RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 IQCA1LA6NCM1 817 aa12.99□□□□□ -0.33
LMO3-207ENST00000439600 F8W031 263 aaPredicted RBP12.99□□□□□ -0.33
LMO3-207ENST00000439600 MYO1BO43795 1136 aa12.99□□□□□ -0.33
LMO3-207ENST00000439600 GNAT2P19087 354 aa12.99□□□□□ -0.33
LMO3-207ENST00000439600 DLGAP5Q15398 846 aa12.99□□□□□ -0.33
LMO3-207ENST00000439600 ZMYM1Q5SVZ6 1142 aa12.99□□□□□ -0.33
LMO3-207ENST00000439600 COL13A1Q5TAT6 717 aaPredicted RBP12.99□□□□□ -0.33
LMO3-207ENST00000439600 KIAA1211Q6ZU35 1233 aa12.99□□□□□ -0.33
LMO3-207ENST00000439600 AIDAQ96BJ3 306 aa12.99□□□□□ -0.33
LMO3-207ENST00000439600 ZDHHC15Q96MV8 337 aa12.99□□□□□ -0.33
LMO3-207ENST00000439600 FER1L6Q2WGJ9 1857 aa12.98□□□□□ -0.33
LMO3-207ENST00000439600 RAD50Q92878 1312 aa12.98□□□□□ -0.33
LMO3-207ENST00000439600 GPR75-ASB3A0A0A6YYF3 556 aa12.98□□□□□ -0.33
LMO3-207ENST00000439600 MAGEB6P1A0A0J9YX57 407 aa12.98□□□□□ -0.33
LMO3-207ENST00000439600 LZTS3O60299 673 aaPredicted RBP12.98□□□□□ -0.33
LMO3-207ENST00000439600 GGCXP38435 758 aa12.98□□□□□ -0.33
LMO3-207ENST00000439600 CRKP46108 304 aa12.98□□□□□ -0.33
LMO3-207ENST00000439600 GMPSP49915 693 aaPredicted RBP12.98□□□□□ -0.33
LMO3-207ENST00000439600 ZNF280AP59817 542 aaPredicted RBP12.98□□□□□ -0.33
LMO3-207ENST00000439600 SLFNL1Q499Z3 407 aa12.98□□□□□ -0.33
LMO3-207ENST00000439600 CWC27Q6UX04 472 aaKnown RBP12.98□□□□□ -0.33
LMO3-207ENST00000439600 SH3RF1Q7Z6J0 888 aa12.98□□□□□ -0.33
LMO3-207ENST00000439600 RNF166Q96A37 237 aaPredicted RBP12.98□□□□□ -0.33
LMO3-207ENST00000439600 MXD3Q9BW11 206 aa12.98□□□□□ -0.33
LMO3-207ENST00000439600 USTQ9Y2C2 406 aa12.98□□□□□ -0.33
LMO3-207ENST00000439600 ARAP2Q8WZ64 1704 aa12.98□□□□□ -0.33
LMO3-207ENST00000439600 MROH7-TTC4A0A0A0MT08 1334 aa12.97□□□□□ -0.33
LMO3-207ENST00000439600 ZNF541Q9H0D2 1346 aa12.97□□□□□ -0.33
LMO3-207ENST00000439600 TCRBV5S4A2TA0A5A2 114 aa12.97□□□□□ -0.33
LMO3-207ENST00000439600 EPB41L2O43491 1005 aaKnown RBP12.97□□□□□ -0.33
LMO3-207ENST00000439600 DDNO94850 711 aaPredicted RBP12.97□□□□□ -0.33
LMO3-207ENST00000439600 REC8O95072 547 aa12.97□□□□□ -0.33
LMO3-207ENST00000439600 KCTD17Q8N5Z5 321 aa12.97□□□□□ -0.33
LMO3-207ENST00000439600 MYOZ2Q9NPC6 264 aa12.97□□□□□ -0.33
LMO3-207ENST00000439600 GPRC5DQ9NZD1 345 aa12.97□□□□□ -0.33
LMO3-207ENST00000439600 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
LMO3-207ENST00000439600 RPAP1Q9BWH6 1393 aaPredicted RBP12.96□□□□□ -0.33
LMO3-207ENST00000439600 GAKO14976 1311 aa12.96□□□□□ -0.33
LMO3-207ENST00000439600 ATG7O95352 703 aa12.96□□□□□ -0.33
LMO3-207ENST00000439600 SCNN1DP51172 638 aa12.96□□□□□ -0.33
LMO3-207ENST00000439600 NMIQ13287 307 aaPredicted RBP12.96□□□□□ -0.33
LMO3-207ENST00000439600 CFAP100Q494V2 611 aa12.96□□□□□ -0.33
LMO3-207ENST00000439600 ZNF511Q8NB15 262 aa12.96□□□□□ -0.33
LMO3-207ENST00000439600 BAP1Q92560 729 aa12.96□□□□□ -0.33
LMO3-207ENST00000439600 CRNKL1Q9BZJ0 848 aaKnown RBP12.96□□□□□ -0.33
LMO3-207ENST00000439600 NACAP1Q9BZK3 213 aa12.96□□□□□ -0.33
LMO3-207ENST00000439600 ADARB2Q9NS39 739 aaKnown RBP12.96□□□□□ -0.33
LMO3-207ENST00000439600 TMOD2Q9NZR1 351 aa12.96□□□□□ -0.33
LMO3-207ENST00000439600 HACL1Q9UJ83 578 aa12.96□□□□□ -0.33
LMO3-207ENST00000439600 PATL2C9JE40 543 aaKnown RBP12.95□□□□□ -0.34
LMO3-207ENST00000439600 SGSM2O43147 1006 aa12.95□□□□□ -0.34
LMO3-207ENST00000439600 BTDP43251 543 aa12.95□□□□□ -0.34
LMO3-207ENST00000439600 GRIK5Q16478 980 aa12.95□□□□□ -0.34
LMO3-207ENST00000439600 USP50Q70EL3 339 aaPredicted RBP12.95□□□□□ -0.34
LMO3-207ENST00000439600 PNMA8AQ86V59 439 aaPredicted RBP12.95□□□□□ -0.34
LMO3-207ENST00000439600 OSBP2Q969R2 916 aa12.95□□□□□ -0.34
LMO3-207ENST00000439600 ESYT1Q9BSJ8 1104 aa12.95□□□□□ -0.34
LMO3-207ENST00000439600 PUS7LQ9H0K6 701 aaKnown RBP12.95□□□□□ -0.34
LMO3-207ENST00000439600 VRTNQ9H8Y1 702 aa12.95□□□□□ -0.34
LMO3-207ENST00000439600 USP40Q9NVE5 1235 aa12.95□□□□□ -0.34
LMO3-207ENST00000439600 DAGLAQ9Y4D2 1042 aa12.95□□□□□ -0.34
LMO3-207ENST00000439600 CACNA1SQ13698 1873 aa12.95□□□□□ -0.34
LMO3-207ENST00000439600 A0A1B0GUL6 1792 aa12.94□□□□□ -0.34
LMO3-207ENST00000439600 SKIP12755 728 aa12.94□□□□□ -0.34
LMO3-207ENST00000439600 APOBEC3HQ6NTF7 200 aaKnown RBP12.94□□□□□ -0.34
LMO3-207ENST00000439600 GIMAP6Q6P9H5 292 aa12.94□□□□□ -0.34
LMO3-207ENST00000439600 PHTF2Q8N3S3 785 aa12.94□□□□□ -0.34
LMO3-207ENST00000439600 ANKLE1Q8NAG6 615 aa12.94□□□□□ -0.34
LMO3-207ENST00000439600 MIGA1Q8NAN2 632 aa12.94□□□□□ -0.34
LMO3-207ENST00000439600 FAM227BQ96M60 508 aa12.94□□□□□ -0.34
LMO3-207ENST00000439600 STRBPQ96SI9 672 aaKnown RBP12.94□□□□□ -0.34
LMO3-207ENST00000439600 UPF2Q9HAU5 1272 aaKnown RBP12.94□□□□□ -0.34
LMO3-207ENST00000439600 ATP8A2Q9NTI2 1148 aa12.94□□□□□ -0.34
LMO3-207ENST00000439600 AATFQ9NY61 560 aaKnown RBP eCLIP12.94□□□□□ -0.34
LMO3-207ENST00000439600 CTNNA3Q9UI47 895 aa12.94□□□□□ -0.34
LMO3-207ENST00000439600 CCDC171Q6TFL3 1326 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 COL4A5P29400 1685 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 USP17L5A8MUK1 530 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 PIK3CDO00329 1044 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 GPAA1O43292 621 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 MBD4O95243 580 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 APPP05067 770 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 VEGFAP15692 232 aaPredicted RBP12.93□□□□□ -0.34
LMO3-207ENST00000439600 USP5P45974 858 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 TNNI2P48788 182 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 TNFAIP1Q13829 316 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 AGERQ15109 404 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 KIF4BQ2VIQ3 1234 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 MAP7D1Q3KQU3 841 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 FKBP1CQ5VVH2 108 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 RNF135Q8IUD6 432 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 AMOTL1Q8IY63 956 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 ZNF384Q8TF68 577 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 PRMT6Q96LA8 375 aaPredicted RBP12.93□□□□□ -0.34
LMO3-207ENST00000439600 RIOK1Q9BRS2 568 aaKnown RBP12.93□□□□□ -0.34
LMO3-207ENST00000439600 DSCC1Q9BVC3 393 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 CDV3Q9UKY7 258 aaKnown RBP12.93□□□□□ -0.34
LMO3-207ENST00000439600 SLC4A4Q9Y6R1 1079 aa12.93□□□□□ -0.34
LMO3-207ENST00000439600 A0A0D9SFI3 127 aa12.92□□□□□ -0.34
LMO3-207ENST00000439600 WNT10BO00744 389 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms