RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-213	ENST00000439732	CTDSPL2	Q05D32	466 aa		11.29	□□□□□ -0.6
SMARCA2-213	ENST00000439732	TAF1C	Q15572	869 aa	Predicted RBP	11.29	□□□□□ -0.6
SMARCA2-213	ENST00000439732	NOM1	Q5C9Z4	860 aa	Known RBP	11.29	□□□□□ -0.6
SMARCA2-213	ENST00000439732	MFSD6	Q6ZSS7	791 aa		11.29	□□□□□ -0.6
SMARCA2-213	ENST00000439732	SKAP1	Q86WV1	359 aa		11.29	□□□□□ -0.6
SMARCA2-213	ENST00000439732	STK11IP	Q8N1F8	1099 aa		11.29	□□□□□ -0.6
SMARCA2-213	ENST00000439732	FEZ1	Q99689	392 aa		11.29	□□□□□ -0.6
SMARCA2-213	ENST00000439732	ESYT1	Q9BSJ8	1104 aa		11.29	□□□□□ -0.6
SMARCA2-213	ENST00000439732	KIAA1683	Q9H0B3	1180 aa		11.29	□□□□□ -0.6
SMARCA2-213	ENST00000439732		U3KPZ7	1027 aa	Predicted RBP	11.29	□□□□□ -0.6
SMARCA2-213	ENST00000439732	PHIP	Q8WWQ0	1821 aa		11.29	□□□□□ -0.6
SMARCA2-213	ENST00000439732	LAMB1	P07942	1786 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	SMIM22	K7EJ46	135 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	PDHX	O00330	501 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	PRDM1	O75626	825 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	FGR	P09769	529 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	GUCY1A2	P33402	732 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	HMGCS2	P54868	508 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	TFAP4	Q01664	338 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	ICA1	Q05084	483 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	MTMR2	Q13614	643 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	MOGS	Q13724	837 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	AKNAD1	Q5T1N1	836 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	CCDC84	Q86UT8	332 aa	Predicted RBP	11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	NEDD1	Q8NHV4	660 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	PRDM10	Q9NQV6	1147 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	PNMA3	Q9UL41	463 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	AGTPBP1	Q9UPW5	1226 aa		11.28	□□□□□ -0.6
SMARCA2-213	ENST00000439732	TSPY2	A6NKD2	308 aa		11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	RANBP6	O60518	1105 aa	Known RBP	11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	TBC1D8	O95759	1140 aa		11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	HSPA8	P11142	646 aa	Known RBP	11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	OSBP	P22059	807 aa		11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	HAND2	P61296	217 aa		11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	ATP2B2	Q01814	1243 aa		11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	ARHGEF6	Q15052	776 aa		11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	GPAT2	Q6NUI2	795 aa		11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	FAM43A	Q8N2R8	423 aa		11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	ACER1	Q8TDN7	264 aa		11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	STAG1	Q8WVM7	1258 aa		11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	MAP4K1	Q92918	833 aa		11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	PARK7	Q99497	189 aa	Known RBP	11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	CNNM2	Q9H8M5	875 aa		11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	TOMM22	Q9NS69	142 aa		11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	NYAP2	Q9P242	653 aa		11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	PTPRF	P10586	1907 aa		11.27	□□□□□ -0.61
SMARCA2-213	ENST00000439732	TLR2	O60603	784 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	EIF5B	O60841	1220 aa	Known RBP	11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	TTLL1	O95922	423 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	EEF2	P13639	858 aa	Known RBP	11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	HOXA7	P31268	230 aa	Predicted RBP	11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	LBX1	P52954	281 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	PTH1R	Q03431	593 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	TRDN	Q13061	729 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	CRHR2	Q13324	411 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	CCDC178	Q5BJE1	867 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	LPAR1	Q92633	364 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	ESR2	Q92731	530 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	MKL1	Q969V6	931 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	C12orf42	Q96LP6	360 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	KRT23	Q9C075	422 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	GOPC	Q9HD26	462 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	EMILIN3	Q9NT22	766 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	SYNPO2	Q9UMS6	1093 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	TMX2	Q9Y320	296 aa		11.26	□□□□□ -0.61
SMARCA2-213	ENST00000439732	USP17L15	C9J2P7	530 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	USP17L13	C9JLJ4	530 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	USP17L11	C9JVI0	530 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	USP17L18	D6R9N7	530 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	USP17L22	D6RA61	530 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	USP17L17	D6RBQ6	530 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	USP17L19	D6RCP7	530 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	USP17L20	D6RJB6	530 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	GPR25	O00155	361 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	FKTN	O75072	461 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	GCLC	P48506	637 aa	Predicted RBP	11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	IRX3	P78415	501 aa	Predicted RBP	11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	USP17L24	Q0WX57	530 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	FAM47A	Q5JRC9	791 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	RRP12	Q5JTH9	1297 aa	Known RBP	11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	SIAH1	Q8IUQ4	282 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	IL25	Q9H293	177 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	ANO2	Q9NQ90	1003 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	TCP11L1	Q9NUJ3	509 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	MTMR4	Q9NYA4	1195 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	CLIP2	Q9UDT6	1046 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	TSKS	Q9UJT2	592 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	CASP8AP2	Q9UKL3	1982 aa		11.25	□□□□□ -0.61
SMARCA2-213	ENST00000439732	IGKV6D-41	A0A0C4DH26	115 aa		11.24	□□□□□ -0.61
SMARCA2-213	ENST00000439732		A0A1W2PRG0	241 aa		11.24	□□□□□ -0.61
SMARCA2-213	ENST00000439732	REC8	O95072	547 aa		11.24	□□□□□ -0.61
SMARCA2-213	ENST00000439732	SP3	Q02447	781 aa		11.24	□□□□□ -0.61
SMARCA2-213	ENST00000439732	ZYX	Q15942	572 aa	Known RBP	11.24	□□□□□ -0.61
SMARCA2-213	ENST00000439732	TREML2	Q5T2D2	321 aa		11.24	□□□□□ -0.61
SMARCA2-213	ENST00000439732	RNF20	Q5VTR2	975 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms