RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 ZYXQ15942 572 aaKnown RBP15.89■□□□□ 0.13
LINC00399-201ENST00000439008 TTC22Q5TAA0 569 aa15.89■□□□□ 0.13
LINC00399-201ENST00000439008 OTOP1Q7RTM1 612 aa15.89■□□□□ 0.13
LINC00399-201ENST00000439008 TBC1D2Q9BYX2 928 aa15.89■□□□□ 0.13
LINC00399-201ENST00000439008 AS3MTQ9HBK9 375 aa15.89■□□□□ 0.13
LINC00399-201ENST00000439008 INCENPQ9NQS7 918 aa15.89■□□□□ 0.13
LINC00399-201ENST00000439008 HELLSQ9NRZ9 838 aa15.89■□□□□ 0.13
LINC00399-201ENST00000439008 SWAP70Q9UH65 585 aa15.89■□□□□ 0.13
LINC00399-201ENST00000439008 MPHOSPH10O00566 681 aaKnown RBP15.88■□□□□ 0.13
LINC00399-201ENST00000439008 TDO2P48775 406 aa15.88■□□□□ 0.13
LINC00399-201ENST00000439008 ASCC2Q9H1I8 757 aaPredicted RBP15.88■□□□□ 0.13
LINC00399-201ENST00000439008 SLC45A1Q9Y2W3 748 aa15.88■□□□□ 0.13
LINC00399-201ENST00000439008 MGAMO43451 1857 aa15.88■□□□□ 0.13
LINC00399-201ENST00000439008 PRDM1O75626 825 aa15.87■□□□□ 0.13
LINC00399-201ENST00000439008 CAPN15O75808 1086 aa15.87■□□□□ 0.13
LINC00399-201ENST00000439008 LACTBP83111 547 aaPredicted RBP15.87■□□□□ 0.13
LINC00399-201ENST00000439008 MCMDC2Q4G0Z9 681 aa15.87■□□□□ 0.13
LINC00399-201ENST00000439008 DDRGK1Q96HY6 314 aa15.87■□□□□ 0.13
LINC00399-201ENST00000439008 PARK7Q99497 189 aaKnown RBP15.87■□□□□ 0.13
LINC00399-201ENST00000439008 KIAA1683Q9H0B3 1180 aa15.87■□□□□ 0.13
LINC00399-201ENST00000439008 CABP5Q9NP86 173 aa15.87■□□□□ 0.13
LINC00399-201ENST00000439008 TRIM17Q9Y577 477 aa15.87■□□□□ 0.13
LINC00399-201ENST00000439008 RLFQ13129 1914 aa15.87■□□□□ 0.13
LINC00399-201ENST00000439008 C19orf81C9J6K1 198 aa15.86■□□□□ 0.13
LINC00399-201ENST00000439008 CTDSPL2Q05D32 466 aa15.86■□□□□ 0.13
LINC00399-201ENST00000439008 TMEM179Q6ZVK1 233 aa15.86■□□□□ 0.13
LINC00399-201ENST00000439008 TICAM2Q86XR7 235 aa15.86■□□□□ 0.13
LINC00399-201ENST00000439008 NKX2-3Q8TAU0 364 aa15.86■□□□□ 0.13
LINC00399-201ENST00000439008 ERO1AQ96HE7 468 aa15.86■□□□□ 0.13
LINC00399-201ENST00000439008 C12orf42Q96LP6 360 aa15.86■□□□□ 0.13
LINC00399-201ENST00000439008 P2RX7Q99572 595 aaKnown RBP15.86■□□□□ 0.13
LINC00399-201ENST00000439008 FGAP02671 866 aa15.85■□□□□ 0.13
LINC00399-201ENST00000439008 HSPD1P10809 573 aaKnown RBP15.85■□□□□ 0.13
LINC00399-201ENST00000439008 HOXA7P31268 230 aaPredicted RBP15.85■□□□□ 0.13
LINC00399-201ENST00000439008 PPARAQ07869 468 aa15.85■□□□□ 0.13
LINC00399-201ENST00000439008 ALX1Q15699 326 aa15.85■□□□□ 0.13
LINC00399-201ENST00000439008 USP17L2Q6R6M4 530 aa15.85■□□□□ 0.13
LINC00399-201ENST00000439008 CWC27Q6UX04 472 aaKnown RBP15.85■□□□□ 0.13
LINC00399-201ENST00000439008 AMOTL1Q8IY63 956 aa15.85■□□□□ 0.13
LINC00399-201ENST00000439008 TRIM47Q96LD4 638 aa15.85■□□□□ 0.13
LINC00399-201ENST00000439008 CCDC17Q96LX7 622 aa15.85■□□□□ 0.13
LINC00399-201ENST00000439008 NBPF3Q9H094 633 aa15.85■□□□□ 0.13
LINC00399-201ENST00000439008 NAPBQ9H115 298 aa15.85■□□□□ 0.13
LINC00399-201ENST00000439008 TAOK2Q9UL54 1235 aa15.85■□□□□ 0.13
LINC00399-201ENST00000439008 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.85■□□□□ 0.13
LINC00399-201ENST00000439008 CCDC171Q6TFL3 1326 aa15.85■□□□□ 0.13
LINC00399-201ENST00000439008 IGKV6D-41A0A0C4DH26 115 aa15.84■□□□□ 0.13
LINC00399-201ENST00000439008 EEF2P13639 858 aaKnown RBP15.84■□□□□ 0.13
LINC00399-201ENST00000439008 VCAM1P19320 739 aa15.84■□□□□ 0.13
LINC00399-201ENST00000439008 EFCC1Q9HA90 598 aa15.84■□□□□ 0.13
LINC00399-201ENST00000439008 TXNRD2Q9NNW7 524 aa15.84■□□□□ 0.13
LINC00399-201ENST00000439008 TMOD4Q9NZQ9 345 aa15.84■□□□□ 0.13
LINC00399-201ENST00000439008 HPS5Q9UPZ3 1129 aa15.84■□□□□ 0.13
LINC00399-201ENST00000439008 BRCA2P51587 3418 aa15.84■□□□□ 0.13
LINC00399-201ENST00000439008 PARP14Q460N5 1801 aa15.83■□□□□ 0.12
LINC00399-201ENST00000439008 ICA1Q05084 483 aa15.83■□□□□ 0.12
LINC00399-201ENST00000439008 FBXO46Q6PJ61 603 aaPredicted RBP15.83■□□□□ 0.12
LINC00399-201ENST00000439008 ANKRD13CQ8N6S4 541 aa15.83■□□□□ 0.12
LINC00399-201ENST00000439008 FEZ1Q99689 392 aa15.83■□□□□ 0.12
LINC00399-201ENST00000439008 NACAP1Q9BZK3 213 aa15.83■□□□□ 0.12
LINC00399-201ENST00000439008 PTPN22Q9Y2R2 807 aa15.83■□□□□ 0.12
LINC00399-201ENST00000439008 TMX2Q9Y320 296 aa15.83■□□□□ 0.12
LINC00399-201ENST00000439008 MYH4Q9Y623 1939 aa15.83■□□□□ 0.12
LINC00399-201ENST00000439008 PSMC4P43686 418 aa15.82■□□□□ 0.12
LINC00399-201ENST00000439008 FAM47AQ5JRC9 791 aa15.82■□□□□ 0.12
LINC00399-201ENST00000439008 CATSPERGQ6ZRH7 1159 aa15.82■□□□□ 0.12
LINC00399-201ENST00000439008 CENPQQ7L2Z9 268 aaPredicted RBP15.82■□□□□ 0.12
LINC00399-201ENST00000439008 SMCR8Q8TEV9 937 aaPredicted RBP15.82■□□□□ 0.12
LINC00399-201ENST00000439008 MKNK2Q9HBH9 465 aa15.82■□□□□ 0.12
LINC00399-201ENST00000439008 DIAPH3Q9NSV4 1193 aa15.82■□□□□ 0.12
LINC00399-201ENST00000439008 RBPJLQ9UBG7 517 aa15.82■□□□□ 0.12
LINC00399-201ENST00000439008 ANAPC4Q9UJX5 808 aa15.82■□□□□ 0.12
LINC00399-201ENST00000439008 PLXNB2O15031 1838 aa15.81■□□□□ 0.12
LINC00399-201ENST00000439008 CNMDO75829 334 aa15.81■□□□□ 0.12
LINC00399-201ENST00000439008 OSBPP22059 807 aa15.81■□□□□ 0.12
LINC00399-201ENST00000439008 CHMLP26374 656 aa15.81■□□□□ 0.12
LINC00399-201ENST00000439008 HAND2P61296 217 aa15.81■□□□□ 0.12
LINC00399-201ENST00000439008 HERVK_113P62684 666 aa15.81■□□□□ 0.12
LINC00399-201ENST00000439008 PKN2Q16513 984 aaKnown RBP15.81■□□□□ 0.12
LINC00399-201ENST00000439008 Q3C1V9 767 aa15.81■□□□□ 0.12
LINC00399-201ENST00000439008 SPICE1Q8N0Z3 855 aa15.81■□□□□ 0.12
LINC00399-201ENST00000439008 RPAP3Q9H6T3 665 aaPredicted RBP15.81■□□□□ 0.12
LINC00399-201ENST00000439008 PTCH2Q9Y6C5 1203 aa15.81■□□□□ 0.12
LINC00399-201ENST00000439008 LAMA4Q16363 1823 aa15.8■□□□□ 0.12
LINC00399-201ENST00000439008 FGRP09769 529 aa15.8■□□□□ 0.12
LINC00399-201ENST00000439008 USP14P54578 494 aa15.8■□□□□ 0.12
LINC00399-201ENST00000439008 IRX3P78415 501 aaPredicted RBP15.8■□□□□ 0.12
LINC00399-201ENST00000439008 ATP2B2Q01814 1243 aa15.8■□□□□ 0.12
LINC00399-201ENST00000439008 FAM110CQ1W6H9 321 aa15.8■□□□□ 0.12
LINC00399-201ENST00000439008 TBC1D10CQ8IV04 446 aa15.8■□□□□ 0.12
LINC00399-201ENST00000439008 CEP95Q96GE4 821 aa15.8■□□□□ 0.12
LINC00399-201ENST00000439008 VCPKMTQ9H867 229 aa15.8■□□□□ 0.12
LINC00399-201ENST00000439008 KANSL2Q9H9L4 492 aa15.8■□□□□ 0.12
LINC00399-201ENST00000439008 MORF4L1Q9UBU8 362 aa15.8■□□□□ 0.12
LINC00399-201ENST00000439008 PNMA3Q9UL41 463 aa15.8■□□□□ 0.12
LINC00399-201ENST00000439008 GABRQQ9UN88 632 aa15.8■□□□□ 0.12
LINC00399-201ENST00000439008 PLIN4Q96Q06 1357 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 ZMYM6O95789 1325 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 CCDC85CA6NKD9 419 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 USP17L15C9J2P7 530 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms