RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 EAPPQ56P03 285 aaPredicted RBP11.72□□□□□ -0.53
CBX5-202ENST00000439541 IFIT1BQ5T764 474 aaKnown RBP11.72□□□□□ -0.53
CBX5-202ENST00000439541 NEDD1Q8NHV4 660 aa11.72□□□□□ -0.53
CBX5-202ENST00000439541 ZNF526Q8TF50 670 aaPredicted RBP11.72□□□□□ -0.53
CBX5-202ENST00000439541 TAF1DQ9H5J8 278 aaPredicted RBP11.72□□□□□ -0.53
CBX5-202ENST00000439541 SH2B1Q9NRF2 756 aaPredicted RBP11.72□□□□□ -0.53
CBX5-202ENST00000439541 SCN4AP35499 1836 aa11.71□□□□□ -0.54
CBX5-202ENST00000439541 CCDC69A6NI79 296 aa11.71□□□□□ -0.54
CBX5-202ENST00000439541 MRE11P49959 708 aa11.71□□□□□ -0.54
CBX5-202ENST00000439541 EVCP57679 992 aa11.71□□□□□ -0.54
CBX5-202ENST00000439541 CERKLQ49MI3 558 aaPredicted RBP11.71□□□□□ -0.54
CBX5-202ENST00000439541 TATDN1Q6P1N9 297 aa11.71□□□□□ -0.54
CBX5-202ENST00000439541 SGMS1Q86VZ5 419 aa11.71□□□□□ -0.54
CBX5-202ENST00000439541 ZNF654Q8IZM8 581 aa11.71□□□□□ -0.54
CBX5-202ENST00000439541 ZSCAN31Q96LW9 406 aaPredicted RBP11.71□□□□□ -0.54
CBX5-202ENST00000439541 STX8Q9UNK0 236 aa11.71□□□□□ -0.54
CBX5-202ENST00000439541 MTMR7Q9Y216 660 aa11.71□□□□□ -0.54
CBX5-202ENST00000439541 IGKV6D-41A0A0C4DH26 115 aa11.7□□□□□ -0.54
CBX5-202ENST00000439541 JAK2O60674 1132 aa11.7□□□□□ -0.54
CBX5-202ENST00000439541 PFKFB2O60825 505 aa11.7□□□□□ -0.54
CBX5-202ENST00000439541 GH2P01242 217 aa11.7□□□□□ -0.54
CBX5-202ENST00000439541 FOXP4Q8IVH2 680 aaPredicted RBP11.7□□□□□ -0.54
CBX5-202ENST00000439541 LRRC47Q8N1G4 583 aaKnown RBP11.7□□□□□ -0.54
CBX5-202ENST00000439541 NUP133Q8WUM0 1156 aa11.7□□□□□ -0.54
CBX5-202ENST00000439541 HERC5Q9UII4 1024 aaKnown RBP11.7□□□□□ -0.54
CBX5-202ENST00000439541 SLC12A7Q9Y666 1083 aa11.7□□□□□ -0.54
CBX5-202ENST00000439541 GOLGA8AA7E2F4 631 aa11.7□□□□□ -0.54
CBX5-202ENST00000439541 ZBTB43O43298 467 aa11.7□□□□□ -0.54
CBX5-202ENST00000439541 CDC27P30260 824 aa11.7□□□□□ -0.54
CBX5-202ENST00000439541 GUCY1A2P33402 732 aa11.7□□□□□ -0.54
CBX5-202ENST00000439541 METAP2P50579 478 aaKnown RBP eCLIP11.7□□□□□ -0.54
CBX5-202ENST00000439541 SEPT2Q15019 361 aa11.7□□□□□ -0.54
CBX5-202ENST00000439541 USP50Q70EL3 339 aaPredicted RBP11.7□□□□□ -0.54
CBX5-202ENST00000439541 CCDC84Q86UT8 332 aaPredicted RBP11.7□□□□□ -0.54
CBX5-202ENST00000439541 ZNF274Q96GC6 653 aaPredicted RBP11.7□□□□□ -0.54
CBX5-202ENST00000439541 PITPNM2Q9BZ72 1349 aa11.69□□□□□ -0.54
CBX5-202ENST00000439541 IQCA1LA6NCM1 817 aa11.69□□□□□ -0.54
CBX5-202ENST00000439541 CTDNEP1O95476 244 aa11.69□□□□□ -0.54
CBX5-202ENST00000439541 ATP2B2Q01814 1243 aa11.69□□□□□ -0.54
CBX5-202ENST00000439541 ABCB5Q2M3G0 1257 aa11.69□□□□□ -0.54
CBX5-202ENST00000439541 DCPSQ96C86 337 aaKnown RBP11.69□□□□□ -0.54
CBX5-202ENST00000439541 TMEM47Q9BQJ4 181 aa11.69□□□□□ -0.54
CBX5-202ENST00000439541 MTA3Q9BTC8 594 aa11.69□□□□□ -0.54
CBX5-202ENST00000439541 TCP11L1Q9NUJ3 509 aa11.69□□□□□ -0.54
CBX5-202ENST00000439541 MTMR4Q9NYA4 1195 aa11.69□□□□□ -0.54
CBX5-202ENST00000439541 DCAF8L1A6NGE4 600 aa11.68□□□□□ -0.54
CBX5-202ENST00000439541 PRKG1Q13976 671 aa11.68□□□□□ -0.54
CBX5-202ENST00000439541 RAB3GAP1Q15042 981 aa11.68□□□□□ -0.54
CBX5-202ENST00000439541 KRT26Q7Z3Y9 468 aa11.68□□□□□ -0.54
CBX5-202ENST00000439541 CMTR1Q8N1G2 835 aaKnown RBP11.68□□□□□ -0.54
CBX5-202ENST00000439541 PNMA1Q8ND90 353 aa11.68□□□□□ -0.54
CBX5-202ENST00000439541 NSUN7Q8NE18 718 aaKnown RBP11.68□□□□□ -0.54
CBX5-202ENST00000439541 DDX11Q96FC9 970 aa11.68□□□□□ -0.54
CBX5-202ENST00000439541 GLIS2Q9BZE0 524 aaPredicted RBP11.68□□□□□ -0.54
CBX5-202ENST00000439541 KAT14Q9H8E8 782 aa11.68□□□□□ -0.54
CBX5-202ENST00000439541 RRAGCQ9HB90 399 aa11.68□□□□□ -0.54
CBX5-202ENST00000439541 NMRK2Q9NPI5 230 aa11.68□□□□□ -0.54
CBX5-202ENST00000439541 FAM217BQ9NTX9 383 aaPredicted RBP11.68□□□□□ -0.54
CBX5-202ENST00000439541 NID2Q14112 1375 aa11.68□□□□□ -0.54
CBX5-202ENST00000439541 PTPDC1A2A3K4 754 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 PHF20L1A8MW92 1017 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 TBC1D12O60347 775 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 ADD1P35611 737 aaKnown RBP11.67□□□□□ -0.54
CBX5-202ENST00000439541 TROAPQ12815 778 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 PKP1Q13835 747 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 CATIPQ7Z7H3 387 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 USP48Q86UV5 1035 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 DGKHQ86XP1 1220 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 SULF1Q8IWU6 871 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 CCDC17Q96LX7 622 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 ZBTB21Q9ULJ3 1066 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 POLR2AP24928 1970 aaKnown RBP11.67□□□□□ -0.54
CBX5-202ENST00000439541 ATAD5Q96QE3 1844 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 UBE2Q2LH0YL09 131 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 GOLGA6L22H0YM25 854 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 XRCC6P12956 609 aaKnown RBP eCLIP11.67□□□□□ -0.54
CBX5-202ENST00000439541 GJB2P29033 226 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 INPP5BP32019 993 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 NOVP48745 357 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 NT5C2P49902 561 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 MAP3K10Q02779 954 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 ICA1Q05084 483 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 RTN1Q16799 776 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 SYNE3Q6ZMZ3 975 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 TMEM179Q6ZVK1 233 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 TNPO1Q92973 898 aaKnown RBP11.67□□□□□ -0.54
CBX5-202ENST00000439541 INTS4Q96HW7 963 aaKnown RBP11.67□□□□□ -0.54
CBX5-202ENST00000439541 CLIP2Q9UDT6 1046 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 SMC3Q9UQE7 1217 aa11.67□□□□□ -0.54
CBX5-202ENST00000439541 DDAH1O94760 285 aa11.66□□□□□ -0.54
CBX5-202ENST00000439541 PLEKHA8P1O95397 391 aa11.66□□□□□ -0.54
CBX5-202ENST00000439541 TTLL1O95922 423 aa11.66□□□□□ -0.54
CBX5-202ENST00000439541 EEF2P13639 858 aaKnown RBP11.66□□□□□ -0.54
CBX5-202ENST00000439541 CAP2P40123 477 aa11.66□□□□□ -0.54
CBX5-202ENST00000439541 FOSBP53539 338 aa11.66□□□□□ -0.54
CBX5-202ENST00000439541 FMR1Q06787 632 aaKnown RBP eCLIP11.66□□□□□ -0.54
CBX5-202ENST00000439541 MAP1SQ66K74 1059 aaPredicted RBP11.66□□□□□ -0.54
CBX5-202ENST00000439541 SIAH1Q8IUQ4 282 aa11.66□□□□□ -0.54
CBX5-202ENST00000439541 TMTC2Q8N394 836 aa11.66□□□□□ -0.54
CBX5-202ENST00000439541 ANKS1AQ92625 1134 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms