RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 CAP2P40123 477 aa31.01■■■□□ 2.55
TMEM248-205ENST00000433271 LDHDQ86WU2 507 aa31.01■■■□□ 2.55
TMEM248-205ENST00000433271 NAP1L2Q9ULW6 460 aaPredicted RBP31.01■■■□□ 2.55
TMEM248-205ENST00000433271 STX8Q9UNK0 236 aa31.01■■■□□ 2.55
TMEM248-205ENST00000433271 GREB1LQ9C091 1923 aaPredicted RBP31■■■□□ 2.55
TMEM248-205ENST00000433271 GH2P01242 217 aa31■■■□□ 2.55
TMEM248-205ENST00000433271 CUL4AQ13619 759 aa31■■■□□ 2.55
TMEM248-205ENST00000433271 SHROOM1Q2M3G4 852 aaPredicted RBP31■■■□□ 2.55
TMEM248-205ENST00000433271 SYNE3Q6ZMZ3 975 aa31■■■□□ 2.55
TMEM248-205ENST00000433271 SLKQ9H2G2 1235 aaPredicted RBP31■■■□□ 2.55
TMEM248-205ENST00000433271 KANSL2Q9H9L4 492 aa31■■■□□ 2.55
TMEM248-205ENST00000433271 PFKFB2O60825 505 aa30.99■■■□□ 2.55
TMEM248-205ENST00000433271 JAG1P78504 1218 aa30.99■■■□□ 2.55
TMEM248-205ENST00000433271 DLK2Q6UY11 383 aa30.99■■■□□ 2.55
TMEM248-205ENST00000433271 GLIS2Q9BZE0 524 aaPredicted RBP30.99■■■□□ 2.55
TMEM248-205ENST00000433271 ZNF112Q9UJU3 913 aa30.99■■■□□ 2.55
TMEM248-205ENST00000433271 SSC5DA1L4H1 1573 aa30.99■■■□□ 2.55
TMEM248-205ENST00000433271 GOLGA8BA8MQT2 603 aa30.98■■■□□ 2.55
TMEM248-205ENST00000433271 TTLL1O95922 423 aa30.98■■■□□ 2.55
TMEM248-205ENST00000433271 GUCY1A2P33402 732 aa30.98■■■□□ 2.55
TMEM248-205ENST00000433271 CATIPQ7Z7H3 387 aa30.98■■■□□ 2.55
TMEM248-205ENST00000433271 CDCA5Q96FF9 252 aa30.98■■■□□ 2.55
TMEM248-205ENST00000433271 KAT14Q9H8E8 782 aa30.98■■■□□ 2.55
TMEM248-205ENST00000433271 HPS5Q9UPZ3 1129 aa30.98■■■□□ 2.55
TMEM248-205ENST00000433271 ZBTB43O43298 467 aa30.98■■■□□ 2.55
TMEM248-205ENST00000433271 CTNND1O60716 968 aaKnown RBP30.98■■■□□ 2.55
TMEM248-205ENST00000433271 RCAN1P53805 252 aa30.98■■■□□ 2.55
TMEM248-205ENST00000433271 STK3Q13188 491 aa30.98■■■□□ 2.55
TMEM248-205ENST00000433271 SEPT2Q15019 361 aa30.98■■■□□ 2.55
TMEM248-205ENST00000433271 ZNF654Q8IZM8 581 aa30.98■■■□□ 2.55
TMEM248-205ENST00000433271 NECAB1Q8N987 351 aa30.98■■■□□ 2.55
TMEM248-205ENST00000433271 GINM1Q9NU53 330 aa30.98■■■□□ 2.55
TMEM248-205ENST00000433271 ZBTB21Q9ULJ3 1066 aa30.98■■■□□ 2.55
TMEM248-205ENST00000433271 TOP1P11387 765 aaKnown RBP30.97■■■□□ 2.55
TMEM248-205ENST00000433271 MAP1SQ66K74 1059 aaPredicted RBP30.97■■■□□ 2.55
TMEM248-205ENST00000433271 GTF3C6Q969F1 213 aa30.97■■■□□ 2.55
TMEM248-205ENST00000433271 TMEM47Q9BQJ4 181 aa30.97■■■□□ 2.55
TMEM248-205ENST00000433271 HSP90AA1P07900 732 aaKnown RBP30.96■■■□□ 2.55
TMEM248-205ENST00000433271 ASNSP08243 561 aa30.96■■■□□ 2.55
TMEM248-205ENST00000433271 RAB3GAP1Q15042 981 aa30.96■■■□□ 2.55
TMEM248-205ENST00000433271 NYAP2Q9P242 653 aa30.96■■■□□ 2.55
TMEM248-205ENST00000433271 NF2P35240 595 aa30.95■■■□□ 2.55
TMEM248-205ENST00000433271 MICU3Q86XE3 530 aa30.95■■■□□ 2.55
TMEM248-205ENST00000433271 KLRG1Q96E93 195 aa30.95■■■□□ 2.55
TMEM248-205ENST00000433271 PPP1R12BO60237 982 aaPredicted RBP30.95■■■□□ 2.54
TMEM248-205ENST00000433271 SCRN1Q12765 414 aa30.95■■■□□ 2.54
TMEM248-205ENST00000433271 TROAPQ12815 778 aa30.95■■■□□ 2.54
TMEM248-205ENST00000433271 CLEC10AQ8IUN9 316 aa30.95■■■□□ 2.54
TMEM248-205ENST00000433271 CCDC83Q8IWF9 413 aa30.95■■■□□ 2.54
TMEM248-205ENST00000433271 PNMA1Q8ND90 353 aa30.95■■■□□ 2.54
TMEM248-205ENST00000433271 CHMP4CQ96CF2 233 aa30.95■■■□□ 2.54
TMEM248-205ENST00000433271 INTS4Q96HW7 963 aaKnown RBP30.95■■■□□ 2.54
TMEM248-205ENST00000433271 MYL10Q9BUA6 226 aa30.95■■■□□ 2.54
TMEM248-205ENST00000433271 CLIP2Q9UDT6 1046 aa30.95■■■□□ 2.54
TMEM248-205ENST00000433271 DDAH1O94760 285 aa30.94■■■□□ 2.54
TMEM248-205ENST00000433271 CALM1P0DP23 149 aa30.94■■■□□ 2.54
TMEM248-205ENST00000433271 CALM2P0DP24 149 aa30.94■■■□□ 2.54
TMEM248-205ENST00000433271 CALM3P0DP25 149 aa30.94■■■□□ 2.54
TMEM248-205ENST00000433271 CCT2P78371 535 aaKnown RBP30.94■■■□□ 2.54
TMEM248-205ENST00000433271 ICA1Q05084 483 aa30.94■■■□□ 2.54
TMEM248-205ENST00000433271 ST3GAL1Q11201 340 aa30.94■■■□□ 2.54
TMEM248-205ENST00000433271 WRNIP1Q96S55 665 aa30.94■■■□□ 2.54
TMEM248-205ENST00000433271 USP2O75604 605 aaPredicted RBP30.93■■■□□ 2.54
TMEM248-205ENST00000433271 EEF2P13639 858 aaKnown RBP30.93■■■□□ 2.54
TMEM248-205ENST00000433271 INPP5BP32019 993 aa30.93■■■□□ 2.54
TMEM248-205ENST00000433271 METAP2P50579 478 aaKnown RBP eCLIP30.93■■■□□ 2.54
TMEM248-205ENST00000433271 RAB11FIP4Q86YS3 637 aa30.93■■■□□ 2.54
TMEM248-205ENST00000433271 MKL1Q969V6 931 aa30.93■■■□□ 2.54
TMEM248-205ENST00000433271 PPP2R5BQ15173 497 aa30.92■■■□□ 2.54
TMEM248-205ENST00000433271 SIAH1Q8IUQ4 282 aa30.92■■■□□ 2.54
TMEM248-205ENST00000433271 NUP133Q8WUM0 1156 aa30.92■■■□□ 2.54
TMEM248-205ENST00000433271 FZD1Q9UP38 647 aa30.92■■■□□ 2.54
TMEM248-205ENST00000433271 NID2Q14112 1375 aa30.92■■■□□ 2.54
TMEM248-205ENST00000433271 DHX16O60231 1041 aaKnown RBP30.91■■■□□ 2.54
TMEM248-205ENST00000433271 RXRAP19793 462 aa30.91■■■□□ 2.54
TMEM248-205ENST00000433271 FANCBQ8NB91 859 aa30.91■■■□□ 2.54
TMEM248-205ENST00000433271 SPRYD3Q8NCJ5 442 aa30.91■■■□□ 2.54
TMEM248-205ENST00000433271 NCOA5Q9HCD5 579 aaKnown RBP30.91■■■□□ 2.54
TMEM248-205ENST00000433271 GOLGA8AA7E2F4 631 aa30.91■■■□□ 2.54
TMEM248-205ENST00000433271 ATP2B2Q01814 1243 aa30.91■■■□□ 2.54
TMEM248-205ENST00000433271 MAP3K14Q99558 947 aa30.91■■■□□ 2.54
TMEM248-205ENST00000433271 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.91■■■□□ 2.54
TMEM248-205ENST00000433271 PRKG1Q13976 671 aa30.9■■■□□ 2.54
TMEM248-205ENST00000433271 SCYL3Q8IZE3 742 aa30.9■■■□□ 2.54
TMEM248-205ENST00000433271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.9■■■□□ 2.54
TMEM248-205ENST00000433271 GPBP1L1Q9HC44 474 aaPredicted RBP30.9■■■□□ 2.54
TMEM248-205ENST00000433271 RTN1Q16799 776 aa30.89■■■□□ 2.54
TMEM248-205ENST00000433271 CCDC144CPQ8IYA2 1237 aa30.89■■■□□ 2.54
TMEM248-205ENST00000433271 ZKSCAN4Q969J2 545 aaPredicted RBP30.89■■■□□ 2.54
TMEM248-205ENST00000433271 FOXD4L1Q9NU39 408 aa30.89■■■□□ 2.54
TMEM248-205ENST00000433271 SYNPO2Q9UMS6 1093 aa30.89■■■□□ 2.54
TMEM248-205ENST00000433271 CCDC196A0A1B0GTZ2 297 aa30.88■■■□□ 2.53
TMEM248-205ENST00000433271 LRRC47Q8N1G4 583 aaKnown RBP30.88■■■□□ 2.53
TMEM248-205ENST00000433271 ARHGEF10LQ9HCE6 1279 aa30.88■■■□□ 2.53
TMEM248-205ENST00000433271 FAM217BQ9NTX9 383 aaPredicted RBP30.88■■■□□ 2.53
TMEM248-205ENST00000433271 TRAF5O00463 557 aa30.87■■■□□ 2.53
TMEM248-205ENST00000433271 IREB2P48200 963 aaKnown RBP30.87■■■□□ 2.53
TMEM248-205ENST00000433271 MAP3K9P80192 1104 aa30.87■■■□□ 2.53
TMEM248-205ENST00000433271 NOL9Q5SY16 702 aaKnown RBP30.87■■■□□ 2.53
TMEM248-205ENST00000433271 LLPHQ9BRT6 129 aaKnown RBP30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms