RNA–Protein interactions for RNA: ENST00000438610.5

MTA1-208, Transcript of metastasis associated 1, humanhuman

TSL 1 (best)

Gene MTA1, Length 2,144 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-208ENST00000438610 CRACR2BQ8N4Y2 399 aaPredicted RBP21.58■■□□□ 1.04
MTA1-208ENST00000438610 PPFIA3O75145 1194 aa21.57■■□□□ 1.04
MTA1-208ENST00000438610 GMPSP49915 693 aaPredicted RBP21.57■■□□□ 1.04
MTA1-208ENST00000438610 PNMA1Q8ND90 353 aa21.57■■□□□ 1.04
MTA1-208ENST00000438610 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.57■■□□□ 1.04
MTA1-208ENST00000438610 CLRN2A0PK11 232 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 WNT10BO00744 389 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 KLHL40Q2TBA0 621 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 FAM83AQ86UY5 434 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 TRIM22Q8IYM9 498 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 CTCFLQ8NI51 663 aaPredicted RBP21.56■■□□□ 1.04
MTA1-208ENST00000438610 PHKBQ93100 1093 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 TMEM47Q9BQJ4 181 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 ZSCAN16Q9H4T2 348 aaPredicted RBP21.56■■□□□ 1.04
MTA1-208ENST00000438610 GJA3Q9Y6H8 435 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 IGKV6D-41A0A0C4DH26 115 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 TCP10L2B9ZVM9 353 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 AKR1B1P15121 316 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 NBPF11Q86T75 865 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 WASF1Q92558 559 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 CEP95Q96GE4 821 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 C8orf76Q96K31 380 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 STX8Q9UNK0 236 aa21.56■■□□□ 1.04
MTA1-208ENST00000438610 PRPF40AO75400 957 aaKnown RBP21.55■■□□□ 1.04
MTA1-208ENST00000438610 KIF5BP33176 963 aa21.55■■□□□ 1.04
MTA1-208ENST00000438610 TATDN1Q6P1N9 297 aa21.55■■□□□ 1.04
MTA1-208ENST00000438610 FBXO18Q8NFZ0 1043 aa21.55■■□□□ 1.04
MTA1-208ENST00000438610 SLC26A6Q9BXS9 759 aa21.55■■□□□ 1.04
MTA1-208ENST00000438610 TRIM34Q9BYJ4 488 aa21.55■■□□□ 1.04
MTA1-208ENST00000438610 DNAJC18Q9H819 358 aa21.55■■□□□ 1.04
MTA1-208ENST00000438610 MTMR4Q9NYA4 1195 aa21.55■■□□□ 1.04
MTA1-208ENST00000438610 CNOT7Q9UIV1 285 aaKnown RBP21.55■■□□□ 1.04
MTA1-208ENST00000438610 DDX49Q9Y6V7 483 aaKnown RBP21.55■■□□□ 1.04
MTA1-208ENST00000438610 TOP1P11387 765 aaKnown RBP21.55■■□□□ 1.04
MTA1-208ENST00000438610 PPP4R3BQ5MIZ7 849 aa21.55■■□□□ 1.04
MTA1-208ENST00000438610 NBPF9Q3BBW0 867 aa21.54■■□□□ 1.04
MTA1-208ENST00000438610 ALG1Q9BT22 464 aa21.54■■□□□ 1.04
MTA1-208ENST00000438610 RNF26Q9BY78 433 aaPredicted RBP21.54■■□□□ 1.04
MTA1-208ENST00000438610 DICER1Q9UPY3 1922 aaKnown RBP21.54■■□□□ 1.04
MTA1-208ENST00000438610 ZNF541Q9H0D2 1346 aa21.54■■□□□ 1.04
MTA1-208ENST00000438610 SHTN1A0MZ66 631 aa21.53■■□□□ 1.04
MTA1-208ENST00000438610 FUT2Q10981 343 aa21.53■■□□□ 1.04
MTA1-208ENST00000438610 TMTC3Q6ZXV5 915 aa21.53■■□□□ 1.04
MTA1-208ENST00000438610 FERMT3Q86UX7 667 aa21.53■■□□□ 1.04
MTA1-208ENST00000438610 MICALL2Q8IY33 904 aa21.53■■□□□ 1.04
MTA1-208ENST00000438610 CSRNP1Q96S65 589 aa21.53■■□□□ 1.04
MTA1-208ENST00000438610 VEZTQ9HBM0 779 aa21.53■■□□□ 1.04
MTA1-208ENST00000438610 HERC5Q9UII4 1024 aaKnown RBP21.53■■□□□ 1.04
MTA1-208ENST00000438610 SIPA1L1O43166 1804 aa21.53■■□□□ 1.04
MTA1-208ENST00000438610 MYH8P13535 1937 aa21.53■■□□□ 1.04
MTA1-208ENST00000438610 CNTNAP1P78357 1384 aa21.53■■□□□ 1.04
MTA1-208ENST00000438610 DEXIO95424 95 aa21.53■■□□□ 1.04
MTA1-208ENST00000438610 RESTQ13127 1097 aa21.53■■□□□ 1.04
MTA1-208ENST00000438610 CERKLQ49MI3 558 aaPredicted RBP21.53■■□□□ 1.04
MTA1-208ENST00000438610 GNAQP50148 359 aa21.52■■□□□ 1.04
MTA1-208ENST00000438610 GRM4Q14833 912 aa21.52■■□□□ 1.04
MTA1-208ENST00000438610 GPC2Q8N158 579 aa21.52■■□□□ 1.04
MTA1-208ENST00000438610 CHAMP1Q96JM3 812 aa21.52■■□□□ 1.04
MTA1-208ENST00000438610 PRPF3O43395 683 aaKnown RBP21.52■■□□□ 1.03
MTA1-208ENST00000438610 FOXD4L6Q3SYB3 417 aaPredicted RBP21.52■■□□□ 1.03
MTA1-208ENST00000438610 FOXD4L3Q6VB84 417 aaPredicted RBP21.52■■□□□ 1.03
MTA1-208ENST00000438610 TTLL1O95922 423 aa21.51■■□□□ 1.03
MTA1-208ENST00000438610 AKAP17AQ02040 695 aaKnown RBP21.51■■□□□ 1.03
MTA1-208ENST00000438610 CMTR1Q8N1G2 835 aaKnown RBP21.51■■□□□ 1.03
MTA1-208ENST00000438610 CCDC82Q8N4S0 544 aa21.51■■□□□ 1.03
MTA1-208ENST00000438610 TMEM87AQ8NBN3 555 aa21.51■■□□□ 1.03
MTA1-208ENST00000438610 SBF1O95248 1867 aa21.51■■□□□ 1.03
MTA1-208ENST00000438610 H7C1D1 291 aa21.5■■□□□ 1.03
MTA1-208ENST00000438610 PLEKHA8P1O95397 391 aa21.5■■□□□ 1.03
MTA1-208ENST00000438610 YBX3P16989 372 aaKnown RBP eCLIP21.5■■□□□ 1.031e-7■■□□□ 12.6
MTA1-208ENST00000438610 TNNI2P48788 182 aa21.5■■□□□ 1.03
MTA1-208ENST00000438610 GZF1Q9H116 711 aaPredicted RBP21.5■■□□□ 1.03
MTA1-208ENST00000438610 TBC1D12O60347 775 aa21.5■■□□□ 1.03
MTA1-208ENST00000438610 SLURP2P0DP57 97 aa21.5■■□□□ 1.03
MTA1-208ENST00000438610 FOSBP53539 338 aa21.5■■□□□ 1.03
MTA1-208ENST00000438610 GUCY1B3Q02153 619 aa21.5■■□□□ 1.03
MTA1-208ENST00000438610 CSPP1Q1MSJ5 1256 aa21.5■■□□□ 1.03
MTA1-208ENST00000438610 RBM26Q5T8P6 1007 aaKnown RBP21.5■■□□□ 1.03
MTA1-208ENST00000438610 SRBD1Q8N5C6 995 aaKnown RBP21.5■■□□□ 1.03
MTA1-208ENST00000438610 LZTS2Q9BRK4 669 aa21.5■■□□□ 1.03
MTA1-208ENST00000438610 MPHOSPH10O00566 681 aaKnown RBP21.49■■□□□ 1.03
MTA1-208ENST00000438610 MBD3O95983 291 aa21.49■■□□□ 1.03
MTA1-208ENST00000438610 DNM1Q05193 864 aaKnown RBP21.49■■□□□ 1.03
MTA1-208ENST00000438610 TNFAIP1Q13829 316 aa21.49■■□□□ 1.03
MTA1-208ENST00000438610 TRIM29Q14134 588 aa21.49■■□□□ 1.03
MTA1-208ENST00000438610 AIFM3Q96NN9 605 aa21.49■■□□□ 1.03
MTA1-208ENST00000438610 PGAP2Q9UHJ9 254 aa21.49■■□□□ 1.03
MTA1-208ENST00000438610 MAD2L2Q9UI95 211 aa21.49■■□□□ 1.03
MTA1-208ENST00000438610 PALM3A6NDB9 673 aaPredicted RBP21.49■■□□□ 1.03
MTA1-208ENST00000438610 FAM196BA6NMK8 535 aa21.49■■□□□ 1.03
MTA1-208ENST00000438610 EGFRP00533 1210 aa21.49■■□□□ 1.03
MTA1-208ENST00000438610 OTUD7BQ6GQQ9 843 aa21.49■■□□□ 1.03
MTA1-208ENST00000438610 SAMD7Q7Z3H4 446 aa21.49■■□□□ 1.03
MTA1-208ENST00000438610 KANSL2Q9H9L4 492 aa21.49■■□□□ 1.03
MTA1-208ENST00000438610 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.49■■□□□ 1.037e-7■■■■□ 19.6
MTA1-208ENST00000438610 RBM27Q9P2N5 1060 aaKnown RBP21.49■■□□□ 1.03
MTA1-208ENST00000438610 GREB1LQ9C091 1923 aaPredicted RBP21.48■■□□□ 1.03
MTA1-208ENST00000438610 NCLP19338 710 aaKnown RBP21.48■■□□□ 1.03
MTA1-208ENST00000438610 GUCY1A2P33402 732 aa21.48■■□□□ 1.03
MTA1-208ENST00000438610 KRT40Q6A162 431 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms