RNA–Protein interactions for RNA: ENST00000431275.1

SPTLC3-202, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 2

Gene SPTLC3, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-202ENST00000431275 ANKRD23Q86SG2 305 aa13.18□□□□□ -0.3
SPTLC3-202ENST00000431275 SIAH1Q8IUQ4 282 aa13.18□□□□□ -0.3
SPTLC3-202ENST00000431275 MAP4K1Q92918 833 aa13.18□□□□□ -0.3
SPTLC3-202ENST00000431275 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.18□□□□□ -0.3
SPTLC3-202ENST00000431275 NBPF3Q9H094 633 aa13.18□□□□□ -0.3
SPTLC3-202ENST00000431275 KANSL2Q9H9L4 492 aa13.18□□□□□ -0.3
SPTLC3-202ENST00000431275 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
SPTLC3-202ENST00000431275 ATAD5Q96QE3 1844 aa13.18□□□□□ -0.3
SPTLC3-202ENST00000431275 A0A1W2PRG0 241 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 PDHXO00330 501 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 ORC4O43929 436 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 TSPY3P0CV98 308 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 TSPY8P0CW00 308 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 CTCFP49711 727 aaPredicted RBP13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 DGKZQ13574 1117 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 IMMTQ16891 758 aaKnown RBP13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 FAM47AQ5JRC9 791 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 AKNAD1Q5T1N1 836 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 USP17L2Q6R6M4 530 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 MFSD6Q6ZSS7 791 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 CLEC10AQ8IUN9 316 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 PROCA1Q8NCQ7 364 aaPredicted RBP13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 NEDD1Q8NHV4 660 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 STAG1Q8WVM7 1258 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 CFHR5Q9BXR6 569 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 LSG1Q9H089 658 aaKnown RBP13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 KIAA1683Q9H0B3 1180 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 ZCCHC17Q9NP64 241 aaKnown RBP13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 EMILIN3Q9NT22 766 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 PHIPQ8WWQ0 1821 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 LAMB1P07942 1786 aa13.17□□□□□ -0.3
SPTLC3-202ENST00000431275 IGKV6D-41A0A0C4DH26 115 aa13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 RANBP6O60518 1105 aaKnown RBP13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 HSPA8P11142 646 aaKnown RBP13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 EEF2P13639 858 aaKnown RBP13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 ICA1Q05084 483 aa13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 TAF1CQ15572 869 aaPredicted RBP13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 ZYXQ15942 572 aaKnown RBP13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 TREML2Q5T2D2 321 aa13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 TBC1D10CQ8IV04 446 aa13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 FEZ1Q99689 392 aa13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 R3HDMLQ9H3Y0 253 aa13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 RNF41Q9H4P4 317 aaPredicted RBP13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 ARHGEF10LQ9HCE6 1279 aa13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 TOMM22Q9NS69 142 aa13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 TMOD4Q9NZQ9 345 aa13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 AGTPBP1Q9UPW5 1226 aa13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 U3KPZ7 1027 aaPredicted RBP13.16□□□□□ -0.3
SPTLC3-202ENST00000431275 TSPY2A6NKD2 308 aa13.15□□□□□ -0.3
SPTLC3-202ENST00000431275 PCP11498 1178 aaKnown RBP13.15□□□□□ -0.3
SPTLC3-202ENST00000431275 LBX1P52954 281 aa13.15□□□□□ -0.3
SPTLC3-202ENST00000431275 USP14P54578 494 aa13.15□□□□□ -0.3
SPTLC3-202ENST00000431275 ATP2B2Q01814 1243 aa13.15□□□□□ -0.3
SPTLC3-202ENST00000431275 CRHR2Q13324 411 aa13.15□□□□□ -0.3
SPTLC3-202ENST00000431275 RRP12Q5JTH9 1297 aaKnown RBP13.15□□□□□ -0.3
SPTLC3-202ENST00000431275 C12orf42Q96LP6 360 aa13.15□□□□□ -0.3
SPTLC3-202ENST00000431275 ZFYVE28Q9HCC9 887 aa13.15□□□□□ -0.3
SPTLC3-202ENST00000431275 ANO2Q9NQ90 1003 aa13.15□□□□□ -0.3
SPTLC3-202ENST00000431275 NYAP2Q9P242 653 aa13.15□□□□□ -0.3
SPTLC3-202ENST00000431275 SLC45A1Q9Y2W3 748 aa13.15□□□□□ -0.3
SPTLC3-202ENST00000431275 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
SPTLC3-202ENST00000431275 RBM8AQ9Y5S9 174 aaKnown RBP13.15□□□□□ -0.3
SPTLC3-202ENST00000431275 CYP21A2P08686 494 aa13.14□□□□□ -0.31
SPTLC3-202ENST00000431275 PABPC4Q13310 644 aaKnown RBP eCLIP13.14□□□□□ -0.31
SPTLC3-202ENST00000431275 NKX2-3Q8TAU0 364 aa13.14□□□□□ -0.31
SPTLC3-202ENST00000431275 CEP95Q96GE4 821 aa13.14□□□□□ -0.31
SPTLC3-202ENST00000431275 SH2D4AQ9H788 454 aa13.14□□□□□ -0.31
SPTLC3-202ENST00000431275 MTMR4Q9NYA4 1195 aa13.14□□□□□ -0.31
SPTLC3-202ENST00000431275 CLIP2Q9UDT6 1046 aa13.14□□□□□ -0.31
SPTLC3-202ENST00000431275 PLIN4Q96Q06 1357 aa13.13□□□□□ -0.31
SPTLC3-202ENST00000431275 GPR25O00155 361 aa13.13□□□□□ -0.31
SPTLC3-202ENST00000431275 CYP2C8P10632 490 aa13.13□□□□□ -0.31
SPTLC3-202ENST00000431275 HOXA7P31268 230 aaPredicted RBP13.13□□□□□ -0.31
SPTLC3-202ENST00000431275 MKL1Q969V6 931 aa13.13□□□□□ -0.31
SPTLC3-202ENST00000431275 IL17RBQ9NRM6 502 aa13.13□□□□□ -0.31
SPTLC3-202ENST00000431275 MYH8P13535 1937 aa13.13□□□□□ -0.31
SPTLC3-202ENST00000431275 NEDD4P46934 1319 aa13.13□□□□□ -0.31
SPTLC3-202ENST00000431275 B4E1Z4 1266 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 NMT2O60551 498 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 TLR2O60603 784 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 TTLL1O95922 423 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 OSBPP22059 807 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 NT5C2P49902 561 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 NECTIN1Q15223 517 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 NOM1Q5C9Z4 860 aaKnown RBP13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 KIAA1755Q5JYT7 1200 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 ESR2Q92731 530 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 PARK7Q99497 189 aaKnown RBP13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 KRT23Q9C075 422 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 VCPKMTQ9H867 229 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 CNNM2Q9H8M5 875 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 TCP11L1Q9NUJ3 509 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 PNMA3Q9UL41 463 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 GTF3C3Q9Y5Q9 886 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 TAF6LQ9Y6J9 622 aa13.12□□□□□ -0.31
SPTLC3-202ENST00000431275 USP17L15C9J2P7 530 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 USP17L13C9JLJ4 530 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 USP17L11C9JVI0 530 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 USP17L18D6R9N7 530 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 USP17L22D6RA61 530 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms