RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 TSPY2A6NKD2 308 aa18.41■□□□□ 0.54
TREX1-201ENST00000433541 BTBD19C9JJ37 291 aa18.41■□□□□ 0.54
TREX1-201ENST00000433541 SGSM2O43147 1006 aa18.41■□□□□ 0.54
TREX1-201ENST00000433541 RANBP6O60518 1105 aaKnown RBP18.41■□□□□ 0.54
TREX1-201ENST00000433541 RASA1P20936 1047 aa18.41■□□□□ 0.54
TREX1-201ENST00000433541 ICA1Q05084 483 aa18.41■□□□□ 0.54
TREX1-201ENST00000433541 PRRT2Q7Z6L0 340 aaPredicted RBP18.41■□□□□ 0.54
TREX1-201ENST00000433541 FAM43AQ8N2R8 423 aa18.41■□□□□ 0.54
TREX1-201ENST00000433541 PTPN18Q99952 460 aa18.41■□□□□ 0.54
TREX1-201ENST00000433541 WDR18Q9BV38 432 aa18.41■□□□□ 0.54
TREX1-201ENST00000433541 TESPA1A2RU30 521 aaPredicted RBP18.4■□□□□ 0.54
TREX1-201ENST00000433541 PDHXO00330 501 aa18.4■□□□□ 0.54
TREX1-201ENST00000433541 BACE1P56817 501 aa18.4■□□□□ 0.54
TREX1-201ENST00000433541 MFSD6Q6ZSS7 791 aa18.4■□□□□ 0.54
TREX1-201ENST00000433541 CLEC10AQ8IUN9 316 aa18.4■□□□□ 0.54
TREX1-201ENST00000433541 ESYT1Q9BSJ8 1104 aa18.4■□□□□ 0.54
TREX1-201ENST00000433541 ANO2Q9NQ90 1003 aa18.4■□□□□ 0.54
TREX1-201ENST00000433541 CASP8AP2Q9UKL3 1982 aa18.4■□□□□ 0.54
TREX1-201ENST00000433541 C19orf81C9J6K1 198 aa18.39■□□□□ 0.53
TREX1-201ENST00000433541 LBX1P52954 281 aa18.39■□□□□ 0.53
TREX1-201ENST00000433541 USP14P54578 494 aa18.39■□□□□ 0.53
TREX1-201ENST00000433541 DGKZQ13574 1117 aa18.39■□□□□ 0.53
TREX1-201ENST00000433541 FAM47AQ5JRC9 791 aa18.39■□□□□ 0.53
TREX1-201ENST00000433541 USP17L2Q6R6M4 530 aa18.39■□□□□ 0.53
TREX1-201ENST00000433541 ANKRD23Q86SG2 305 aa18.39■□□□□ 0.53
TREX1-201ENST00000433541 RNF41Q9H4P4 317 aaPredicted RBP18.39■□□□□ 0.53
TREX1-201ENST00000433541 SH2D4AQ9H788 454 aa18.39■□□□□ 0.53
TREX1-201ENST00000433541 KANSL2Q9H9L4 492 aa18.39■□□□□ 0.53
TREX1-201ENST00000433541 ZFYVE28Q9HCC9 887 aa18.39■□□□□ 0.53
TREX1-201ENST00000433541 ANAPC4Q9UJX5 808 aa18.39■□□□□ 0.53
TREX1-201ENST00000433541 U3KPZ7 1027 aaPredicted RBP18.39■□□□□ 0.53
TREX1-201ENST00000433541 GUCY1A2P33402 732 aa18.38■□□□□ 0.53
TREX1-201ENST00000433541 TFAP4Q01664 338 aa18.38■□□□□ 0.53
TREX1-201ENST00000433541 PABPC4Q13310 644 aaKnown RBP eCLIP18.38■□□□□ 0.53
TREX1-201ENST00000433541 PROCA1Q8NCQ7 364 aaPredicted RBP18.38■□□□□ 0.53
TREX1-201ENST00000433541 ACER1Q8TDN7 264 aa18.38■□□□□ 0.53
TREX1-201ENST00000433541 INCENPQ9NQS7 918 aa18.38■□□□□ 0.53
TREX1-201ENST00000433541 AGTPBP1Q9UPW5 1226 aa18.38■□□□□ 0.53
TREX1-201ENST00000433541 GREB1LQ9C091 1923 aaPredicted RBP18.38■□□□□ 0.53
TREX1-201ENST00000433541 HSPA8P11142 646 aaKnown RBP18.37■□□□□ 0.53
TREX1-201ENST00000433541 PTH1RQ03431 593 aa18.37■□□□□ 0.53
TREX1-201ENST00000433541 CRHR2Q13324 411 aa18.37■□□□□ 0.53
TREX1-201ENST00000433541 AKNAD1Q5T1N1 836 aa18.37■□□□□ 0.53
TREX1-201ENST00000433541 SMCR8Q8TEV9 937 aaPredicted RBP18.37■□□□□ 0.53
TREX1-201ENST00000433541 PARK7Q99497 189 aaKnown RBP18.37■□□□□ 0.53
TREX1-201ENST00000433541 PNMA3Q9UL41 463 aa18.37■□□□□ 0.53
TREX1-201ENST00000433541 EEF2P13639 858 aaKnown RBP18.36■□□□□ 0.53
TREX1-201ENST00000433541 OSBPP22059 807 aa18.36■□□□□ 0.53
TREX1-201ENST00000433541 IRX3P78415 501 aaPredicted RBP18.36■□□□□ 0.53
TREX1-201ENST00000433541 TREML2Q5T2D2 321 aa18.36■□□□□ 0.53
TREX1-201ENST00000433541 TBC1D10CQ8IV04 446 aa18.36■□□□□ 0.53
TREX1-201ENST00000433541 KIAA1683Q9H0B3 1180 aa18.36■□□□□ 0.53
TREX1-201ENST00000433541 ZCCHC17Q9NP64 241 aaKnown RBP18.36■□□□□ 0.53
TREX1-201ENST00000433541 ISY1Q9ULR0 285 aaKnown RBP18.36■□□□□ 0.53
TREX1-201ENST00000433541 ORC4O43929 436 aa18.35■□□□□ 0.53
TREX1-201ENST00000433541 PCP11498 1178 aaKnown RBP18.35■□□□□ 0.53
TREX1-201ENST00000433541 SH3D19Q5HYK7 790 aa18.35■□□□□ 0.53
TREX1-201ENST00000433541 STAG1Q8WVM7 1258 aa18.35■□□□□ 0.53
TREX1-201ENST00000433541 GOPCQ9HD26 462 aa18.35■□□□□ 0.53
TREX1-201ENST00000433541 CLIP2Q9UDT6 1046 aa18.35■□□□□ 0.53
TREX1-201ENST00000433541 STX8Q9UNK0 236 aa18.35■□□□□ 0.53
TREX1-201ENST00000433541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.35■□□□□ 0.53
TREX1-201ENST00000433541 RBM8AQ9Y5S9 174 aaKnown RBP18.35■□□□□ 0.53
TREX1-201ENST00000433541 CYP2C8P10632 490 aa18.34■□□□□ 0.53
TREX1-201ENST00000433541 TRDNQ13061 729 aa18.34■□□□□ 0.53
TREX1-201ENST00000433541 MOGSQ13724 837 aa18.34■□□□□ 0.53
TREX1-201ENST00000433541 PPP4R3BQ5MIZ7 849 aa18.34■□□□□ 0.53
TREX1-201ENST00000433541 GPAT2Q6NUI2 795 aa18.34■□□□□ 0.53
TREX1-201ENST00000433541 SAMD1Q6SPF0 538 aaPredicted RBP18.34■□□□□ 0.53
TREX1-201ENST00000433541 SPICE1Q8N0Z3 855 aa18.34■□□□□ 0.53
TREX1-201ENST00000433541 NEDD1Q8NHV4 660 aa18.34■□□□□ 0.53
TREX1-201ENST00000433541 ESR2Q92731 530 aa18.34■□□□□ 0.53
TREX1-201ENST00000433541 CEP95Q96GE4 821 aa18.34■□□□□ 0.53
TREX1-201ENST00000433541 TANGO6Q9C0B7 1094 aa18.34■□□□□ 0.53
TREX1-201ENST00000433541 NEDD4P46934 1319 aa18.33■□□□□ 0.53
TREX1-201ENST00000433541 A0A1W2PRG0 241 aa18.33■□□□□ 0.52
TREX1-201ENST00000433541 TTLL1O95922 423 aa18.33■□□□□ 0.52
TREX1-201ENST00000433541 KRT23Q9C075 422 aa18.33■□□□□ 0.52
TREX1-201ENST00000433541 NBPF3Q9H094 633 aa18.33■□□□□ 0.52
TREX1-201ENST00000433541 CNNM2Q9H8M5 875 aa18.33■□□□□ 0.52
TREX1-201ENST00000433541 EMILIN3Q9NT22 766 aa18.33■□□□□ 0.52
TREX1-201ENST00000433541 GPR25O00155 361 aa18.32■□□□□ 0.52
TREX1-201ENST00000433541 ECM2O94769 699 aaPredicted RBP18.32■□□□□ 0.52
TREX1-201ENST00000433541 VCAM1P19320 739 aa18.32■□□□□ 0.52
TREX1-201ENST00000433541 RALYLQ86SE5 291 aaKnown RBP18.32■□□□□ 0.52
TREX1-201ENST00000433541 MAP4K1Q92918 833 aa18.32■□□□□ 0.52
TREX1-201ENST00000433541 LSG1Q9H089 658 aaKnown RBP18.32■□□□□ 0.52
TREX1-201ENST00000433541 R3HDMLQ9H3Y0 253 aa18.32■□□□□ 0.52
TREX1-201ENST00000433541 RPAP3Q9H6T3 665 aaPredicted RBP18.32■□□□□ 0.52
TREX1-201ENST00000433541 NYAP2Q9P242 653 aa18.32■□□□□ 0.52
TREX1-201ENST00000433541 CPA4Q9UI42 421 aa18.32■□□□□ 0.52
TREX1-201ENST00000433541 MTMR7Q9Y216 660 aa18.32■□□□□ 0.52
TREX1-201ENST00000433541 SLC45A1Q9Y2W3 748 aa18.32■□□□□ 0.52
TREX1-201ENST00000433541 TMX2Q9Y320 296 aa18.32■□□□□ 0.52
TREX1-201ENST00000433541 TACC3Q9Y6A5 838 aa18.32■□□□□ 0.52
TREX1-201ENST00000433541 PLIN4Q96Q06 1357 aa18.31■□□□□ 0.52
TREX1-201ENST00000433541 B4E1Z4 1266 aa18.31■□□□□ 0.52
TREX1-201ENST00000433541 NMT2O60551 498 aa18.31■□□□□ 0.52
TREX1-201ENST00000433541 TLR2O60603 784 aa18.31■□□□□ 0.52
TREX1-201ENST00000433541 FKTNO75072 461 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms