RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 EVX2Q03828 476 aa12.27□□□□□ -0.45
HMGN1P38-201ENST00000431116 U2AF1L4Q8WU68 220 aaKnown RBP12.27□□□□□ -0.45
HMGN1P38-201ENST00000431116 HAUS7Q99871 368 aa12.27□□□□□ -0.45
HMGN1P38-201ENST00000431116 TXNRD2Q9NNW7 524 aa12.27□□□□□ -0.45
HMGN1P38-201ENST00000431116 CABP5Q9NP86 173 aa12.27□□□□□ -0.45
HMGN1P38-201ENST00000431116 DCP1AQ9NPI6 582 aaPredicted RBP12.27□□□□□ -0.45
HMGN1P38-201ENST00000431116 CYP2D6P10635 497 aa12.26□□□□□ -0.45
HMGN1P38-201ENST00000431116 USP14P54578 494 aa12.26□□□□□ -0.45
HMGN1P38-201ENST00000431116 SLFNL1Q499Z3 407 aa12.26□□□□□ -0.45
HMGN1P38-201ENST00000431116 GPRC5AQ8NFJ5 357 aa12.26□□□□□ -0.45
HMGN1P38-201ENST00000431116 GTF3C2Q8WUA4 911 aaPredicted RBP12.26□□□□□ -0.45
HMGN1P38-201ENST00000431116 GCC1Q96CN9 775 aa12.26□□□□□ -0.45
HMGN1P38-201ENST00000431116 C12orf42Q96LP6 360 aa12.26□□□□□ -0.45
HMGN1P38-201ENST00000431116 PAGR1Q9BTK6 254 aa12.26□□□□□ -0.45
HMGN1P38-201ENST00000431116 SSUH2Q9Y2M2 353 aa12.26□□□□□ -0.45
HMGN1P38-201ENST00000431116 MPHOSPH10O00566 681 aaKnown RBP12.25□□□□□ -0.45
HMGN1P38-201ENST00000431116 PRKAB2O43741 272 aa12.25□□□□□ -0.45
HMGN1P38-201ENST00000431116 FARP2O94887 1054 aaPredicted RBP12.25□□□□□ -0.45
HMGN1P38-201ENST00000431116 HMGCRP04035 888 aa12.25□□□□□ -0.45
HMGN1P38-201ENST00000431116 CHGBP05060 677 aa12.25□□□□□ -0.45
HMGN1P38-201ENST00000431116 VCAM1P19320 739 aa12.25□□□□□ -0.45
HMGN1P38-201ENST00000431116 GABPAQ06546 454 aa12.25□□□□□ -0.45
HMGN1P38-201ENST00000431116 SLC44A5Q8NCS7 719 aa12.25□□□□□ -0.45
HMGN1P38-201ENST00000431116 ACER1Q8TDN7 264 aa12.25□□□□□ -0.45
HMGN1P38-201ENST00000431116 DEFB118Q96PH6 123 aa12.25□□□□□ -0.45
HMGN1P38-201ENST00000431116 KIAA1683Q9H0B3 1180 aa12.25□□□□□ -0.45
HMGN1P38-201ENST00000431116 RBPJLQ9UBG7 517 aa12.25□□□□□ -0.45
HMGN1P38-201ENST00000431116 A0A0G2JMZ2 1700 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 USP17L15C9J2P7 530 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 USP17L13C9JLJ4 530 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 USP17L11C9JVI0 530 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 USP17L18D6R9N7 530 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 USP17L22D6RA61 530 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 USP17L17D6RBQ6 530 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 USP17L19D6RCP7 530 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 USP17L20D6RJB6 530 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 SGPL1O95470 568 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 MAPK4P31152 587 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 GUCY1A2P33402 732 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 ERVK-9P63128 1117 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 ERVK-24P63145 666 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 USP17L24Q0WX57 530 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 SEPT2Q15019 361 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 UBE3CQ15386 1083 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 PARP14Q460N5 1801 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 CCAR1Q8IX12 1150 aaKnown RBP12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 PAK6Q9NQU5 681 aaPredicted RBP12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 ECHDC1Q9NTX5 307 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 SWAP70Q9UH65 585 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 GJD2Q9UKL4 321 aa12.24□□□□□ -0.45
HMGN1P38-201ENST00000431116 TRIOBPQ9H2D6 2365 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 ALPK3Q96L96 1907 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 CYP2B6P20813 491 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 ZSCAN25Q6NSZ9 544 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 POTEEQ6S8J3 1075 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 UBE2Q1Q7Z7E8 422 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 AMOTL1Q8IY63 956 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 SOCS4Q8WXH5 440 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 TRIB2Q92519 343 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 DYNLL2Q96FJ2 89 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 DDRGK1Q96HY6 314 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 GPATCH3Q96I76 525 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 NUDT12Q9BQG2 462 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 PORCNQ9H237 461 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 DCTPP1Q9H773 170 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 CWC22Q9HCG8 908 aaKnown RBP12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 MKI67P46013 3256 aaKnown RBP12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 RLFQ13129 1914 aa12.23□□□□□ -0.45
HMGN1P38-201ENST00000431116 CYP2D7A0A087X1C5 515 aa12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 H0YGN5 161 aa12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 TFRCP02786 760 aaKnown RBP12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 TRIM32Q13049 653 aa12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 Q3C1V9 767 aa12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 TSHZ3Q63HK5 1081 aa12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 CATSPERGQ6ZRH7 1159 aa12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 TMEM179Q6ZVK1 233 aa12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 GPR142Q7Z601 462 aa12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 CLEC10AQ8IUN9 316 aa12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 DPF3Q92784 378 aa12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 HTATIP2Q9BUP3 242 aa12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 PUS7LQ9H0K6 701 aaKnown RBP12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 RPAP3Q9H6T3 665 aaPredicted RBP12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 ATP8A2Q9NTI2 1148 aa12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 SLC4A4Q9Y6R1 1079 aa12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 FRMPD3Q5JV73 1810 aa12.22□□□□□ -0.45
HMGN1P38-201ENST00000431116 GREB1LQ9C091 1923 aaPredicted RBP12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 A0A1W2PRG0 241 aa12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 SPDYE16A6NNV3 312 aaPredicted RBP12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 SMIM22K7EJ46 135 aa12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 CNMDO75829 334 aa12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 PRKAR2AP13861 404 aaKnown RBP12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 AKR1B1P15121 316 aa12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 ZKSCAN1P17029 563 aaPredicted RBP12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 RGS2P41220 211 aa12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 CCNA1P78396 465 aa12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 HABP4Q5JVS0 413 aaKnown RBP12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 WDR78Q5VTH9 848 aa12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 CHRDL2Q6WN34 429 aa12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 PLEKHH3Q7Z736 793 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms