RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 MTMR4Q9NYA4 1195 aa24.27■■□□□ 1.48
CHD3-204ENST00000439235 ZNF112Q9UJU3 913 aa24.27■■□□□ 1.48
CHD3-204ENST00000439235 ZBTB21Q9ULJ3 1066 aa24.27■■□□□ 1.48
CHD3-204ENST00000439235 TPCN1Q9ULQ1 816 aa24.27■■□□□ 1.48
CHD3-204ENST00000439235 STX8Q9UNK0 236 aa24.27■■□□□ 1.48
CHD3-204ENST00000439235 GREB1LQ9C091 1923 aaPredicted RBP24.27■■□□□ 1.48
CHD3-204ENST00000439235 ASNSP08243 561 aa24.26■■□□□ 1.47
CHD3-204ENST00000439235 NOVP48745 357 aa24.26■■□□□ 1.47
CHD3-204ENST00000439235 RRP1BQ14684 758 aaKnown RBP24.26■■□□□ 1.47
CHD3-204ENST00000439235 CHADLQ6NUI6 762 aa24.26■■□□□ 1.47
CHD3-204ENST00000439235 ZNF274Q96GC6 653 aaPredicted RBP24.26■■□□□ 1.47
CHD3-204ENST00000439235 WRNIP1Q96S55 665 aa24.26■■□□□ 1.47
CHD3-204ENST00000439235 LARP6Q9BRS8 491 aaKnown RBP24.26■■□□□ 1.47
CHD3-204ENST00000439235 KAT14Q9H8E8 782 aa24.26■■□□□ 1.47
CHD3-204ENST00000439235 SLC12A7Q9Y666 1083 aa24.26■■□□□ 1.47
CHD3-204ENST00000439235 GOLGA8BA8MQT2 603 aa24.25■■□□□ 1.47
CHD3-204ENST00000439235 TTLL1O95922 423 aa24.25■■□□□ 1.47
CHD3-204ENST00000439235 ICA1Q05084 483 aa24.25■■□□□ 1.47
CHD3-204ENST00000439235 SEPT2Q15019 361 aa24.25■■□□□ 1.47
CHD3-204ENST00000439235 RCSD1Q6JBY9 416 aa24.25■■□□□ 1.47
CHD3-204ENST00000439235 APOA5Q6Q788 366 aa24.25■■□□□ 1.47
CHD3-204ENST00000439235 CATIPQ7Z7H3 387 aa24.25■■□□□ 1.47
CHD3-204ENST00000439235 TMX3Q96JJ7 454 aa24.25■■□□□ 1.47
CHD3-204ENST00000439235 DAXXQ9UER7 740 aaPredicted RBP24.25■■□□□ 1.47
CHD3-204ENST00000439235 NAP1L2Q9ULW6 460 aaPredicted RBP24.25■■□□□ 1.47
CHD3-204ENST00000439235 TOP1P11387 765 aaKnown RBP24.24■■□□□ 1.47
CHD3-204ENST00000439235 RCAN1P53805 252 aa24.24■■□□□ 1.47
CHD3-204ENST00000439235 RAB3GAP1Q15042 981 aa24.24■■□□□ 1.47
CHD3-204ENST00000439235 DLK2Q6UY11 383 aa24.24■■□□□ 1.47
CHD3-204ENST00000439235 KLRG1Q96E93 195 aa24.24■■□□□ 1.47
CHD3-204ENST00000439235 SENP2Q9HC62 589 aa24.24■■□□□ 1.47
CHD3-204ENST00000439235 NYAP2Q9P242 653 aa24.24■■□□□ 1.47
CHD3-204ENST00000439235 BRPF3Q9ULD4 1205 aa24.24■■□□□ 1.47
CHD3-204ENST00000439235 DDAH1O94760 285 aa24.23■■□□□ 1.47
CHD3-204ENST00000439235 GUCY1A2P33402 732 aa24.23■■□□□ 1.47
CHD3-204ENST00000439235 IREB2P48200 963 aaKnown RBP24.23■■□□□ 1.47
CHD3-204ENST00000439235 SCYL3Q8IZE3 742 aa24.23■■□□□ 1.47
CHD3-204ENST00000439235 ZNF654Q8IZM8 581 aa24.23■■□□□ 1.47
CHD3-204ENST00000439235 CHMP4CQ96CF2 233 aa24.23■■□□□ 1.47
CHD3-204ENST00000439235 SLKQ9H2G2 1235 aaPredicted RBP24.23■■□□□ 1.47
CHD3-204ENST00000439235 POLR2AP24928 1970 aaKnown RBP24.23■■□□□ 1.47
CHD3-204ENST00000439235 ZBTB43O43298 467 aa24.22■■□□□ 1.47
CHD3-204ENST00000439235 USP2O75604 605 aaPredicted RBP24.22■■□□□ 1.47
CHD3-204ENST00000439235 CALM1P0DP23 149 aa24.22■■□□□ 1.47
CHD3-204ENST00000439235 CALM2P0DP24 149 aa24.22■■□□□ 1.47
CHD3-204ENST00000439235 CALM3P0DP25 149 aa24.22■■□□□ 1.47
CHD3-204ENST00000439235 PDIA3P30101 505 aaKnown RBP24.22■■□□□ 1.47
CHD3-204ENST00000439235 INPP5BP32019 993 aa24.22■■□□□ 1.47
CHD3-204ENST00000439235 JAG1P78504 1218 aa24.22■■□□□ 1.47
CHD3-204ENST00000439235 ME3Q16798 604 aa24.22■■□□□ 1.47
CHD3-204ENST00000439235 SHROOM1Q2M3G4 852 aaPredicted RBP24.22■■□□□ 1.47
CHD3-204ENST00000439235 NOL9Q5SY16 702 aaKnown RBP24.22■■□□□ 1.47
CHD3-204ENST00000439235 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.22■■□□□ 1.472e-6■□□□□ 10
CHD3-204ENST00000439235 TMEM47Q9BQJ4 181 aa24.22■■□□□ 1.47
CHD3-204ENST00000439235 ARHGEF10LQ9HCE6 1279 aa24.22■■□□□ 1.47
CHD3-204ENST00000439235 CLIP2Q9UDT6 1046 aa24.22■■□□□ 1.47
CHD3-204ENST00000439235 SYNPO2Q9UMS6 1093 aa24.22■■□□□ 1.47
CHD3-204ENST00000439235 LARGE1O95461 756 aa24.21■■□□□ 1.47
CHD3-204ENST00000439235 ATP2B2Q01814 1243 aa24.21■■□□□ 1.47
CHD3-204ENST00000439235 PRKG1Q13976 671 aa24.21■■□□□ 1.47
CHD3-204ENST00000439235 TTLL12Q14166 644 aaPredicted RBP24.21■■□□□ 1.47
CHD3-204ENST00000439235 ARMC9Q7Z3E5 817 aa24.21■■□□□ 1.47
CHD3-204ENST00000439235 CLEC10AQ8IUN9 316 aa24.21■■□□□ 1.47
CHD3-204ENST00000439235 PNMA1Q8ND90 353 aa24.21■■□□□ 1.47
CHD3-204ENST00000439235 IPO9Q96P70 1041 aaKnown RBP24.21■■□□□ 1.47
CHD3-204ENST00000439235 PICK1Q9NRD5 415 aa24.21■■□□□ 1.47
CHD3-204ENST00000439235 NID2Q14112 1375 aa24.2■■□□□ 1.46
CHD3-204ENST00000439235 DOCK1Q14185 1865 aa24.2■■□□□ 1.46
CHD3-204ENST00000439235 TRAF5O00463 557 aa24.2■■□□□ 1.46
CHD3-204ENST00000439235 PFKFB2O60825 505 aa24.2■■□□□ 1.46
CHD3-204ENST00000439235 EEF2P13639 858 aaKnown RBP24.2■■□□□ 1.46
CHD3-204ENST00000439235 HSPA6P17066 643 aa24.2■■□□□ 1.46
CHD3-204ENST00000439235 METAP2P50579 478 aaKnown RBP eCLIP24.2■■□□□ 1.46
CHD3-204ENST00000439235 MAP3K9P80192 1104 aa24.2■■□□□ 1.46
CHD3-204ENST00000439235 STK3Q13188 491 aa24.2■■□□□ 1.46
CHD3-204ENST00000439235 MAP3K11Q16584 847 aa24.2■■□□□ 1.46
CHD3-204ENST00000439235 MICU3Q86XE3 530 aa24.2■■□□□ 1.46
CHD3-204ENST00000439235 SH2D4AQ9H788 454 aa24.2■■□□□ 1.46
CHD3-204ENST00000439235 GOLGA8AA7E2F4 631 aa24.19■■□□□ 1.46
CHD3-204ENST00000439235 HSP90AA1P07900 732 aaKnown RBP24.19■■□□□ 1.46
CHD3-204ENST00000439235 CUL4AQ13619 759 aa24.19■■□□□ 1.46
CHD3-204ENST00000439235 NUP133Q8WUM0 1156 aa24.19■■□□□ 1.46
CHD3-204ENST00000439235 GTF3C6Q969F1 213 aa24.19■■□□□ 1.46
CHD3-204ENST00000439235 MKL1Q969V6 931 aa24.19■■□□□ 1.46
CHD3-204ENST00000439235 ZNF408Q9H9D4 720 aa24.19■■□□□ 1.46
CHD3-204ENST00000439235 FZD1Q9UP38 647 aa24.19■■□□□ 1.46
CHD3-204ENST00000439235 CSADQ9Y600 493 aa24.19■■□□□ 1.46
CHD3-204ENST00000439235 USP17L5A8MUK1 530 aa24.18■■□□□ 1.46
CHD3-204ENST00000439235 KIF3CO14782 793 aa24.18■■□□□ 1.46
CHD3-204ENST00000439235 DHX16O60231 1041 aaKnown RBP24.18■■□□□ 1.46
CHD3-204ENST00000439235 FKBP1BP68106 108 aa24.18■■□□□ 1.46
CHD3-204ENST00000439235 PPP2R5BQ15173 497 aa24.18■■□□□ 1.46
CHD3-204ENST00000439235 LRRC47Q8N1G4 583 aaKnown RBP24.18■■□□□ 1.46
CHD3-204ENST00000439235 ZKSCAN4Q969J2 545 aaPredicted RBP24.18■■□□□ 1.46
CHD3-204ENST00000439235 MAP3K14Q99558 947 aa24.18■■□□□ 1.46
CHD3-204ENST00000439235 MYL10Q9BUA6 226 aa24.18■■□□□ 1.46
CHD3-204ENST00000439235 AS3MTQ9HBK9 375 aa24.18■■□□□ 1.46
CHD3-204ENST00000439235 HPS5Q9UPZ3 1129 aa24.18■■□□□ 1.46
CHD3-204ENST00000439235 ATAD5Q96QE3 1844 aa24.17■■□□□ 1.46
CHD3-204ENST00000439235 PAPPA2Q9BXP8 1791 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms