RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 DCP1AQ9NPI6 582 aaPredicted RBP17.39■□□□□ 0.37
LINC01006-204ENST00000435354 MCM9Q9NXL9 1143 aa17.39■□□□□ 0.37
LINC01006-204ENST00000435354 HMGCRP04035 888 aa17.38■□□□□ 0.37
LINC01006-204ENST00000435354 ADD2P35612 726 aa17.38■□□□□ 0.37
LINC01006-204ENST00000435354 TRIM32Q13049 653 aa17.38■□□□□ 0.37
LINC01006-204ENST00000435354 Q3C1V9 767 aa17.38■□□□□ 0.37
LINC01006-204ENST00000435354 CRISPLD2Q9H0B8 497 aa17.38■□□□□ 0.37
LINC01006-204ENST00000435354 PORCNQ9H237 461 aa17.38■□□□□ 0.37
LINC01006-204ENST00000435354 TRIOBPQ9H2D6 2365 aa17.37■□□□□ 0.37
LINC01006-204ENST00000435354 PRKAB2O43741 272 aa17.37■□□□□ 0.37
LINC01006-204ENST00000435354 SMARCA5O60264 1052 aaPredicted RBP17.37■□□□□ 0.37
LINC01006-204ENST00000435354 MBD4O95243 580 aa17.37■□□□□ 0.37
LINC01006-204ENST00000435354 VCAM1P19320 739 aa17.37■□□□□ 0.37
LINC01006-204ENST00000435354 ERVK-9P63128 1117 aa17.37■□□□□ 0.37
LINC01006-204ENST00000435354 ERVK-24P63145 666 aa17.37■□□□□ 0.37
LINC01006-204ENST00000435354 SEPT2Q15019 361 aa17.37■□□□□ 0.37
LINC01006-204ENST00000435354 SLC44A5Q8NCS7 719 aa17.37■□□□□ 0.37
LINC01006-204ENST00000435354 TRIB2Q92519 343 aa17.37■□□□□ 0.37
LINC01006-204ENST00000435354 PAGR1Q9BTK6 254 aa17.37■□□□□ 0.37
LINC01006-204ENST00000435354 LRRCC1Q9C099 1032 aa17.37■□□□□ 0.37
LINC01006-204ENST00000435354 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.37■□□□□ 0.37
LINC01006-204ENST00000435354 COLQQ9Y215 455 aaPredicted RBP17.37■□□□□ 0.37
LINC01006-204ENST00000435354 MYH8P13535 1937 aa17.37■□□□□ 0.37
LINC01006-204ENST00000435354 USP17L15C9J2P7 530 aa17.36■□□□□ 0.37
LINC01006-204ENST00000435354 USP17L13C9JLJ4 530 aa17.36■□□□□ 0.37
LINC01006-204ENST00000435354 USP17L11C9JVI0 530 aa17.36■□□□□ 0.37
LINC01006-204ENST00000435354 USP17L18D6R9N7 530 aa17.36■□□□□ 0.37
LINC01006-204ENST00000435354 USP17L22D6RA61 530 aa17.36■□□□□ 0.37
LINC01006-204ENST00000435354 USP17L17D6RBQ6 530 aa17.36■□□□□ 0.37
LINC01006-204ENST00000435354 USP17L19D6RCP7 530 aa17.36■□□□□ 0.37
LINC01006-204ENST00000435354 USP17L20D6RJB6 530 aa17.36■□□□□ 0.37
LINC01006-204ENST00000435354 CNMDO75829 334 aa17.36■□□□□ 0.37
LINC01006-204ENST00000435354 USP14P54578 494 aa17.36■□□□□ 0.37
LINC01006-204ENST00000435354 USP17L24Q0WX57 530 aa17.36■□□□□ 0.37
LINC01006-204ENST00000435354 GTF3C2Q8WUA4 911 aaPredicted RBP17.36■□□□□ 0.37
LINC01006-204ENST00000435354 DPF3Q92784 378 aa17.36■□□□□ 0.37
LINC01006-204ENST00000435354 CABP5Q9NP86 173 aa17.36■□□□□ 0.37
LINC01006-204ENST00000435354 A0A1W2PRG0 241 aa17.35■□□□□ 0.37
LINC01006-204ENST00000435354 SMIM22K7EJ46 135 aa17.35■□□□□ 0.37
LINC01006-204ENST00000435354 TFRCP02786 760 aaKnown RBP17.35■□□□□ 0.37
LINC01006-204ENST00000435354 CYP2B6P20813 491 aa17.35■□□□□ 0.37
LINC01006-204ENST00000435354 MAPK4P31152 587 aa17.35■□□□□ 0.37
LINC01006-204ENST00000435354 CATSPERGQ6ZRH7 1159 aa17.35■□□□□ 0.37
LINC01006-204ENST00000435354 USP6NLQ92738 828 aa17.35■□□□□ 0.37
LINC01006-204ENST00000435354 DYNLL2Q96FJ2 89 aa17.35■□□□□ 0.37
LINC01006-204ENST00000435354 HTATIP2Q9BUP3 242 aa17.35■□□□□ 0.37
LINC01006-204ENST00000435354 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.35■□□□□ 0.37
LINC01006-204ENST00000435354 XRCC5P13010 732 aaKnown RBP17.34■□□□□ 0.37
LINC01006-204ENST00000435354 UBE3CQ15386 1083 aa17.34■□□□□ 0.37
LINC01006-204ENST00000435354 MAP3K21Q5TCX8 1036 aa17.34■□□□□ 0.37
LINC01006-204ENST00000435354 GPR142Q7Z601 462 aa17.34■□□□□ 0.37
LINC01006-204ENST00000435354 SOCS4Q8WXH5 440 aa17.34■□□□□ 0.37
LINC01006-204ENST00000435354 ALPK3Q96L96 1907 aa17.34■□□□□ 0.37
LINC01006-204ENST00000435354 NUDT12Q9BQG2 462 aa17.34■□□□□ 0.37
LINC01006-204ENST00000435354 RABGAP1Q9Y3P9 1069 aa17.34■□□□□ 0.37
LINC01006-204ENST00000435354 RLFQ13129 1914 aa17.33■□□□□ 0.37
LINC01006-204ENST00000435354 RPTORQ8N122 1335 aa17.33■□□□□ 0.36
LINC01006-204ENST00000435354 CYP2D7A0A087X1C5 515 aa17.33■□□□□ 0.36
LINC01006-204ENST00000435354 CAPN2P17655 700 aa17.33■□□□□ 0.36
LINC01006-204ENST00000435354 MORN1Q5T089 497 aa17.33■□□□□ 0.36
LINC01006-204ENST00000435354 LBX2Q6XYB7 198 aa17.33■□□□□ 0.36
LINC01006-204ENST00000435354 PLEKHH3Q7Z736 793 aa17.33■□□□□ 0.36
LINC01006-204ENST00000435354 DIS3LQ8TF46 1054 aaKnown RBP17.33■□□□□ 0.36
LINC01006-204ENST00000435354 RPAP3Q9H6T3 665 aaPredicted RBP17.33■□□□□ 0.36
LINC01006-204ENST00000435354 DCTPP1Q9H773 170 aa17.33■□□□□ 0.36
LINC01006-204ENST00000435354 ATP8A2Q9NTI2 1148 aa17.33■□□□□ 0.36
LINC01006-204ENST00000435354 SPDYE16A6NNV3 312 aaPredicted RBP17.32■□□□□ 0.36
LINC01006-204ENST00000435354 MPHOSPH10O00566 681 aaKnown RBP17.32■□□□□ 0.36
LINC01006-204ENST00000435354 CCL14Q16627 93 aa17.32■□□□□ 0.36
LINC01006-204ENST00000435354 KIAA1755Q5JYT7 1200 aa17.32■□□□□ 0.36
LINC01006-204ENST00000435354 TMEM179Q6ZVK1 233 aa17.32■□□□□ 0.36
LINC01006-204ENST00000435354 CLEC10AQ8IUN9 316 aa17.32■□□□□ 0.36
LINC01006-204ENST00000435354 SIAH1Q8IUQ4 282 aa17.32■□□□□ 0.36
LINC01006-204ENST00000435354 HMX1Q9NP08 348 aaPredicted RBP17.32■□□□□ 0.36
LINC01006-204ENST00000435354 ECHDC1Q9NTX5 307 aa17.32■□□□□ 0.36
LINC01006-204ENST00000435354 BTBD7Q9P203 1132 aa17.32■□□□□ 0.36
LINC01006-204ENST00000435354 SWAP70Q9UH65 585 aa17.32■□□□□ 0.36
LINC01006-204ENST00000435354 USP17L12C9JPN9 530 aa17.31■□□□□ 0.36
LINC01006-204ENST00000435354 USP17L21D6R901 530 aa17.31■□□□□ 0.36
LINC01006-204ENST00000435354 PRKAR2AP13861 404 aaKnown RBP17.31■□□□□ 0.36
LINC01006-204ENST00000435354 AKR1B1P15121 316 aa17.31■□□□□ 0.36
LINC01006-204ENST00000435354 MNX1P50219 401 aaPredicted RBP17.31■□□□□ 0.36
LINC01006-204ENST00000435354 FXR1P51114 621 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC01006-204ENST00000435354 C12orf60Q5U649 245 aa17.31■□□□□ 0.36
LINC01006-204ENST00000435354 CCAR1Q8IX12 1150 aaKnown RBP17.31■□□□□ 0.36
LINC01006-204ENST00000435354 PAWRQ96IZ0 340 aaKnown RBP17.31■□□□□ 0.36
LINC01006-204ENST00000435354 PUS7LQ9H0K6 701 aaKnown RBP17.31■□□□□ 0.36
LINC01006-204ENST00000435354 A0A0G2JMZ2 1700 aa17.3■□□□□ 0.36
LINC01006-204ENST00000435354 RANBP2P49792 3224 aaKnown RBP17.3■□□□□ 0.36
LINC01006-204ENST00000435354 ZKSCAN1P17029 563 aaPredicted RBP17.3■□□□□ 0.36
LINC01006-204ENST00000435354 RGS2P41220 211 aa17.3■□□□□ 0.36
LINC01006-204ENST00000435354 CCNA1P78396 465 aa17.3■□□□□ 0.36
LINC01006-204ENST00000435354 TSHZ3Q63HK5 1081 aa17.3■□□□□ 0.36
LINC01006-204ENST00000435354 CHRDL2Q6WN34 429 aa17.3■□□□□ 0.36
LINC01006-204ENST00000435354 APBA2Q99767 749 aa17.3■□□□□ 0.36
LINC01006-204ENST00000435354 PCDH10Q9P2E7 1040 aa17.3■□□□□ 0.36
LINC01006-204ENST00000435354 PARP14Q460N5 1801 aa17.29■□□□□ 0.36
LINC01006-204ENST00000435354 CDK8P49336 464 aa17.29■□□□□ 0.36
LINC01006-204ENST00000435354 CACNB2Q08289 660 aaPredicted RBP17.29■□□□□ 0.36
LINC01006-204ENST00000435354 MAP2K5Q13163 448 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms