RNA–Protein interactions for RNA: ENST00000440125.5

STRC-203, Transcript of stereocilin, humanhuman

TSL 1 (best)

Gene STRC, Length 4,291 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-203ENST00000440125 CFAP58Q5T655 872 aa12.63□□□□□ -0.39
STRC-203ENST00000440125 KRT79Q5XKE5 535 aa12.63□□□□□ -0.39
STRC-203ENST00000440125 FCHSD1Q86WN1 690 aa12.63□□□□□ -0.39
STRC-203ENST00000440125 DHX40Q8IX18 779 aaKnown RBP12.63□□□□□ -0.39
STRC-203ENST00000440125 TRIML1Q8N9V2 468 aa12.63□□□□□ -0.39
STRC-203ENST00000440125 SMARCC2Q8TAQ2 1214 aa12.63□□□□□ -0.39
STRC-203ENST00000440125 PARD6BQ9BYG5 372 aa12.63□□□□□ -0.39
STRC-203ENST00000440125 EPC1Q9H2F5 836 aa12.63□□□□□ -0.39
STRC-203ENST00000440125 BCAMP50895 628 aa12.63□□□□□ -0.39
STRC-203ENST00000440125 CDC23Q9UJX2 597 aa12.63□□□□□ -0.39
STRC-203ENST00000440125 SOWAHDA6NJG2 315 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 KCNJ18B7U540 433 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 COL3A1P02461 1466 aaPredicted RBP12.62□□□□□ -0.39
STRC-203ENST00000440125 PCCAP05165 728 aaPredicted RBP12.62□□□□□ -0.39
STRC-203ENST00000440125 KCNJ12Q14500 433 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 SND1Q7KZF4 910 aaKnown RBP eCLIP12.62□□□□□ -0.39
STRC-203ENST00000440125 VWDEQ8N2E2 1590 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 OTUD6BQ8N6M0 293 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 ZBTB38Q8NAP3 1195 aaPredicted RBP12.62□□□□□ -0.39
STRC-203ENST00000440125 SYMPKQ92797 1274 aaKnown RBP12.62□□□□□ -0.39
STRC-203ENST00000440125 PLCD4Q9BRC7 762 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 SALL3Q9BXA9 1300 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 PLEKHA4Q9H4M7 779 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 AATFQ9NY61 560 aaKnown RBP eCLIP12.62□□□□□ -0.39
STRC-203ENST00000440125 SAR1BQ9Y6B6 198 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 SPATA31D1Q6ZQQ2 1576 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 GOLGA6CA6NDK9 693 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 GOLGA6DP0CG33 693 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 SSR1P43307 286 aaKnown RBP12.62□□□□□ -0.39
STRC-203ENST00000440125 PTGDRQ13258 359 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 MORC3Q14149 939 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 SRGAP1Q7Z6B7 1085 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 GOLGA6AQ9NYA3 693 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 ERBB3P21860 1342 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 USP42Q9H9J4 1324 aaKnown RBP12.62□□□□□ -0.39
STRC-203ENST00000440125 USP17L12C9JPN9 530 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 USP17L21D6R901 530 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 CIAO1O76071 339 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 PDE8BO95263 885 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 RBL2Q08999 1139 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 UBE3CQ15386 1083 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 LRRC27Q9C0I9 530 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 OSBPL5Q9H0X9 879 aaPredicted RBP12.62□□□□□ -0.39
STRC-203ENST00000440125 ZSWIM5Q9P217 1185 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 FER1L4A9Z1Z3 1794 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 TRAF5O00463 557 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 TSGA10IPQ3SY00 556 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 SECISBP2LQ93073 1101 aaKnown RBP12.62□□□□□ -0.39
STRC-203ENST00000440125 AXIN2Q9Y2T1 843 aa12.62□□□□□ -0.39
STRC-203ENST00000440125 ENC1O14682 589 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 GYS2P54840 703 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 MAP2K1Q02750 393 aaPredicted RBP12.61□□□□□ -0.39
STRC-203ENST00000440125 CCDC51Q96ER9 411 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 INCENPQ9NQS7 918 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 MED23Q9ULK4 1368 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 GOLGA6BA6NDN3 693 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 PRKAB2O43741 272 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 ADD2P35612 726 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 TXKP42681 527 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 MAGEA1P43355 309 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 WHAMMP3Q1A5X7 153 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 ARMCX5Q6P1M9 558 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 ZCCHC17Q9NP64 241 aaKnown RBP12.61□□□□□ -0.39
STRC-203ENST00000440125 FAM207AQ9NSI2 230 aaPredicted RBP12.61□□□□□ -0.39
STRC-203ENST00000440125 PCDHB6Q9Y5E3 794 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 SH2B2O14492 632 aaPredicted RBP12.61□□□□□ -0.39
STRC-203ENST00000440125 GNA11P29992 359 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 PPP2R5BQ15173 497 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 C8orf74Q6P047 294 aa12.61□□□□□ -0.39
STRC-203ENST00000440125 EPN1Q9Y6I3 576 aaPredicted RBP12.61□□□□□ -0.39
STRC-203ENST00000440125 ERVV-2B6SEH9 535 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 H7C1W4 665 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 ZSCAN20P17040 1043 aaPredicted RBP12.6□□□□□ -0.39
STRC-203ENST00000440125 SV2BQ7L1I2 683 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 RGS22Q8NE09 1264 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 ACRBPQ8NEB7 543 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 ENOX1Q8TC92 643 aaKnown RBP12.6□□□□□ -0.39
STRC-203ENST00000440125 RRP36Q96EU6 259 aaKnown RBP12.6□□□□□ -0.39
STRC-203ENST00000440125 ALDH8A1Q9H2A2 487 aaPredicted RBP12.6□□□□□ -0.39
STRC-203ENST00000440125 ZC3H13Q5T200 1668 aaKnown RBP12.6□□□□□ -0.39
STRC-203ENST00000440125 MROH5Q6ZUA9 1318 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 NDUFAB1O14561 156 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 DYMQ7RTS9 669 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 ANKRD7Q92527 254 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 RPGRQ92834 1020 aaKnown RBP12.6□□□□□ -0.39
STRC-203ENST00000440125 FUCA2Q9BTY2 467 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 ST7Q9NRC1 585 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 TFCP2L1Q9NZI6 479 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 SAP30BPQ9UHR5 308 aaKnown RBP12.6□□□□□ -0.39
STRC-203ENST00000440125 ERCC5P28715 1186 aaPredicted RBP12.6□□□□□ -0.39
STRC-203ENST00000440125 CCZ1BP86790 482 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 CCZ1P86791 482 aaPredicted RBP12.6□□□□□ -0.39
STRC-203ENST00000440125 RAPGEF1Q13905 1077 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 UIMC1Q96RL1 719 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 SETDB2Q96T68 719 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 SELENOOQ9BVL4 669 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 DENND2AQ9ULE3 1009 aa12.6□□□□□ -0.39
STRC-203ENST00000440125 F8W031 263 aaPredicted RBP12.59□□□□□ -0.39
STRC-203ENST00000440125 CCNT1O60563 726 aaKnown RBP12.59□□□□□ -0.39
STRC-203ENST00000440125 CDC25AP30304 524 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms