RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TRIM49BA6NDI0 452 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 GOLGA6CA6NDK9 693 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 POTEB2H3BUK9 544 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 AGPSO00116 658 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 ZEB2O60315 1214 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 GOLGA6DP0CG33 693 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 TDO2P48775 406 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 CASP7P55210 303 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 JADE2Q9NQC1 790 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 GOLGA6AQ9NYA3 693 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 SLC12A7Q9Y666 1083 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 SARSP49591 514 aaKnown RBP15.11■□□□□ 0.01
ACTN1-204ENST00000438964 GNGT1P63211 74 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 PIP4K2BP78356 416 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 CCDC122Q5T0U0 273 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 SND1Q7KZF4 910 aaKnown RBP eCLIP15.11■□□□□ 0.015e-7■□□□□ 8.3
ACTN1-204ENST00000438964 AIDAQ96BJ3 306 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 GEMIN8Q9NWZ8 242 aaKnown RBP15.11■□□□□ 0.01
ACTN1-204ENST00000438964 HEG1Q9ULI3 1381 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 IL15P40933 162 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-204ENST00000438964 ZNF174Q15697 407 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 FILIP1LQ4L180 1135 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 RRAGBQ5VZM2 374 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 KCNV1Q6PIU1 500 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 MMS22LQ6ZRQ5 1243 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 PLIN2Q99541 437 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 TACC3Q9Y6A5 838 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 RCCD1A6NED2 376 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 PTPREP23469 700 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 HNRNPH1P31943 449 aaKnown RBP15.11■□□□□ 0.01
ACTN1-204ENST00000438964 IRAK1P51617 712 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 AMPD2Q01433 879 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 UBXN1Q04323 297 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 SF3A3Q12874 501 aaKnown RBP eCLIP15.11■□□□□ 0.014e-7■■■■■ 34.5
ACTN1-204ENST00000438964 PDCLQ13371 301 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 MAP9Q49MG5 647 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 CT47A1Q5JQC4 288 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-204ENST00000438964 SPATA1Q5VX52 437 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 EFCAB13Q8IY85 973 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 HELBQ8NG08 1087 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-204ENST00000438964 FAM76AQ8TAV0 307 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 SYMPKQ92797 1274 aaKnown RBP15.11■□□□□ 0.01
ACTN1-204ENST00000438964 ACBD3Q9H3P7 528 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 SLC52A2Q9HAB3 445 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 ZSWIM5Q9P217 1185 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 DACH1Q9UI36 760 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 DIP2AQ14689 1571 aa15.11■□□□□ 0.01
ACTN1-204ENST00000438964 NWD2Q9ULI1 1742 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 KLK7P49862 253 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 USP14P54578 494 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 SAFBQ15424 915 aaKnown RBP eCLIP15.1■□□□□ 0.01
ACTN1-204ENST00000438964 WHAMMP3Q1A5X7 153 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 LRP10Q7Z4F1 713 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 APPBP2Q92624 585 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 FAM89AQ96GI7 184 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 ORAI2Q96SN7 254 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 JPH2Q9BR39 696 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-204ENST00000438964 GBP3Q9H0R5 595 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 MED4Q9NPJ6 270 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.1■□□□□ 0.01
ACTN1-204ENST00000438964 COG1Q8WTW3 980 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 PAGE5Q96GU1 130 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 LACRTQ9GZZ8 138 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 LY9Q9HBG7 655 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 TTF2Q9UNY4 1162 aaKnown RBP15.1■□□□□ 0.01
ACTN1-204ENST00000438964 GDAQ9Y2T3 454 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 CAPN7Q9Y6W3 813 aa15.1■□□□□ 0.01
ACTN1-204ENST00000438964 NBPF26B4DH59 902 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 EBAG9O00559 213 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-204ENST00000438964 MCAMP43121 646 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 NBPF14Q5TI25 921 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 MCTP2Q6DN12 878 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 NBPF10Q6P3W6 841 aaKnown RBP15.09■□□□□ 0.01
ACTN1-204ENST00000438964 CNGA4Q8IV77 575 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 NBPF15Q8N660 670 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 CENPHQ9H3R5 247 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 ZC3H4Q9UPT8 1303 aaKnown RBP15.09■□□□□ 0.01
ACTN1-204ENST00000438964 MED1Q15648 1581 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-204ENST00000438964 LTN1O94822 1766 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 GOLGA6BA6NDN3 693 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 H0YHG0 523 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 PRKAB2O43741 272 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 RPS6KA5O75582 802 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 CDKL5O76039 1030 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 RAPGEF4Q8WZA2 1011 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 JAKMIP2Q96AA8 810 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 ARL8AQ96BM9 186 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 SAR1BQ9Y6B6 198 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 EPN1Q9Y6I3 576 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-204ENST00000438964 A0A087WUV0 522 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-204ENST00000438964 TTC26A0AVF1 554 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 PPP1R3GB7ZBB8 358 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 MMP1P03956 469 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 SNRPA1P09661 255 aaKnown RBP15.09■□□□□ 0.01
ACTN1-204ENST00000438964 PBX1P40424 430 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 CUL4BQ13620 913 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 KIAA1328Q86T90 577 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 IGDCC4Q8TDY8 1250 aa15.09■□□□□ 0.01
ACTN1-204ENST00000438964 CPDO75976 1380 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms