RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 ATP8B2P98198 1209 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 ECHDC1Q9NTX5 307 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 NDUFB9Q9Y6M9 179 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 PKD1L3Q7Z443 1732 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 WDR46O15213 610 aaKnown RBP5.38□□□□□ -1.55
UBE4A-202ENST00000431736 FOSL2P15408 326 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 ELNP15502 786 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 HERVK_113P62684 666 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 AAMPQ13685 434 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 SMARCC2Q8TAQ2 1214 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 ZBTB21Q9ULJ3 1066 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 CPLX1O14810 134 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 PQBP1O60828 265 aaKnown RBP5.38□□□□□ -1.55
UBE4A-202ENST00000431736 AKR1A1P14550 325 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 TKFCQ3LXA3 575 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 BRI3BPQ8WY22 251 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 CCPG1Q9ULG6 757 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 USP17L12C9JPN9 530 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 USP17L21D6R901 530 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 SGPL1O95470 568 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 ZNF853P0CG23 659 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 CAP2P40123 477 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 MAP2K5Q13163 448 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 NBPF20Q3BBV1 942 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 PAWRQ96IZ0 340 aaKnown RBP5.37□□□□□ -1.55
UBE4A-202ENST00000431736 MEIS3Q99687 375 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 SEZ6LQ9BYH1 1024 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 XPNPEP3Q9NQH7 507 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 PALD1Q9ULE6 856 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 WNK3Q9BYP7 1800 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 CKAP2LQ8IYA6 745 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 PXYLP1Q8TE99 480 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 ASCC2Q9H1I8 757 aaPredicted RBP5.37□□□□□ -1.55
UBE4A-202ENST00000431736 MLXIPQ9HAP2 919 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 CLIP2Q9UDT6 1046 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 LDLRAD1Q5T700 205 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 MICAL1Q8TDZ2 1067 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 AZI2Q9H6S1 392 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 TACC3Q9Y6A5 838 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 ZNF213O14771 459 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 GNAQP50148 359 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 SLFN13Q68D06 897 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 B4GALNT3Q6L9W6 998 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 TBC1D9Q6ZT07 1266 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 KATNAL1Q9BW62 490 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 FEM1BQ9UK73 627 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 HCN4Q9Y3Q4 1203 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 STK25O00506 426 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 EN2P19622 333 aaPredicted RBP5.37□□□□□ -1.55
UBE4A-202ENST00000431736 ERVK-9P63128 1117 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 ERVK-24P63145 666 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 TRIM29Q14134 588 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 PTPROQ16827 1216 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 GNASQ5JWF2 1037 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 SNRNP48Q6IEG0 339 aaKnown RBP5.37□□□□□ -1.55
UBE4A-202ENST00000431736 PSRC1Q6PGN9 363 aaPredicted RBP5.37□□□□□ -1.55
UBE4A-202ENST00000431736 CATIPQ7Z7H3 387 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 TMEM57Q8N5G2 664 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 RASSF8Q8NHQ8 419 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 RHPN1Q8TCX5 695 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 MRPL11Q9Y3B7 192 aaKnown RBP5.37□□□□□ -1.55
UBE4A-202ENST00000431736 KIF3AQ9Y496 699 aa5.37□□□□□ -1.55
UBE4A-202ENST00000431736 KPNA6O60684 536 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 CALML3P27482 149 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 ZAP70P43403 619 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 PPP2R5BQ15173 497 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 CHST3Q7LGC8 479 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 NLRX1Q86UT6 975 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.36□□□□□ -1.55
UBE4A-202ENST00000431736 CCDC12Q8WUD4 166 aaPredicted RBP5.36□□□□□ -1.55
UBE4A-202ENST00000431736 FERMT2Q96AC1 680 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 ZNF215Q9UL58 517 aaPredicted RBP5.36□□□□□ -1.55
UBE4A-202ENST00000431736 POTECB2RU33 542 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 HSP90AA1P07900 732 aaKnown RBP5.36□□□□□ -1.55
UBE4A-202ENST00000431736 PTPRAP18433 802 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 MDM2Q00987 491 aaPredicted RBP5.36□□□□□ -1.55
UBE4A-202ENST00000431736 ABI1Q8IZP0 508 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 TEX13BQ9BXU2 312 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 KRT23Q9C075 422 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 SLKQ9H2G2 1235 aaPredicted RBP5.36□□□□□ -1.55
UBE4A-202ENST00000431736 ACAD9Q9H845 621 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 CNNM2Q9H8M5 875 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 ARMT1Q9H993 441 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 CPT1AP50416 773 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 RASGRF1Q13972 1273 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 HABP4Q5JVS0 413 aaKnown RBP5.36□□□□□ -1.55
UBE4A-202ENST00000431736 ARHGEF16Q5VV41 709 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 SPICE1Q8N0Z3 855 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 DBNDD2Q9BQY9 259 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 VAT1LQ9HCJ6 419 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 DEFB123Q8N688 67 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 C7orf31Q8N865 590 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 SLC44A5Q8NCS7 719 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 UNC93B1Q9H1C4 597 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 ITGB4P16144 1822 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 RNF113AO15541 343 aaKnown RBP5.36□□□□□ -1.55
UBE4A-202ENST00000431736 NR1I2O75469 434 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 BMP3P12645 472 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 SYN1P17600 705 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 STAT2P52630 851 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms