RNA–Protein interactions for RNA: ENST00000433496.5

RFC4-207, Transcript of replication factor C subunit 4, humanhuman

TSL 5 BASIC

Gene RFC4, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-207ENST00000433496 DCTPP1Q9H773 170 aa11.61□□□□□ -0.55
RFC4-207ENST00000433496 DCP1AQ9NPI6 582 aaPredicted RBP11.61□□□□□ -0.55
RFC4-207ENST00000433496 MORF4L1Q9UBU8 362 aa11.61□□□□□ -0.55
RFC4-207ENST00000433496 SWAP70Q9UH65 585 aa11.61□□□□□ -0.55
RFC4-207ENST00000433496 CEP290O15078 2479 aa11.61□□□□□ -0.55
RFC4-207ENST00000433496 PLXNB2O15031 1838 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 USP17L15C9J2P7 530 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 USP17L13C9JLJ4 530 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 USP17L11C9JVI0 530 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 USP17L18D6R9N7 530 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 USP17L22D6RA61 530 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 USP17L17D6RBQ6 530 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 USP17L19D6RCP7 530 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 USP17L20D6RJB6 530 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 GJB1P08034 283 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 RRP1P56182 461 aaKnown RBP11.6□□□□□ -0.55
RFC4-207ENST00000433496 USP17L24Q0WX57 530 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 GCC1Q96CN9 775 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 YTHDC1Q96MU7 727 aaKnown RBP11.6□□□□□ -0.55
RFC4-207ENST00000433496 P2RX7Q99572 595 aaKnown RBP11.6□□□□□ -0.55
RFC4-207ENST00000433496 PAGR1Q9BTK6 254 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 KIAA1683Q9H0B3 1180 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 SH2D4AQ9H788 454 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 EMILIN3Q9NT22 766 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 SLC4A4Q9Y6R1 1079 aa11.6□□□□□ -0.55
RFC4-207ENST00000433496 ERC2O15083 957 aa11.59□□□□□ -0.55
RFC4-207ENST00000433496 GLRX3O76003 335 aaKnown RBP11.59□□□□□ -0.55
RFC4-207ENST00000433496 HMGCRP04035 888 aa11.59□□□□□ -0.55
RFC4-207ENST00000433496 MAPK4P31152 587 aa11.59□□□□□ -0.55
RFC4-207ENST00000433496 GJA8P48165 433 aa11.59□□□□□ -0.55
RFC4-207ENST00000433496 CCNA1P78396 465 aa11.59□□□□□ -0.55
RFC4-207ENST00000433496 SEPT2Q15019 361 aa11.59□□□□□ -0.55
RFC4-207ENST00000433496 TMEM179Q6ZVK1 233 aa11.59□□□□□ -0.55
RFC4-207ENST00000433496 SOCS4Q8WXH5 440 aa11.59□□□□□ -0.55
RFC4-207ENST00000433496 C12orf42Q96LP6 360 aa11.59□□□□□ -0.55
RFC4-207ENST00000433496 UNC93B1Q9H1C4 597 aa11.59□□□□□ -0.55
RFC4-207ENST00000433496 ARHGEF10LQ9HCE6 1279 aa11.59□□□□□ -0.55
RFC4-207ENST00000433496 PRKAB2O43741 272 aa11.58□□□□□ -0.56
RFC4-207ENST00000433496 ZFYP08048 801 aaPredicted RBP11.58□□□□□ -0.56
RFC4-207ENST00000433496 CYP2D6P10635 497 aa11.58□□□□□ -0.56
RFC4-207ENST00000433496 CAPN2P17655 700 aa11.58□□□□□ -0.56
RFC4-207ENST00000433496 VCAM1P19320 739 aa11.58□□□□□ -0.56
RFC4-207ENST00000433496 ERVK-9P63128 1117 aa11.58□□□□□ -0.56
RFC4-207ENST00000433496 ERVK-24P63145 666 aa11.58□□□□□ -0.56
RFC4-207ENST00000433496 GABPAQ06546 454 aa11.58□□□□□ -0.56
RFC4-207ENST00000433496 WDR78Q5VTH9 848 aa11.58□□□□□ -0.56
RFC4-207ENST00000433496 U2AF1L4Q8WU68 220 aaKnown RBP11.58□□□□□ -0.56
RFC4-207ENST00000433496 NUDT12Q9BQG2 462 aa11.58□□□□□ -0.56
RFC4-207ENST00000433496 HTATIP2Q9BUP3 242 aa11.58□□□□□ -0.56
RFC4-207ENST00000433496 TANGO6Q9C0B7 1094 aa11.58□□□□□ -0.56
RFC4-207ENST00000433496 ARPP21Q9UBL0 812 aaPredicted RBP11.58□□□□□ -0.56
RFC4-207ENST00000433496 TTC41PQ6P2S7 1318 aa11.58□□□□□ -0.56
RFC4-207ENST00000433496 MYH4Q9Y623 1939 aa11.57□□□□□ -0.56
RFC4-207ENST00000433496 USP17L12C9JPN9 530 aa11.57□□□□□ -0.56
RFC4-207ENST00000433496 USP17L21D6R901 530 aa11.57□□□□□ -0.56
RFC4-207ENST00000433496 FARP2O94887 1054 aaPredicted RBP11.57□□□□□ -0.56
RFC4-207ENST00000433496 TFRCP02786 760 aaKnown RBP11.57□□□□□ -0.56
RFC4-207ENST00000433496 ICA1Q05084 483 aa11.57□□□□□ -0.56
RFC4-207ENST00000433496 SLFNL1Q499Z3 407 aa11.57□□□□□ -0.56
RFC4-207ENST00000433496 TSHZ3Q63HK5 1081 aa11.57□□□□□ -0.56
RFC4-207ENST00000433496 TRMT44Q8IYL2 757 aaKnown RBP11.57□□□□□ -0.56
RFC4-207ENST00000433496 KBTBD3Q8NAB2 608 aa11.57□□□□□ -0.56
RFC4-207ENST00000433496 SLC44A5Q8NCS7 719 aa11.57□□□□□ -0.56
RFC4-207ENST00000433496 ACER1Q8TDN7 264 aa11.57□□□□□ -0.56
RFC4-207ENST00000433496 DYNLL2Q96FJ2 89 aa11.57□□□□□ -0.56
RFC4-207ENST00000433496 CCDC17Q96LX7 622 aa11.57□□□□□ -0.56
RFC4-207ENST00000433496 RPAP3Q9H6T3 665 aaPredicted RBP11.57□□□□□ -0.56
RFC4-207ENST00000433496 TXNRD2Q9NNW7 524 aa11.57□□□□□ -0.56
RFC4-207ENST00000433496 RABGAP1Q9Y3P9 1069 aa11.57□□□□□ -0.56
RFC4-207ENST00000433496 IVNS1ABPQ9Y6Y0 642 aa11.57□□□□□ -0.56
RFC4-207ENST00000433496 PARP14Q460N5 1801 aa11.57□□□□□ -0.56
RFC4-207ENST00000433496 A0A0G2JMZ2 1700 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 RNF113AO15541 343 aaKnown RBP11.56□□□□□ -0.56
RFC4-207ENST00000433496 SGPL1O95470 568 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 ZKSCAN1P17029 563 aaPredicted RBP11.56□□□□□ -0.56
RFC4-207ENST00000433496 GNAT2P19087 354 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 CYP2B6P20813 491 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 RGS2P41220 211 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 C12orf60Q5U649 245 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 CATSPERGQ6ZRH7 1159 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 C16orf86Q6ZW13 317 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 PLEKHH3Q7Z736 793 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 APPBP2Q92624 585 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 DPF3Q92784 378 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 SHISA4Q96DD7 197 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 DEFB118Q96PH6 123 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 FSD1Q9BTV5 496 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.56□□□□□ -0.56
RFC4-207ENST00000433496 PUS7LQ9H0K6 701 aaKnown RBP11.56□□□□□ -0.56
RFC4-207ENST00000433496 RBPJLQ9UBG7 517 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 COL11A1P12107 1806 aaPredicted RBP11.56□□□□□ -0.56
RFC4-207ENST00000433496 BRCA2P51587 3418 aa11.56□□□□□ -0.56
RFC4-207ENST00000433496 CYP2D7A0A087X1C5 515 aa11.55□□□□□ -0.56
RFC4-207ENST00000433496 RAD21O60216 631 aa11.55□□□□□ -0.56
RFC4-207ENST00000433496 APPP05067 770 aa11.55□□□□□ -0.56
RFC4-207ENST00000433496 AKR1B1P15121 316 aa11.55□□□□□ -0.56
RFC4-207ENST00000433496 MX1P20591 662 aa11.55□□□□□ -0.56
RFC4-207ENST00000433496 GUCY1A2P33402 732 aa11.55□□□□□ -0.56
RFC4-207ENST00000433496 TDO2P48775 406 aa11.55□□□□□ -0.56
RFC4-207ENST00000433496 CDK8P49336 464 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms