RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SYNE4Q8N205 404 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 BCAS4Q8TDM0 211 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 DCAF5Q96JK2 942 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 L1RE1Q9UN81 338 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 EPN1Q9Y6I3 576 aaPredicted RBP10.2□□□□□ -0.78
COPB1-202ENST00000439561 TSPOAP1O95153 1857 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 ANKRD18BA2A2Z9 1011 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 SNAP23O00161 211 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 ERLIN2O94905 339 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 MMP1P03956 469 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 PTPREP23469 700 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 NR1I3Q14994 352 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 TTF1Q15361 905 aaPredicted RBP10.2□□□□□ -0.78
COPB1-202ENST00000439561 NELFBQ8WX92 580 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 CHP1Q99653 195 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 MED4Q9NPJ6 270 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 STRN4Q9NRL3 753 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 NCAPD2Q15021 1401 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 RFX7Q2KHR2 1363 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 KCNJ18B7U540 433 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 PRKAB2O43741 272 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 KRT86O43790 486 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 DEXIO95424 95 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 PDE6AP16499 860 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 MCAMP43121 646 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 MTIF2P46199 727 aaKnown RBP10.2□□□□□ -0.78
COPB1-202ENST00000439561 ATP1A2P50993 1020 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 PAK1Q13153 545 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 MORC3Q14149 939 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 KCNJ12Q14500 433 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 KRT31Q15323 416 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 CTCFLQ8NI51 663 aaPredicted RBP10.2□□□□□ -0.78
COPB1-202ENST00000439561 JAKMIP2Q96AA8 810 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 TRMT112Q9UI30 125 aaKnown RBP10.2□□□□□ -0.78
COPB1-202ENST00000439561 ITGA6P23229 1130 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 ERCC5P28715 1186 aaPredicted RBP10.19□□□□□ -0.78
COPB1-202ENST00000439561 KRT2P35908 639 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 PHKA1P46020 1223 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 GNGT1P63211 74 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 CKAP4Q07065 602 aaKnown RBP10.19□□□□□ -0.78
COPB1-202ENST00000439561 C2orf54Q08AI8 447 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 TRIML1Q8N9V2 468 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 MAP3K14Q99558 947 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 RIMBP3CA6NJZ7 1639 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 RIMBP3BA6NNM3 1639 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 RIMBP3Q9UFD9 1639 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 A0A1B0GTH6 734 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 H7C1W4 665 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 ATP2C2O75185 946 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 ZPR1O75312 459 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 GYPCP04921 128 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 RDXP35241 583 aaKnown RBP10.19□□□□□ -0.78
COPB1-202ENST00000439561 GGCXP38435 758 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 STAT6P42226 847 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 COPB1P53618 953 aaKnown RBP10.19□□□□□ -0.78
COPB1-202ENST00000439561 RNASE9P60153 205 aaKnown RBP10.19□□□□□ -0.78
COPB1-202ENST00000439561 CYP27A1Q02318 531 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 SPAG1Q07617 926 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 SLC20A2Q08357 652 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 TBX2Q13207 712 aaPredicted RBP10.19□□□□□ -0.78
COPB1-202ENST00000439561 KCTD16Q68DU8 428 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 IQCEQ6IPM2 695 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 PROSER2Q86WR7 435 aaPredicted RBP10.19□□□□□ -0.78
COPB1-202ENST00000439561 IQUBQ8NA54 791 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 KRT23Q9C075 422 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 TANGO6Q9C0B7 1094 aa10.19□□□□□ -0.78
COPB1-202ENST00000439561 PIH1D3Q9NQM4 214 aaKnown RBP10.19□□□□□ -0.78
COPB1-202ENST00000439561 FBXO2Q9UK22 296 aaPredicted RBP10.19□□□□□ -0.78
COPB1-202ENST00000439561 NDUFAB1O14561 156 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 CD44P16070 742 aaKnown RBP10.18□□□□□ -0.78
COPB1-202ENST00000439561 LRRC31Q6UY01 552 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 PIK3AP1Q6ZUJ8 805 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 PACS2Q86VP3 889 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 PAGE5Q96GU1 130 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 ABHD10Q9NUJ1 306 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 PPFIA4O75335 1185 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 TUBBP07437 444 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 CYLC1P35663 651 aaPredicted RBP10.18□□□□□ -0.78
COPB1-202ENST00000439561 TUBB4BP68371 445 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 KIF5AQ12840 1032 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 TUBB2AQ13885 445 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 ANKLE2Q86XL3 938 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 IFNL3Q8IZI9 196 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 ZNF654Q8IZM8 581 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 IFT81Q8WYA0 676 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 TUBB2BQ9BVA1 445 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 LY9Q9HBG7 655 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 GPR108Q9NPR9 543 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 SEC31BQ9NQW1 1179 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 PSD3Q9NYI0 1048 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 JCADQ9P266 1359 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 NBPF26B4DH59 902 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 MAP2K7O14733 419 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 ZNF185O15231 689 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 FMNL1O95466 1100 aaPredicted RBP10.18□□□□□ -0.78
COPB1-202ENST00000439561 ATP1A1P05023 1023 aaKnown RBP10.18□□□□□ -0.78
COPB1-202ENST00000439561 INPP5BP32019 993 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 CXCR5P32302 372 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 ADD2P35612 726 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 SLC7A5Q01650 507 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms