RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 USP5P45974 858 aa10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 PLCD1P51178 756 aa10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 HDAC1Q13547 482 aaPredicted RBP10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 HIC1Q14526 733 aa10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 OTOP1Q7RTM1 612 aa10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 ANKRD23Q86SG2 305 aa10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 CCDC97Q96F63 343 aaPredicted RBP10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 ARHGAP39Q9C0H5 1083 aa10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 PUS7LQ9H0K6 701 aaKnown RBP10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 ZCCHC17Q9NP64 241 aaKnown RBP10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 RBBP6Q7Z6E9 1792 aaKnown RBP10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 GRXCR2A6NFK2 248 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 TLR2O60603 784 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 IGHDP01880 384 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 CYP2C8P10632 490 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 SHMT1P34896 483 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 SP3Q02447 781 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 GABPAQ06546 454 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 SPP2Q13103 211 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 DSG2Q14126 1118 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 UBE3CQ15386 1083 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 TREML2Q5T2D2 321 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 CERS3Q8IU89 383 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 FOXP4Q8IVH2 680 aaPredicted RBP10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 KBTBD3Q8NAB2 608 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 CRNKL1Q9BZJ0 848 aaKnown RBP10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 ZFYVE28Q9HCC9 887 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 DCP1AQ9NPI6 582 aaPredicted RBP10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 ZBTB21Q9ULJ3 1066 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 PLXNB2O15031 1838 aa10.32□□□□□ -0.76
HERPUD2-206ENST00000438224 MYH4Q9Y623 1939 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 CYP2D7A0A087X1C5 515 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 CCDC85CA6NKD9 419 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 GUCY1A2P33402 732 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 IRX6P78412 446 aaPredicted RBP10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 ANKRD45Q5TZF3 282 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 TATDN1Q6P1N9 297 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 C17orf99Q6UX52 265 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 GADL1Q6ZQY3 521 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 SMC5Q8IY18 1101 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 CRACR2BQ8N4Y2 399 aaPredicted RBP10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 SLC44A5Q8NCS7 719 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 OSBP2Q969R2 916 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 EHD4Q9H223 541 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 MCM9Q9NXL9 1143 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 CPA4Q9UI42 421 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 SERPINB13Q9UIV8 391 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 HPS5Q9UPZ3 1129 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 TRIM17Q9Y577 477 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 TTC41PQ6P2S7 1318 aa10.31□□□□□ -0.76
HERPUD2-206ENST00000438224 USP17L5A8MUK1 530 aa10.3□□□□□ -0.76
HERPUD2-206ENST00000438224 GH2P01242 217 aa10.3□□□□□ -0.76
HERPUD2-206ENST00000438224 HLA-DOAP06340 250 aa10.3□□□□□ -0.76
HERPUD2-206ENST00000438224 BCRP11274 1271 aa10.3□□□□□ -0.76
HERPUD2-206ENST00000438224 MX1P20591 662 aa10.3□□□□□ -0.76
HERPUD2-206ENST00000438224 HMGCS2P54868 508 aa10.3□□□□□ -0.76
HERPUD2-206ENST00000438224 SH3D19Q5HYK7 790 aa10.3□□□□□ -0.76
HERPUD2-206ENST00000438224 FBXO46Q6PJ61 603 aaPredicted RBP10.3□□□□□ -0.76
HERPUD2-206ENST00000438224 ZNF280CQ8ND82 737 aa10.3□□□□□ -0.76
HERPUD2-206ENST00000438224 DYNLL2Q96FJ2 89 aa10.3□□□□□ -0.76
HERPUD2-206ENST00000438224 ERO1AQ96HE7 468 aa10.3□□□□□ -0.76
HERPUD2-206ENST00000438224 GPATCH3Q96I76 525 aa10.3□□□□□ -0.76
HERPUD2-206ENST00000438224 WDR18Q9BV38 432 aa10.3□□□□□ -0.76
HERPUD2-206ENST00000438224 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.3□□□□□ -0.76
HERPUD2-206ENST00000438224 COL11A1P12107 1806 aaPredicted RBP10.29□□□□□ -0.76
HERPUD2-206ENST00000438224 M0R2C6 588 aa10.29□□□□□ -0.76
HERPUD2-206ENST00000438224 ASNSP08243 561 aa10.29□□□□□ -0.76
HERPUD2-206ENST00000438224 PDE1AP54750 535 aa10.29□□□□□ -0.76
HERPUD2-206ENST00000438224 LACTBP83111 547 aaPredicted RBP10.29□□□□□ -0.76
HERPUD2-206ENST00000438224 MTMR2Q13614 643 aa10.29□□□□□ -0.76
HERPUD2-206ENST00000438224 TTC6Q86TZ1 520 aa10.29□□□□□ -0.76
HERPUD2-206ENST00000438224 GCC1Q96CN9 775 aa10.29□□□□□ -0.76
HERPUD2-206ENST00000438224 PHF12Q96QT6 1004 aa10.29□□□□□ -0.76
HERPUD2-206ENST00000438224 STRBPQ96SI9 672 aaKnown RBP10.29□□□□□ -0.76
HERPUD2-206ENST00000438224 SEC62Q99442 399 aaKnown RBP10.29□□□□□ -0.76
HERPUD2-206ENST00000438224 EPB41L4AQ9HCS5 686 aaPredicted RBP10.29□□□□□ -0.76
HERPUD2-206ENST00000438224 PCDH10Q9P2E7 1040 aa10.29□□□□□ -0.76
HERPUD2-206ENST00000438224 STAP2Q9UGK3 403 aa10.29□□□□□ -0.76
HERPUD2-206ENST00000438224 AGTPBP1Q9UPW5 1226 aa10.29□□□□□ -0.76
HERPUD2-206ENST00000438224 A0A0G2JMZ2 1700 aa10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 GSG1L2A8MUP6 293 aa10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 RNF113AO15541 343 aaKnown RBP10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 GLRX3O76003 335 aaKnown RBP10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 POLR3DP05423 398 aaPredicted RBP10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 SOX10P56693 466 aa10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 AAMPQ13685 434 aa10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 PKN2Q16513 984 aaKnown RBP10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 C12orf60Q5U649 245 aa10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 POTEEQ6S8J3 1075 aa10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 FASTKD5Q7L8L6 764 aaKnown RBP10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 CLEC10AQ8IUN9 316 aa10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 PROCA1Q8NCQ7 364 aaPredicted RBP10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 ACER1Q8TDN7 264 aa10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 APPBP2Q92624 585 aa10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 TRIM47Q96LD4 638 aa10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 PARK7Q99497 189 aaKnown RBP10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 TMEM106CQ9BVX2 250 aa10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 TRIM34Q9BYJ4 488 aa10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 LNPKQ9C0E8 428 aa10.28□□□□□ -0.76
HERPUD2-206ENST00000438224 EFCC1Q9HA90 598 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms