RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 RRAGBQ5VZM2 374 aa13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 KANK3Q6NY19 840 aa13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 NUP133Q8WUM0 1156 aa13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 CENPHQ9H3R5 247 aa13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 VIPAS39Q9H9C1 493 aa13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 AARSP49588 968 aaKnown RBP eCLIP13.02□□□□□ -0.323e-6■□□□□ 9.9
HMGCS1-202ENST00000433297 ATP1A2P50993 1020 aa13.02□□□□□ -0.32
HMGCS1-202ENST00000433297 AMPD2Q01433 879 aa13.02□□□□□ -0.32
HMGCS1-202ENST00000433297 UBXN1Q04323 297 aa13.02□□□□□ -0.32
HMGCS1-202ENST00000433297 KRT31Q15323 416 aa13.02□□□□□ -0.32
HMGCS1-202ENST00000433297 FBXL16Q8N461 479 aa13.02□□□□□ -0.32
HMGCS1-202ENST00000433297 TRIML1Q8N9V2 468 aa13.02□□□□□ -0.32
HMGCS1-202ENST00000433297 CEP89Q96ST8 783 aa13.02□□□□□ -0.32
HMGCS1-202ENST00000433297 ADAMTS13Q76LX8 1427 aa13.02□□□□□ -0.33
HMGCS1-202ENST00000433297 LAMA4Q16363 1823 aa13.02□□□□□ -0.33
HMGCS1-202ENST00000433297 MYO1FO00160 1098 aa13.02□□□□□ -0.33
HMGCS1-202ENST00000433297 EYA2O00167 538 aa13.02□□□□□ -0.33
HMGCS1-202ENST00000433297 NDUFAB1O14561 156 aa13.02□□□□□ -0.33
HMGCS1-202ENST00000433297 ACTN4O43707 911 aaKnown RBP13.02□□□□□ -0.33
HMGCS1-202ENST00000433297 IDH1O75874 414 aaKnown RBP13.02□□□□□ -0.33
HMGCS1-202ENST00000433297 CPP00450 1065 aa13.02□□□□□ -0.33
HMGCS1-202ENST00000433297 CEBPAP49715 358 aaPredicted RBP13.02□□□□□ -0.33
HMGCS1-202ENST00000433297 KCTD16Q68DU8 428 aa13.02□□□□□ -0.33
HMGCS1-202ENST00000433297 ANKRD18AQ8IVF6 992 aa13.02□□□□□ -0.33
HMGCS1-202ENST00000433297 APPBP2Q92624 585 aa13.02□□□□□ -0.33
HMGCS1-202ENST00000433297 JAKMIP2Q96AA8 810 aa13.02□□□□□ -0.33
HMGCS1-202ENST00000433297 RUFY1Q96T51 708 aa13.02□□□□□ -0.33
HMGCS1-202ENST00000433297 PSMB7Q99436 277 aa13.02□□□□□ -0.33
HMGCS1-202ENST00000433297 MACROD2A1Z1Q3 448 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 AGPSO00116 658 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 SH2B2O14492 632 aaPredicted RBP13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 KIAA0754O94854 1291 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 NDUFA10O95299 355 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 ATP6V1AP38606 617 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 USP8P40818 1118 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 OXER1Q8TDS5 423 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 AIDAQ96BJ3 306 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 FAM212AQ96EL1 285 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 EEF2KMTQ96G04 330 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 XAGE2Q96GT9 111 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 FOXO4P98177 505 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 NT5DC1Q5TFE4 455 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 OTUD6BQ8N6M0 293 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 hCG_1642624A0A1W2PR95 340 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 SLC7A5Q01650 507 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 RNF187Q5TA31 235 aaPredicted RBP13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 TRAPPC11Q7Z392 1133 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 BANK1Q8NDB2 785 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 RRP36Q96EU6 259 aaKnown RBP13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 ZBTB3Q9H5J0 574 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 PXDNQ92626 1479 aa13.01□□□□□ -0.33
HMGCS1-202ENST00000433297 A0A087X0B3 334 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
HMGCS1-202ENST00000433297 PBX1P40424 430 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 PDCLQ13371 301 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 RILPL1Q5EBL4 403 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 GPIHBP1Q8IV16 184 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 TRIM22Q8IYM9 498 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 CCDC51Q96ER9 411 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 PAGE5Q96GU1 130 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 MYO1AQ9UBC5 1043 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 FAM205CA6NFA0 338 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 PPFIA1Q13136 1202 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 SWT1Q5T5J6 900 aaKnown RBP13□□□□□ -0.33
HMGCS1-202ENST00000433297 KCNV1Q6PIU1 500 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 CCNI2Q6ZMN8 369 aaPredicted RBP13□□□□□ -0.33
HMGCS1-202ENST00000433297 PHF8Q9UPP1 1060 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 MMP1P03956 469 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 CCDC172P0C7W6 258 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 IDEP14735 1019 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 CTDSPL2Q05D32 466 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 PPARAQ07869 468 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 DPYDQ12882 1025 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 EZH2Q15910 746 aaKnown RBP13□□□□□ -0.33
HMGCS1-202ENST00000433297 NTRK3Q16288 839 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 ESCO1Q5FWF5 840 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 NBPF14Q5TI25 921 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 CCDC70Q6NSX1 233 aa13□□□□□ -0.33
HMGCS1-202ENST00000433297 TNRQ92752 1358 aa12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 ZFYP08048 801 aaPredicted RBP12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 COPB1P53618 953 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 PCMTD1Q96MG8 357 aaPredicted RBP12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 REXO2Q9Y3B8 237 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 SRPRBQ9Y5M8 271 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 DUSP10Q9Y6W6 482 aa12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 TDO2P48775 406 aa12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 CUL4BQ13620 913 aa12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 CCDC57Q2TAC2 916 aa12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 CDKAL1Q5VV42 579 aa12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 GBP6Q6ZN66 633 aa12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 HDAC7Q8WUI4 952 aa12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 SYMPKQ92797 1274 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 FAM217BQ9NTX9 383 aaPredicted RBP12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 VPS54Q9P1Q0 977 aa12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 HEG1Q9ULI3 1381 aa12.99□□□□□ -0.33
HMGCS1-202ENST00000433297 PPP1R3GB7ZBB8 358 aa12.98□□□□□ -0.33
HMGCS1-202ENST00000433297 IPO7O95373 1038 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-202ENST00000433297 SNRPA1P09661 255 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-202ENST00000433297 ATP2B2Q01814 1243 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms