 302 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 CFAP157Q5JU67 520 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 LEO1Q8WVC0 666 aaPredicted RBP12.49□□□□□ -0.41
FN1-211ENST00000443816 SRRTQ9BXP5 876 aaKnown RBP12.49□□□□□ -0.41
FN1-211ENST00000443816 AP5M1Q9H0R1 490 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 ABT1Q9ULW3 272 aaKnown RBP12.49□□□□□ -0.41
FN1-211ENST00000443816 BBOX1O75936 387 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 EP400NLQ6ZTU2 488 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 DSCC1Q9BVC3 393 aa12.49□□□□□ -0.41
FN1-211ENST00000443816 ZBTB7BO15156 539 aaPredicted RBP12.48□□□□□ -0.41
FN1-211ENST00000443816 SKILP12757 684 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 IL6STP40189 918 aaPredicted RBP12.48□□□□□ -0.41
FN1-211ENST00000443816 ZAP70P43403 619 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 TNNC1P63316 161 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 CALCOCO2Q13137 446 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 GEN1Q17RS7 908 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 TRIM7Q9C029 511 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 DNAJC25Q9H1X3 360 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 ERICH4A6NGS2 130 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 ANO1Q5XXA6 986 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 TPH2Q8IWU9 490 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 LTKP29376 864 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 DMP1Q13316 513 aaPredicted RBP12.48□□□□□ -0.41
FN1-211ENST00000443816 ABCB5Q2M3G0 1257 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 SRGAP1Q7Z6B7 1085 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 ZNF277Q9NRM2 450 aaPredicted RBP12.48□□□□□ -0.41
FN1-211ENST00000443816 USP14P54578 494 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 PPARAQ07869 468 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 MIER3Q7Z3K6 550 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 PRPF31Q8WWY3 499 aaKnown RBP12.48□□□□□ -0.41
FN1-211ENST00000443816 PSTPIP2Q9H939 334 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.48□□□□□ -0.414e-9■■■□□ 19.1
FN1-211ENST00000443816 STIM2Q9P246 746 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 DCUN1D2Q6PH85 259 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 AFAP1L2Q8N4X5 818 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 GOLGA5Q8TBA6 731 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.48□□□□□ -0.411e-65■□□□□ 8.5
FN1-211ENST00000443816 V9GYY5 206 aaPredicted RBP12.48□□□□□ -0.41
FN1-211ENST00000443816 SEMA3EO15041 775 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 GALNT17Q6IS24 598 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 SND1Q7KZF4 910 aaKnown RBP eCLIP12.48□□□□□ -0.412e-6■■■□□ 17.5
FN1-211ENST00000443816 MED10Q9BTT4 135 aa12.48□□□□□ -0.41
FN1-211ENST00000443816 MAP2P11137 1827 aaKnown RBP12.48□□□□□ -0.41
FN1-211ENST00000443816 AKR1B15C9JRZ8 316 aaPredicted RBP12.47□□□□□ -0.41
FN1-211ENST00000443816 TBC1D8BQ0IIM8 1120 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 HERC4Q5GLZ8 1057 aaPredicted RBP12.47□□□□□ -0.41
FN1-211ENST00000443816 EXOC8Q8IYI6 725 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 ABI1Q8IZP0 508 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 GIGYF1O75420 1035 aaPredicted RBP12.47□□□□□ -0.41
FN1-211ENST00000443816 TNNI1P19237 187 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 ADD3Q9UEY8 706 aaKnown RBP12.47□□□□□ -0.41
FN1-211ENST00000443816 ALAS1P13196 640 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 RPS6KC1Q96S38 1066 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 SMC6Q96SB8 1091 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 LRWD1Q9UFC0 647 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 SYNRGQ9UMZ2 1314 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 PCCAP05165 728 aaPredicted RBP12.47□□□□□ -0.41
FN1-211ENST00000443816 FBXO11Q86XK2 927 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 KCNH3Q9ULD8 1083 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 SMCO2A6NFE2 343 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 ATP5JP18859 108 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 SCNN1DP51172 638 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 ITIH3Q06033 890 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 ZSWIM4Q9H7M6 989 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 MAP3K4Q9Y6R4 1608 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 IREB2P48200 963 aaKnown RBP12.47□□□□□ -0.41
FN1-211ENST00000443816 USP26Q9BXU7 913 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 PTPRTO14522 1441 aa12.47□□□□□ -0.41
FN1-211ENST00000443816 ERCC6LQ2NKX8 1250 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 CCDC25Q86WR0 208 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 UNC5CLQ8IV45 518 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 RTKN2Q8IZC4 609 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 CSGALNACT2Q8N6G5 542 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 ANAPC4Q9UJX5 808 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 CCPG1Q9ULG6 757 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 GUCA1BQ9UMX6 200 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 MYL5Q02045 173 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 PAK1Q13153 545 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms