RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 DEF6Q9H4E7 631 aa13.52□□□□□ -0.25
LTBR-203ENST00000441074 ADGRG1Q9Y653 693 aa13.52□□□□□ -0.25
LTBR-203ENST00000441074 CCDC102BQ68D86 513 aa13.51□□□□□ -0.25
LTBR-203ENST00000441074 FOXP4Q8IVH2 680 aaPredicted RBP13.51□□□□□ -0.25
LTBR-203ENST00000441074 ARHGEF1Q92888 912 aaKnown RBP13.51□□□□□ -0.25
LTBR-203ENST00000441074 CCDC102AQ96A19 550 aa13.51□□□□□ -0.25
LTBR-203ENST00000441074 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.51□□□□□ -0.25
LTBR-203ENST00000441074 NAA15Q9BXJ9 866 aaKnown RBP13.51□□□□□ -0.25
LTBR-203ENST00000441074 SUGCTQ9HAC7 445 aa13.51□□□□□ -0.25
LTBR-203ENST00000441074 PCDHA5Q9Y5H7 936 aa13.51□□□□□ -0.25
LTBR-203ENST00000441074 ABCC12Q96J65 1359 aa13.51□□□□□ -0.25
LTBR-203ENST00000441074 A0A0G2JLW4 131 aa13.51□□□□□ -0.25
LTBR-203ENST00000441074 AKR1B15C9JRZ8 316 aaPredicted RBP13.51□□□□□ -0.25
LTBR-203ENST00000441074 SOCS7O14512 581 aa13.51□□□□□ -0.25
LTBR-203ENST00000441074 IMMTQ16891 758 aaKnown RBP13.51□□□□□ -0.25
LTBR-203ENST00000441074 ENOX1Q8TC92 643 aaKnown RBP13.51□□□□□ -0.25
LTBR-203ENST00000441074 RAI14Q9P0K7 980 aa13.51□□□□□ -0.25
LTBR-203ENST00000441074 DDX60Q8IY21 1712 aaKnown RBP13.5□□□□□ -0.25
LTBR-203ENST00000441074 BMP6P22004 513 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 CDC27P30260 824 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 VSNL1P62760 191 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 MTF1Q14872 753 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 PTPAQ15257 358 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 PAXIP1Q6ZW49 1069 aaPredicted RBP13.5□□□□□ -0.25
LTBR-203ENST00000441074 LZTFL1Q9NQ48 299 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 FBXO3Q9UK99 471 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 CTAGE9A4FU28 777 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 NR1I3Q14994 352 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 WHAMMP3Q1A5X7 153 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 KIF4BQ2VIQ3 1234 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 LONRF3Q496Y0 759 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 WWC2Q6AWC2 1192 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 DRC1Q96MC2 740 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 VIPAS39Q9H9C1 493 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 GPHNQ9NQX3 736 aaPredicted RBP13.5□□□□□ -0.25
LTBR-203ENST00000441074 GJB4Q9NTQ9 266 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 HPS5Q9UPZ3 1129 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 NFE2L3Q9Y4A8 694 aa13.5□□□□□ -0.25
LTBR-203ENST00000441074 A0A087WUV0 522 aaPredicted RBP13.49□□□□□ -0.25
LTBR-203ENST00000441074 SOWAHDA6NJG2 315 aa13.49□□□□□ -0.25
LTBR-203ENST00000441074 M0R2C6 588 aa13.49□□□□□ -0.25
LTBR-203ENST00000441074 CPLX1O14810 134 aa13.49□□□□□ -0.25
LTBR-203ENST00000441074 MDM2Q00987 491 aaPredicted RBP13.49□□□□□ -0.25
LTBR-203ENST00000441074 DNAJC21Q5F1R6 531 aaKnown RBP13.49□□□□□ -0.25
LTBR-203ENST00000441074 ZNF569Q5MCW4 686 aa13.49□□□□□ -0.25
LTBR-203ENST00000441074 SWT1Q5T5J6 900 aaKnown RBP13.49□□□□□ -0.25
LTBR-203ENST00000441074 MLKLQ8NB16 471 aa13.49□□□□□ -0.25
LTBR-203ENST00000441074 FAM107BQ9H098 131 aa13.49□□□□□ -0.25
LTBR-203ENST00000441074 FAM204AQ9H8W3 233 aa13.49□□□□□ -0.25
LTBR-203ENST00000441074 DACH1Q9UI36 760 aa13.49□□□□□ -0.25
LTBR-203ENST00000441074 LOC102724159A0A0B4J2E5 919 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 KLF18A0A0U1RQI7 1052 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 CTAGE15A4D2H0 777 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 RHOXF2BP0C7M4 288 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 CTAGE8P0CG41 777 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 AARSP49588 968 aaKnown RBP eCLIP13.48□□□□□ -0.25
LTBR-203ENST00000441074 PWP2Q15269 919 aaKnown RBP13.48□□□□□ -0.25
LTBR-203ENST00000441074 RAD9BQ6WBX8 426 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 MMS22LQ6ZRQ5 1243 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 CTAGE6Q86UF2 777 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 CTAGE4Q8IX94 777 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 RHOXF2Q9BQY4 288 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 HOOK1Q9UJC3 728 aaKnown RBP13.48□□□□□ -0.25
LTBR-203ENST00000441074 KCNH3Q9ULD8 1083 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 RTCBQ9Y3I0 505 aaKnown RBP13.48□□□□□ -0.25
LTBR-203ENST00000441074 GOLGA8BA8MQT2 603 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 RPS6KA4O75676 772 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 HSP90AA4PQ58FG1 418 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 WDR93Q6P2C0 686 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 RASGRP2Q7LDG7 609 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 TADA2BQ86TJ2 420 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 MB21D2Q8IYB1 491 aaPredicted RBP13.48□□□□□ -0.25
LTBR-203ENST00000441074 VGLL2Q8N8G2 317 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 CTCFLQ8NI51 663 aaPredicted RBP13.48□□□□□ -0.25
LTBR-203ENST00000441074 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.48□□□□□ -0.25
LTBR-203ENST00000441074 MAN1B1Q9UKM7 699 aa13.48□□□□□ -0.25
LTBR-203ENST00000441074 A0A1B0GTH6 734 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 LRRIQ3A6PVS8 624 aaPredicted RBP13.47□□□□□ -0.25
LTBR-203ENST00000441074 PRC1O43663 620 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 PHACTR2O75167 634 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 ZPR1O75312 459 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 ZAP70P43403 619 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 MMP14P50281 582 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 FMR1Q06787 632 aaKnown RBP eCLIP13.47□□□□□ -0.25
LTBR-203ENST00000441074 ZNF827Q17R98 1081 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 MCTP2Q6DN12 878 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 NCOA7Q8NI08 942 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 AFAP1L1Q8TED9 768 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 OSBP2Q969R2 916 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 MAP3K14Q99558 947 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 RIC1Q4ADV7 1423 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 CNTNAP4Q9C0A0 1308 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 RGPD3A6NKT7 1758 aaPredicted RBP13.47□□□□□ -0.25
LTBR-203ENST00000441074 RGPD4Q7Z3J3 1758 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 PARP10Q53GL7 1025 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 TTC39AQ5SRH9 613 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 NT5DC1Q5TFE4 455 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 RALYLQ86SE5 291 aaKnown RBP13.47□□□□□ -0.25
LTBR-203ENST00000441074 CLIC6Q96NY7 704 aa13.47□□□□□ -0.25
LTBR-203ENST00000441074 CEP89Q96ST8 783 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 202.8 ms