RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 COG6Q9Y2V7 657 aa16.88■□□□□ 0.29
SEC13-211ENST00000431352 MPHOSPH10O00566 681 aaKnown RBP16.87■□□□□ 0.29
SEC13-211ENST00000431352 IFIT2P09913 472 aaKnown RBP16.87■□□□□ 0.29
SEC13-211ENST00000431352 VCAM1P19320 739 aa16.87■□□□□ 0.29
SEC13-211ENST00000431352 SHMT1P34896 483 aa16.87■□□□□ 0.29
SEC13-211ENST00000431352 TTF1Q15361 905 aaPredicted RBP16.87■□□□□ 0.29
SEC13-211ENST00000431352 CCL14Q16627 93 aa16.87■□□□□ 0.29
SEC13-211ENST00000431352 POTEEQ6S8J3 1075 aa16.87■□□□□ 0.29
SEC13-211ENST00000431352 CLASRPQ8N2M8 674 aaKnown RBP16.87■□□□□ 0.29
SEC13-211ENST00000431352 EDC3Q96F86 508 aaKnown RBP16.87■□□□□ 0.29
SEC13-211ENST00000431352 C12orf42Q96LP6 360 aa16.87■□□□□ 0.29
SEC13-211ENST00000431352 CRNKL1Q9BZJ0 848 aaKnown RBP16.87■□□□□ 0.29
SEC13-211ENST00000431352 MCM9Q9NXL9 1143 aa16.87■□□□□ 0.29
SEC13-211ENST00000431352 ZNF532Q9HCE3 1301 aa16.87■□□□□ 0.29
SEC13-211ENST00000431352 USP17L15C9J2P7 530 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 USP17L13C9JLJ4 530 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 USP17L11C9JVI0 530 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 USP17L18D6R9N7 530 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 USP17L22D6RA61 530 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 USP17L17D6RBQ6 530 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 USP17L19D6RCP7 530 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 USP17L20D6RJB6 530 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 RGS2P41220 211 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 USP17L24Q0WX57 530 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 PLEKHH3Q7Z736 793 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 ANKLE1Q8NAG6 615 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 SDR42E1Q8WUS8 393 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 KIF1BPQ96EK5 621 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 APBA2Q99767 749 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 NBPF3Q9H094 633 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 ZMYND8Q9ULU4 1186 aaPredicted RBP16.86■□□□□ 0.29
SEC13-211ENST00000431352 RANBP2P49792 3224 aaKnown RBP16.86■□□□□ 0.29
SEC13-211ENST00000431352 ALPK3Q96L96 1907 aa16.86■□□□□ 0.29
SEC13-211ENST00000431352 HMMRO75330 724 aa16.85■□□□□ 0.29
SEC13-211ENST00000431352 CNMDO75829 334 aa16.85■□□□□ 0.29
SEC13-211ENST00000431352 CYP2D6P10635 497 aa16.85■□□□□ 0.29
SEC13-211ENST00000431352 MS4A1P11836 297 aa16.85■□□□□ 0.29
SEC13-211ENST00000431352 CAPN2P17655 700 aa16.85■□□□□ 0.29
SEC13-211ENST00000431352 USP14P54578 494 aa16.85■□□□□ 0.29
SEC13-211ENST00000431352 SEPT2Q15019 361 aa16.85■□□□□ 0.29
SEC13-211ENST00000431352 MORN1Q5T089 497 aa16.85■□□□□ 0.29
SEC13-211ENST00000431352 MAP3K21Q5TCX8 1036 aa16.85■□□□□ 0.29
SEC13-211ENST00000431352 LCORLQ8N3X6 602 aa16.85■□□□□ 0.29
SEC13-211ENST00000431352 KIAA1683Q9H0B3 1180 aa16.85■□□□□ 0.29
SEC13-211ENST00000431352 PRO3102Q9H379 93 aa16.85■□□□□ 0.29
SEC13-211ENST00000431352 C11orf49Q9H6J7 331 aa16.85■□□□□ 0.29
SEC13-211ENST00000431352 RPAP3Q9H6T3 665 aaPredicted RBP16.85■□□□□ 0.29
SEC13-211ENST00000431352 STAP2Q9UGK3 403 aa16.85■□□□□ 0.29
SEC13-211ENST00000431352 XRCC5P13010 732 aaKnown RBP16.84■□□□□ 0.29
SEC13-211ENST00000431352 CCND3P30281 292 aaPredicted RBP16.84■□□□□ 0.29
SEC13-211ENST00000431352 CCNA1P78396 465 aa16.84■□□□□ 0.29
SEC13-211ENST00000431352 CACNB2Q08289 660 aaPredicted RBP16.84■□□□□ 0.29
SEC13-211ENST00000431352 SLFNL1Q499Z3 407 aa16.84■□□□□ 0.29
SEC13-211ENST00000431352 TMED8Q6PL24 325 aaPredicted RBP16.84■□□□□ 0.29
SEC13-211ENST00000431352 SIRT2Q8IXJ6 389 aa16.84■□□□□ 0.29
SEC13-211ENST00000431352 SLC44A5Q8NCS7 719 aa16.84■□□□□ 0.29
SEC13-211ENST00000431352 ARMT1Q9H993 441 aa16.84■□□□□ 0.29
SEC13-211ENST00000431352 DDX19BQ9UMR2 479 aa16.84■□□□□ 0.29
SEC13-211ENST00000431352 RABGAP1Q9Y3P9 1069 aa16.84■□□□□ 0.29
SEC13-211ENST00000431352 SYN1P17600 705 aa16.83■□□□□ 0.28
SEC13-211ENST00000431352 GUCY1A2P33402 732 aa16.83■□□□□ 0.28
SEC13-211ENST00000431352 MNX1P50219 401 aaPredicted RBP16.83■□□□□ 0.28
SEC13-211ENST00000431352 CATSPERGQ6ZRH7 1159 aa16.83■□□□□ 0.28
SEC13-211ENST00000431352 RPAP2Q8IXW5 612 aaPredicted RBP16.83■□□□□ 0.28
SEC13-211ENST00000431352 TRMT44Q8IYL2 757 aaKnown RBP16.83■□□□□ 0.28
SEC13-211ENST00000431352 USP6NLQ92738 828 aa16.83■□□□□ 0.28
SEC13-211ENST00000431352 BOLA2Q9H3K6 86 aa16.83■□□□□ 0.28
SEC13-211ENST00000431352 OGDHLQ9ULD0 1010 aa16.83■□□□□ 0.28
SEC13-211ENST00000431352 TCRBV5S4A2TA0A5A2 114 aa16.82■□□□□ 0.28
SEC13-211ENST00000431352 SPDYE16A6NNV3 312 aaPredicted RBP16.82■□□□□ 0.28
SEC13-211ENST00000431352 GLRX3O76003 335 aaKnown RBP16.82■□□□□ 0.28
SEC13-211ENST00000431352 MBD4O95243 580 aa16.82■□□□□ 0.28
SEC13-211ENST00000431352 GABPAQ06546 454 aa16.82■□□□□ 0.28
SEC13-211ENST00000431352 MAP2K5Q13163 448 aa16.82■□□□□ 0.28
SEC13-211ENST00000431352 CLEC10AQ8IUN9 316 aa16.82■□□□□ 0.28
SEC13-211ENST00000431352 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.82■□□□□ 0.28
SEC13-211ENST00000431352 DYNLL2Q96FJ2 89 aa16.82■□□□□ 0.28
SEC13-211ENST00000431352 TANGO6Q9C0B7 1094 aa16.82■□□□□ 0.28
SEC13-211ENST00000431352 DCP1AQ9NPI6 582 aaPredicted RBP16.82■□□□□ 0.28
SEC13-211ENST00000431352 ZBTB40Q9NUA8 1239 aa16.82■□□□□ 0.28
SEC13-211ENST00000431352 PAG1Q9NWQ8 432 aa16.82■□□□□ 0.28
SEC13-211ENST00000431352 BTBD7Q9P203 1132 aa16.82■□□□□ 0.28
SEC13-211ENST00000431352 PRKAB2O43741 272 aa16.81■□□□□ 0.28
SEC13-211ENST00000431352 FLRT1Q9NZU1 646 aa16.81■□□□□ 0.28
SEC13-211ENST00000431352 IVNS1ABPQ9Y6Y0 642 aa16.81■□□□□ 0.28
SEC13-211ENST00000431352 PFASO15067 1338 aa16.8■□□□□ 0.28
SEC13-211ENST00000431352 SZT2Q5T011 3432 aa16.8■□□□□ 0.28
SEC13-211ENST00000431352 A0A1W2PRG0 241 aa16.8■□□□□ 0.28
SEC13-211ENST00000431352 SOX1O00570 391 aaPredicted RBP16.8■□□□□ 0.28
SEC13-211ENST00000431352 RAB11FIP3O75154 756 aa16.8■□□□□ 0.28
SEC13-211ENST00000431352 CHGBP05060 677 aa16.8■□□□□ 0.28
SEC13-211ENST00000431352 MFSD14CQ5VZR4 134 aa16.8■□□□□ 0.28
SEC13-211ENST00000431352 SAMD1Q6SPF0 538 aaPredicted RBP16.8■□□□□ 0.28
SEC13-211ENST00000431352 CYP2D7A0A087X1C5 515 aa16.79■□□□□ 0.28
SEC13-211ENST00000431352 SLC15A5A6NIM6 579 aa16.79■□□□□ 0.28
SEC13-211ENST00000431352 AKR1B1P15121 316 aa16.79■□□□□ 0.28
SEC13-211ENST00000431352 PTPREP23469 700 aa16.79■□□□□ 0.28
SEC13-211ENST00000431352 CNGA1P29973 690 aa16.79■□□□□ 0.28
SEC13-211ENST00000431352 ADD2P35612 726 aa16.79■□□□□ 0.28
SEC13-211ENST00000431352 LBX2Q6XYB7 198 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms