RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 PCDHB15Q9Y5E8 787 aa24.5■■□□□ 1.51
NCKIPSD-206ENST00000439518 USP14P54578 494 aa24.49■■□□□ 1.51
NCKIPSD-206ENST00000439518 SEPT2Q15019 361 aa24.49■■□□□ 1.51
NCKIPSD-206ENST00000439518 GTF3C2Q8WUA4 911 aaPredicted RBP24.49■■□□□ 1.51
NCKIPSD-206ENST00000439518 CEP290O15078 2479 aa24.49■■□□□ 1.51
NCKIPSD-206ENST00000439518 USP17L15C9J2P7 530 aa24.48■■□□□ 1.51
NCKIPSD-206ENST00000439518 USP17L13C9JLJ4 530 aa24.48■■□□□ 1.51
NCKIPSD-206ENST00000439518 USP17L11C9JVI0 530 aa24.48■■□□□ 1.51
NCKIPSD-206ENST00000439518 USP17L18D6R9N7 530 aa24.48■■□□□ 1.51
NCKIPSD-206ENST00000439518 USP17L22D6RA61 530 aa24.48■■□□□ 1.51
NCKIPSD-206ENST00000439518 USP17L17D6RBQ6 530 aa24.48■■□□□ 1.51
NCKIPSD-206ENST00000439518 USP17L19D6RCP7 530 aa24.48■■□□□ 1.51
NCKIPSD-206ENST00000439518 USP17L20D6RJB6 530 aa24.48■■□□□ 1.51
NCKIPSD-206ENST00000439518 SLC34A2O95436 690 aa24.48■■□□□ 1.51
NCKIPSD-206ENST00000439518 USP17L24Q0WX57 530 aa24.48■■□□□ 1.51
NCKIPSD-206ENST00000439518 UBE2Q1Q7Z7E8 422 aa24.48■■□□□ 1.51
NCKIPSD-206ENST00000439518 SLC44A5Q8NCS7 719 aa24.48■■□□□ 1.51
NCKIPSD-206ENST00000439518 SWAP70Q9UH65 585 aa24.48■■□□□ 1.51
NCKIPSD-206ENST00000439518 MYH7P12883 1935 aa24.47■■□□□ 1.51
NCKIPSD-206ENST00000439518 VCAM1P19320 739 aa24.47■■□□□ 1.51
NCKIPSD-206ENST00000439518 RRP1P56182 461 aaKnown RBP24.47■■□□□ 1.51
NCKIPSD-206ENST00000439518 Q3C1V9 767 aa24.47■■□□□ 1.51
NCKIPSD-206ENST00000439518 C12orf60Q5U649 245 aa24.47■■□□□ 1.51
NCKIPSD-206ENST00000439518 CATSPERGQ6ZRH7 1159 aa24.47■■□□□ 1.51
NCKIPSD-206ENST00000439518 U2AF1L4Q8WU68 220 aaKnown RBP24.47■■□□□ 1.51
NCKIPSD-206ENST00000439518 DYNLL2Q96FJ2 89 aa24.47■■□□□ 1.51
NCKIPSD-206ENST00000439518 GPATCH3Q96I76 525 aa24.47■■□□□ 1.51
NCKIPSD-206ENST00000439518 PUS7LQ9H0K6 701 aaKnown RBP24.47■■□□□ 1.51
NCKIPSD-206ENST00000439518 ERVK-9P63128 1117 aa24.46■■□□□ 1.51
NCKIPSD-206ENST00000439518 ERVK-24P63145 666 aa24.46■■□□□ 1.51
NCKIPSD-206ENST00000439518 KBTBD3Q8NAB2 608 aa24.46■■□□□ 1.51
NCKIPSD-206ENST00000439518 A0A1W2PRG0 241 aa24.45■■□□□ 1.5
NCKIPSD-206ENST00000439518 USP17L12C9JPN9 530 aa24.45■■□□□ 1.5
NCKIPSD-206ENST00000439518 USP17L21D6R901 530 aa24.45■■□□□ 1.5
NCKIPSD-206ENST00000439518 SMIM22K7EJ46 135 aa24.45■■□□□ 1.5
NCKIPSD-206ENST00000439518 MPHOSPH10O00566 681 aaKnown RBP24.45■■□□□ 1.5
NCKIPSD-206ENST00000439518 SGPL1O95470 568 aa24.45■■□□□ 1.5
NCKIPSD-206ENST00000439518 MAPK4P31152 587 aa24.45■■□□□ 1.5
NCKIPSD-206ENST00000439518 TSHZ3Q63HK5 1081 aa24.45■■□□□ 1.5
NCKIPSD-206ENST00000439518 TMEM179Q6ZVK1 233 aa24.45■■□□□ 1.5
NCKIPSD-206ENST00000439518 PAGR1Q9BTK6 254 aa24.45■■□□□ 1.5
NCKIPSD-206ENST00000439518 PORCNQ9H237 461 aa24.45■■□□□ 1.5
NCKIPSD-206ENST00000439518 PAK6Q9NQU5 681 aaPredicted RBP24.45■■□□□ 1.5
NCKIPSD-206ENST00000439518 SLC4A4Q9Y6R1 1079 aa24.45■■□□□ 1.5
NCKIPSD-206ENST00000439518 PLXNB2O15031 1838 aa24.45■■□□□ 1.5
NCKIPSD-206ENST00000439518 BAZ2AQ9UIF9 1905 aaKnown RBP24.44■■□□□ 1.5
NCKIPSD-206ENST00000439518 CYP2D7A0A087X1C5 515 aa24.44■■□□□ 1.5
NCKIPSD-206ENST00000439518 HMGCRP04035 888 aa24.44■■□□□ 1.5
NCKIPSD-206ENST00000439518 RABGAP1Q9Y3P9 1069 aa24.44■■□□□ 1.5
NCKIPSD-206ENST00000439518 CNMDO75829 334 aa24.43■■□□□ 1.5
NCKIPSD-206ENST00000439518 LBX2Q6XYB7 198 aa24.43■■□□□ 1.5
NCKIPSD-206ENST00000439518 DDRGK1Q96HY6 314 aa24.43■■□□□ 1.5
NCKIPSD-206ENST00000439518 STRBPQ96SI9 672 aaKnown RBP24.43■■□□□ 1.5
NCKIPSD-206ENST00000439518 XRCC5P13010 732 aaKnown RBP24.42■■□□□ 1.5
NCKIPSD-206ENST00000439518 AKR1B1P15121 316 aa24.42■■□□□ 1.5
NCKIPSD-206ENST00000439518 CAPN2P17655 700 aa24.42■■□□□ 1.5
NCKIPSD-206ENST00000439518 CDK8P49336 464 aa24.42■■□□□ 1.5
NCKIPSD-206ENST00000439518 CTR9Q6PD62 1173 aa24.42■■□□□ 1.5
NCKIPSD-206ENST00000439518 C16orf86Q6ZW13 317 aa24.42■■□□□ 1.5
NCKIPSD-206ENST00000439518 SIAH1Q8IUQ4 282 aa24.42■■□□□ 1.5
NCKIPSD-206ENST00000439518 AMOTL1Q8IY63 956 aa24.42■■□□□ 1.5
NCKIPSD-206ENST00000439518 SOCS4Q8WXH5 440 aa24.42■■□□□ 1.5
NCKIPSD-206ENST00000439518 USP6NLQ92738 828 aa24.42■■□□□ 1.5
NCKIPSD-206ENST00000439518 CCDC17Q96LX7 622 aa24.42■■□□□ 1.5
NCKIPSD-206ENST00000439518 DEFB118Q96PH6 123 aa24.42■■□□□ 1.5
NCKIPSD-206ENST00000439518 NUDT12Q9BQG2 462 aa24.42■■□□□ 1.5
NCKIPSD-206ENST00000439518 RPAP3Q9H6T3 665 aaPredicted RBP24.42■■□□□ 1.5
NCKIPSD-206ENST00000439518 OSBP2Q969R2 916 aa24.41■■□□□ 1.5
NCKIPSD-206ENST00000439518 CRISPLD2Q9H0B8 497 aa24.41■■□□□ 1.5
NCKIPSD-206ENST00000439518 TTC41PQ6P2S7 1318 aa24.4■■□□□ 1.5
NCKIPSD-206ENST00000439518 SPDYE16A6NNV3 312 aaPredicted RBP24.4■■□□□ 1.5
NCKIPSD-206ENST00000439518 RNF113AO15541 343 aaKnown RBP24.4■■□□□ 1.5
NCKIPSD-206ENST00000439518 CYP2B6P20813 491 aa24.4■■□□□ 1.5
NCKIPSD-206ENST00000439518 TRIM32Q13049 653 aa24.4■■□□□ 1.5
NCKIPSD-206ENST00000439518 MORN1Q5T089 497 aa24.4■■□□□ 1.5
NCKIPSD-206ENST00000439518 GPR142Q7Z601 462 aa24.4■■□□□ 1.5
NCKIPSD-206ENST00000439518 PLEKHH3Q7Z736 793 aa24.4■■□□□ 1.5
NCKIPSD-206ENST00000439518 TRIB2Q92519 343 aa24.4■■□□□ 1.5
NCKIPSD-206ENST00000439518 APPBP2Q92624 585 aa24.4■■□□□ 1.5
NCKIPSD-206ENST00000439518 GCC1Q96CN9 775 aa24.4■■□□□ 1.5
NCKIPSD-206ENST00000439518 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.4■■□□□ 1.5
NCKIPSD-206ENST00000439518 GSG1L2A8MUP6 293 aa24.39■■□□□ 1.49
NCKIPSD-206ENST00000439518 FARP2O94887 1054 aaPredicted RBP24.39■■□□□ 1.49
NCKIPSD-206ENST00000439518 ZFYP08048 801 aaPredicted RBP24.39■■□□□ 1.49
NCKIPSD-206ENST00000439518 KIAA1755Q5JYT7 1200 aa24.39■■□□□ 1.49
NCKIPSD-206ENST00000439518 CLEC10AQ8IUN9 316 aa24.39■■□□□ 1.49
NCKIPSD-206ENST00000439518 CCAR1Q8IX12 1150 aaKnown RBP24.39■■□□□ 1.49
NCKIPSD-206ENST00000439518 PI4K2BQ8TCG2 481 aa24.39■■□□□ 1.49
NCKIPSD-206ENST00000439518 OTUD7AQ8TE49 926 aaPredicted RBP24.39■■□□□ 1.49
NCKIPSD-206ENST00000439518 BTBD7Q9P203 1132 aa24.39■■□□□ 1.49
NCKIPSD-206ENST00000439518 TMX2Q9Y320 296 aa24.39■■□□□ 1.49
NCKIPSD-206ENST00000439518 RPTORQ8N122 1335 aa24.38■■□□□ 1.49
NCKIPSD-206ENST00000439518 TFRCP02786 760 aaKnown RBP24.38■■□□□ 1.49
NCKIPSD-206ENST00000439518 CCNA1P78396 465 aa24.38■■□□□ 1.49
NCKIPSD-206ENST00000439518 SBK1Q52WX2 424 aa24.38■■□□□ 1.49
NCKIPSD-206ENST00000439518 MAP3K21Q5TCX8 1036 aa24.38■■□□□ 1.49
NCKIPSD-206ENST00000439518 GIMAP6Q6P9H5 292 aa24.38■■□□□ 1.49
NCKIPSD-206ENST00000439518 CRBNQ96SW2 442 aa24.38■■□□□ 1.49
NCKIPSD-206ENST00000439518 ARPP21Q9UBL0 812 aaPredicted RBP24.38■■□□□ 1.49
NCKIPSD-206ENST00000439518 ICA1Q05084 483 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms