RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 AK2P54819 239 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 STX17P56962 302 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 CDAN1Q8IWY9 1227 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 TMOD3Q9NYL9 352 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 COPG1Q9Y678 874 aaKnown RBP12.7□□□□□ -0.38
PTCH1-209ENST00000437951 NCOA1Q15788 1441 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 FNBP1Q96RU3 617 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 KCNH3Q9ULD8 1083 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 PRXQ9BXM0 1461 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 YWHAEP62258 255 aaKnown RBP12.7□□□□□ -0.38
PTCH1-209ENST00000437951 ARHGEF18Q6ZSZ5 1173 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 PPP1R42Q7Z4L9 355 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 TMOD4Q9NZQ9 345 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 PAIP2BQ9ULR5 123 aaKnown RBP12.7□□□□□ -0.38
PTCH1-209ENST00000437951 RAD54L2Q9Y4B4 1467 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 PTPDC1A2A3K4 754 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 CCT5P48643 541 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 ALS2CLQ60I27 953 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 CSGALNACT2Q8N6G5 542 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 RHPN1Q8TCX5 695 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 ZMYM3Q14202 1370 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 ARHGAP10A1A4S6 786 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 DAPK3O43293 454 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 MAGEA1P43355 309 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 CDR2Q01850 454 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 PPP2R5BQ15173 497 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 JADE1Q6IE81 842 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 LARP6Q9BRS8 491 aaKnown RBP12.7□□□□□ -0.38
PTCH1-209ENST00000437951 PHLPP2Q6ZVD8 1323 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 RUSC2Q8N2Y8 1516 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 RPSAP08865 295 aaKnown RBP12.7□□□□□ -0.38
PTCH1-209ENST00000437951 APOBRQ0VD83 1088 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 VAT1LQ9HCJ6 419 aa12.7□□□□□ -0.38
PTCH1-209ENST00000437951 KRT80Q6KB66 452 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 KLHL7Q8IXQ5 586 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 MGARPQ8TDB4 240 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 RSAD2Q8WXG1 361 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 THAP12O43422 761 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 GUCY2CP25092 1073 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 TAF12Q16514 161 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 LONRF2Q1L5Z9 754 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 POLR3CQ9BUI4 534 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-209ENST00000437951 EIF2AK4Q9P2K8 1649 aaKnown RBP12.69□□□□□ -0.38
PTCH1-209ENST00000437951 AOX1Q06278 1338 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 EPHB4P54760 987 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 SRRM1Q8IYB3 904 aaKnown RBP12.69□□□□□ -0.38
PTCH1-209ENST00000437951 ARMC2Q8NEN0 867 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 DKC1O60832 514 aaKnown RBP eCLIP12.69□□□□□ -0.38
PTCH1-209ENST00000437951 ANKRD44Q8N8A2 993 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 PASKQ96RG2 1323 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 IGHDP01880 384 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 IFT88Q13099 833 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 SPC25Q9HBM1 224 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 MRFAP1Q9Y605 127 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 MAD1L1Q9Y6D9 718 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 CHUKO15111 745 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 ATP6V0A1Q93050 837 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 MRPL40Q9NQ50 206 aaKnown RBP12.69□□□□□ -0.38
PTCH1-209ENST00000437951 DIABLOQ9NR28 239 aa12.69□□□□□ -0.38
PTCH1-209ENST00000437951 FRMD3A2A2Y4 597 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 PLCG2P16885 1265 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 ST5P78524 1137 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 LCA5Q86VQ0 697 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 GRM1Q13255 1194 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 TTC16Q8NEE8 873 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 TRIM56Q9BRZ2 755 aaKnown RBP12.68□□□□□ -0.38
PTCH1-209ENST00000437951 PYGBP11216 843 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 HAND2P61296 217 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 ANKRD42Q8N9B4 389 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 HAUS4Q9H6D7 363 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 INTS9Q9NV88 658 aaKnown RBP12.68□□□□□ -0.38
PTCH1-209ENST00000437951 ANO1Q5XXA6 986 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 CREB3L3Q68CJ9 461 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 IPO11Q9UI26 975 aaKnown RBP12.68□□□□□ -0.38
PTCH1-209ENST00000437951 HMGXB3Q12766 1538 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 ASXL1Q8IXJ9 1541 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 KRIT1O00522 736 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 KRT9P35527 623 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 CASC4Q6P4E1 433 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 CSRNP1Q96S65 589 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 PDE6BP35913 854 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 TEKT1Q969V4 418 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 TRIM31Q9BZY9 425 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 SOS1Q07889 1333 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-209ENST00000437951 HDAC4P56524 1084 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 KLHL30Q0D2K2 578 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 NXNQ6DKJ4 435 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 RNF14Q9UBS8 474 aa12.68□□□□□ -0.38
PTCH1-209ENST00000437951 KDM2BQ8NHM5 1336 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 CDKL2Q92772 493 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 TROQ12816 1431 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-209ENST00000437951 DEXIO95424 95 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 EIF3BP55884 814 aaKnown RBP12.67□□□□□ -0.38
PTCH1-209ENST00000437951 PDE4DQ08499 809 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 STX8Q9UNK0 236 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 MAP3K2Q9Y2U5 619 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 NOC2LQ9Y3T9 749 aaKnown RBP12.67□□□□□ -0.38
PTCH1-209ENST00000437951 ARAP1Q96P48 1450 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 CCDC159P0C7I6 412 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 SCYL3Q8IZE3 742 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms