RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 DEF6Q9H4E7 631 aa12.03□□□□□ -0.48
CALD1-210ENST00000443197 CMA1P23946 247 aa12.02□□□□□ -0.48
CALD1-210ENST00000443197 MYL5Q02045 173 aa12.02□□□□□ -0.48
CALD1-210ENST00000443197 ADAMTSL3P82987 1691 aa12.02□□□□□ -0.48
CALD1-210ENST00000443197 EN1Q05925 392 aaPredicted RBP12.02□□□□□ -0.49
CALD1-210ENST00000443197 OXER1Q8TDS5 423 aa12.02□□□□□ -0.49
CALD1-210ENST00000443197 EEF2KMTQ96G04 330 aa12.02□□□□□ -0.49
CALD1-210ENST00000443197 MXD3Q9BW11 206 aa12.02□□□□□ -0.49
CALD1-210ENST00000443197 C21orf2O43822 256 aa12.02□□□□□ -0.49
CALD1-210ENST00000443197 COBLO75128 1261 aa12.02□□□□□ -0.49
CALD1-210ENST00000443197 MMP1P03956 469 aa12.02□□□□□ -0.49
CALD1-210ENST00000443197 POLD1P28340 1107 aa12.02□□□□□ -0.49
CALD1-210ENST00000443197 SLC16A2P36021 539 aa12.02□□□□□ -0.49
CALD1-210ENST00000443197 BAG6P46379 1132 aa12.02□□□□□ -0.49
CALD1-210ENST00000443197 POSTNQ15063 836 aa12.02□□□□□ -0.49
CALD1-210ENST00000443197 WDR78Q5VTH9 848 aa12.02□□□□□ -0.49
CALD1-210ENST00000443197 C11orf57Q6ZUT1 292 aaPredicted RBP12.02□□□□□ -0.49
CALD1-210ENST00000443197 BLIDQ8IZY5 108 aa12.02□□□□□ -0.49
CALD1-210ENST00000443197 TNS2Q63HR2 1409 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 KIF28PB7ZC32 967 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 FGFR2P21802 821 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 ZNF75DP51815 510 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 LRMPQ12912 555 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 NOM1Q5C9Z4 860 aaKnown RBP12.01□□□□□ -0.49
CALD1-210ENST00000443197 SPICE1Q8N0Z3 855 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 BRIP1Q9BX63 1249 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 RNF26Q9BY78 433 aaPredicted RBP12.01□□□□□ -0.49
CALD1-210ENST00000443197 EXOC1Q9NV70 894 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 POLR3EQ9NVU0 708 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 SAMM50Q9Y512 469 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 FDPSP14324 419 aaKnown RBP12.01□□□□□ -0.49
CALD1-210ENST00000443197 RBM6P78332 1123 aaKnown RBP12.01□□□□□ -0.49
CALD1-210ENST00000443197 ST3GAL1Q11201 340 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 DPCR1Q3MIW9 517 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 ADGRA1Q86SQ6 560 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 IGDCC4Q8TDY8 1250 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 CNTNAP4Q9C0A0 1308 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 SPDYE3A6NKU9 549 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 ADRA2BP18089 450 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 CHRNA5P30532 468 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 CCT6AP40227 531 aaKnown RBP12.01□□□□□ -0.49
CALD1-210ENST00000443197 GSDMDP57764 484 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 AMPD3Q01432 767 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 PRKG1Q13976 671 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 DLGAP5Q15398 846 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 ALX1Q15699 326 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 ARHGAP29Q52LW3 1261 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 CSRNP2Q9H175 543 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 PCDHA5Q9Y5H7 936 aa12.01□□□□□ -0.49
CALD1-210ENST00000443197 URI1O94763 535 aaPredicted RBP12□□□□□ -0.49
CALD1-210ENST00000443197 CDK8P49336 464 aa12□□□□□ -0.49
CALD1-210ENST00000443197 TTLL12Q14166 644 aaPredicted RBP12□□□□□ -0.49
CALD1-210ENST00000443197 NONOQ15233 471 aaKnown RBP eCLIP12□□□□□ -0.49
CALD1-210ENST00000443197 PKD2L1Q9P0L9 805 aa12□□□□□ -0.49
CALD1-210ENST00000443197 NRBP1Q9UHY1 535 aa12□□□□□ -0.49
CALD1-210ENST00000443197 BCS1LQ9Y276 419 aa12□□□□□ -0.49
CALD1-210ENST00000443197 ATF5Q9Y2D1 282 aaPredicted RBP12□□□□□ -0.49
CALD1-210ENST00000443197 NFE2L3Q9Y4A8 694 aa12□□□□□ -0.49
CALD1-210ENST00000443197 ABCC12Q96J65 1359 aa12□□□□□ -0.49
CALD1-210ENST00000443197 GDF11O95390 407 aa12□□□□□ -0.49
CALD1-210ENST00000443197 RAD51AP2Q09MP3 1159 aa12□□□□□ -0.49
CALD1-210ENST00000443197 KRT79Q5XKE5 535 aa12□□□□□ -0.49
CALD1-210ENST00000443197 KCTD1Q719H9 257 aa12□□□□□ -0.49
CALD1-210ENST00000443197 TMEM87AQ8NBN3 555 aa12□□□□□ -0.49
CALD1-210ENST00000443197 PPP1R9BQ96SB3 815 aa12□□□□□ -0.49
CALD1-210ENST00000443197 ALDH8A1Q9H2A2 487 aaPredicted RBP12□□□□□ -0.49
CALD1-210ENST00000443197 GOLPH3LQ9H4A5 285 aa12□□□□□ -0.49
CALD1-210ENST00000443197 SERPINB13Q9UIV8 391 aa12□□□□□ -0.49
CALD1-210ENST00000443197 SMIM22K7EJ46 135 aa12□□□□□ -0.49
CALD1-210ENST00000443197 DDAH1O94760 285 aa12□□□□□ -0.49
CALD1-210ENST00000443197 NPR1P16066 1061 aa12□□□□□ -0.49
CALD1-210ENST00000443197 REXO1Q8N1G1 1221 aaKnown RBP12□□□□□ -0.49
CALD1-210ENST00000443197 KCNB2Q92953 911 aa12□□□□□ -0.49
CALD1-210ENST00000443197 CNKSR1Q969H4 720 aa12□□□□□ -0.49
CALD1-210ENST00000443197 ZNF512BQ96KM6 892 aaPredicted RBP12□□□□□ -0.49
CALD1-210ENST00000443197 MRPL12P52815 198 aaKnown RBP12□□□□□ -0.49
CALD1-210ENST00000443197 NLRP12P59046 1061 aa12□□□□□ -0.49
CALD1-210ENST00000443197 RGPD2P0DJD1 1756 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 FANCCQ00597 558 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 CERKLQ49MI3 558 aaPredicted RBP11.99□□□□□ -0.49
CALD1-210ENST00000443197 SLC27A3Q5K4L6 730 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 FBXO33Q7Z6M2 555 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 TICAM2Q86XR7 235 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 CERS3Q8IU89 383 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 CPXCR1Q8N123 301 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 TBC1D16Q8TBP0 767 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 COA7Q96BR5 231 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 XPO4Q9C0E2 1151 aaKnown RBP11.99□□□□□ -0.49
CALD1-210ENST00000443197 PNPLA7Q6ZV29 1317 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 CCP110O43303 1012 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 GYS1P13807 737 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 HS1BP3Q53T59 392 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 TCERG1LQ5VWI1 586 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 KRBA2Q6ZNG9 492 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 KIF18AQ8NI77 898 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 SYMPKQ92797 1274 aaKnown RBP11.99□□□□□ -0.49
CALD1-210ENST00000443197 EPSTI1Q96J88 318 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 VPS16Q9H269 839 aa11.99□□□□□ -0.49
CALD1-210ENST00000443197 TECP42680 631 aa11.98□□□□□ -0.49
CALD1-210ENST00000443197 DYMQ7RTS9 669 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms